Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0063
(681 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 228 3e-60
At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 226 9e-60
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 82 4e-16
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 79 3e-15
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 34 0.076
At1g80910.1 68414.m09493 expressed protein 34 0.10
At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone... 32 0.31
At1g16020.2 68414.m01922 expressed protein 32 0.40
At1g16020.1 68414.m01921 expressed protein 32 0.40
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 31 0.93
At3g57570.1 68416.m06410 expressed protein 30 1.6
At3g62170.1 68416.m06985 pectinesterase family protein contains ... 28 5.0
At4g16146.1 68417.m02449 expressed protein 28 6.6
At4g28395.1 68417.m04064 lipid transfer protein, putative identi... 27 8.7
>At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)
identical to SP|Q96291 2-cys peroxiredoxin BAS1,
chloroplast precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 266
Score = 228 bits (557), Expect = 3e-60
Identities = 110/193 (56%), Positives = 141/193 (73%), Gaps = 2/193 (1%)
Frame = +1
Query: 34 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 210
+PL K AP F+A AV + EF + LSDY GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 72 LPLVGNK-APDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRH 130
Query: 211 DEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEET 390
EF K+ EVLG S DS F+HLAW+ T RK GGLG +N PLISD + IS+ +GVL +
Sbjct: 131 SEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQ 190
Query: 391 GIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPANWRPGAK 567
GI RGLFIID + ++ TIN+L +GRSV+ET+R +QA Q+ ++ EVCPA W+PG K
Sbjct: 191 GIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYIQENPDEVCPAGWKPGEK 250
Query: 568 TIKPDTKAAQEYF 606
++KPD K ++EYF
Sbjct: 251 SMKPDPKLSKEYF 263
>At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative
very strong similarity to SP|Q96291 2-cys peroxiredoxin
BAS1, chloroplast precursor {Arabidopsis thaliana};
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 273
Score = 226 bits (553), Expect = 9e-60
Identities = 108/193 (55%), Positives = 142/193 (73%), Gaps = 2/193 (1%)
Frame = +1
Query: 34 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 210
+PL K AP F+A AV + EF + LS+Y GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 79 LPLVGNK-APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRY 137
Query: 211 DEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEET 390
+EF K+ EVLG S DS F+HLAW+ T RK GGLG +N PL+SD + IS+ +GVL +
Sbjct: 138 EEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQ 197
Query: 391 GIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPANWRPGAK 567
GI RGLFIID + ++ TIN+L +GRSV+ET+R +QA Q+ ++ EVCPA W+PG K
Sbjct: 198 GIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYVQENPDEVCPAGWKPGEK 257
Query: 568 TIKPDTKAAQEYF 606
++KPD K ++EYF
Sbjct: 258 SMKPDPKLSKEYF 270
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 81.8 bits (193), Expect = 4e-16
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Frame = +1
Query: 112 LSDY-KGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWIN 288
L DY + VLF +P DFT VC TE+ A ++ A EF K G ++LG S D +H WI
Sbjct: 24 LHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIK 83
Query: 289 TPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITINDLPV 468
+N P+I+D + I ++D P R L I+ ++ +
Sbjct: 84 DIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENGPSRALHIVGPDSKIKLSFLYPSTT 143
Query: 469 GRSVEETLRLVQAFQFTDKHGE--VCPANWRP 558
GR+++E LR + + KH P NW+P
Sbjct: 144 GRNMDEVLRALDSLLMASKHNNKIATPVNWKP 175
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 79.0 bits (186), Expect = 3e-15
Identities = 44/137 (32%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Frame = +1
Query: 100 KDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLA 279
