Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0125
(694 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 186 2e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 185 2e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 185 2e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 184 7e-47
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 184 7e-47
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 184 7e-47
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 184 7e-47
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 183 1e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 183 1e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 166 1e-41
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 160 7e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 160 9e-40
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 113 1e-25
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 96 2e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 85 6e-17
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 70 2e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 3e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 58 4e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 51 8e-07
At1g76930.2 68414.m08956 proline-rich extensin-like family prote... 34 0.078
At1g76930.1 68414.m08955 proline-rich extensin-like family prote... 34 0.078
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.10
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 32 0.41
At5g18270.2 68418.m02148 no apical meristem (NAM) family protein... 31 0.73
At5g18270.1 68418.m02147 no apical meristem (NAM) family protein... 31 0.73
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 30 1.7
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 30 1.7
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 30 1.7
At1g27595.1 68414.m03365 expressed protein similar to Symplekin ... 30 1.7
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 2.1
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 2.9
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 2.9
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 2.9
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.9
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.9
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 5.1
At3g28790.1 68416.m03593 expressed protein 28 5.1
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.9
At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive eff... 27 8.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 186 bits (452), Expect = 2e-47
Identities = 94/127 (74%), Positives = 97/127 (76%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFNTPAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 107 bits (256), Expect = 9e-24
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 185 bits (451), Expect = 2e-47
Identities = 94/127 (74%), Positives = 96/127 (75%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFNTPAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 107 bits (256), Expect = 9e-24
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 185 bits (451), Expect = 2e-47
Identities = 94/127 (74%), Positives = 96/127 (75%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFNTPAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 107 bits (256), Expect = 9e-24
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 184 bits (447), Expect = 7e-47
Identities = 93/127 (73%), Positives = 96/127 (75%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFN PAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 107 bits (256), Expect = 9e-24
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 184 bits (447), Expect = 7e-47
Identities = 