K +SL YKGK VVL+FYP D T C + AF + ++F+K G EV+G S D +H A
Sbjct: 86 KPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSASHKA 145
Query: 280 WINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITIN 456
+ + + + L+SD+ +++ +D+GV + G +P R +++D ++ I N
Sbjct: 146 FASKYK-------LPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVLDKNGVVQLIYNN 198
Query: 457 DLPVGRSVEETLRLVQA 507
+ ++ETL+ ++A
Sbjct: 199 QFQPEKHIDETLKFLKA 215
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 34.3 bits (75), Expect = 0.076
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 85 VNGEFKDISLSD-YKGKYVVLFFYPLDFTFVCPTE-IIAFSEKADEFRKIGCE-VLGAST 255
V+ +F LSD +KGK VV+F P +T VC + + ++ D+F+ G + V+ S
Sbjct: 58 VSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSV 117
Query: 256 DSHFTHLAW 282
+ F W
Sbjct: 118 NDPFAINGW 126
>At1g80910.1 68414.m09493 expressed protein
Length = 497
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Frame = +1
Query: 103 DISLSDYKGKYV--VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDS 261
D+ ++G+ + +LFFYP D TF +I SE F ++ CEV+ A S
Sbjct: 19 DLRRGQHEGQELDKILFFYPPDLTFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHS 78
Query: 262 H 264
H
Sbjct: 79 H 79
>At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone
isomerase (CHI) identical to SP|P41088
Length = 246
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -2
Query: 557 GLQLAGHTSPCLSVNWKACTSRRVSSTDLPTGRSLIVICLRFCLSSMMKSPRKGMPVSSS 378
G+ L G+ P LSV WK T+ ++ + +P R ++ + MK P G S
Sbjct: 62 GVYLEGNAVPSLSVKWKGKTTEELTES-IPFFREIVTGAFEKFIKVTMKLPLTGQQYSEK 120
Query: 377 ST 372
T
Sbjct: 121 VT 122
>At1g16020.2 68414.m01922 expressed protein
Length = 502
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +1
Query: 139 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 264
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At1g16020.1 68414.m01921 expressed protein
Length = 515
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +1
Query: 139 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 264
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 30.7 bits (66), Expect = 0.93
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 516 HGQARRGVPRQLEARRQDHQARHQGRPGVLRRRQLDTTPHQQ 641
H Q ++ +Q + ++Q Q +HQ +P +++Q T HQQ
Sbjct: 134 HHQQQQQQQQQQQQQQQQQQQQHQNQPPSQQQQQQSTPQHQQ 175
>At3g57570.1 68416.m06410 expressed protein
Length = 1057
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 557 GLQLAGHTSPCLSVNWKACTSRRVSSTDLPTGRSLIVICLRFCLSSMMKSPRKGMPVSSS 378
G + +T CL + C+S STD+ T + + I R C+++++ S + P SS
Sbjct: 875 GYSVLDYTIHCLIEDRSNCSSIPKLSTDILTCENPLPIPFRLCMANVIISACQKNPESSK 934
Query: 377 ST 372
T
Sbjct: 935 KT 936
>At3g62170.1 68416.m06985 pectinesterase family protein contains
Pfam profiles: PF01095 pectinesterase, PF04043 plant
invertase/pectin methylesterase inhibitor ;similar to
pollen-specific pectin esterase GI:1620652 from
[Brassica rapa subsp. pekinensis]
Length = 588
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 138 NIFPLVVRQRNVLELSVDDGRGLELGSGFGHLQRHLVETKD 16
+IF VV + + VDD + + +G+G G R L+E D
Sbjct: 192 DIFHSVVTAMAQMGVKVDDMKNITMGAGAGGAARRLLEDND 232
>At4g16146.1 68417.m02449 expressed protein
Length = 102
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 298 KQGGLGPMNIPLISDKSHRI---SRDYGVLDEETGIPFRGLFIID 423
K GGL P PLIS S R S D+ +L +E I R + I+
Sbjct: 25 KYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQRTIAAIE 69
>At4g28395.1 68417.m04064 lipid transfer protein, putative identical
to anther-specific gene ATA7 [gi:2746339]; contains Pfam
protease inhibitor/seed storage/LTP family domain
Length = 180
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 356 MRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCES 255
M C + + G+F PSP C RGV VK S
Sbjct: 77 MPC-MGFVEGIFQQPSPDCCRGVTHLNNVVKFTS 109
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,151,324
Number of Sequences: 28952
Number of extensions: 238662
Number of successful extensions: 954
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -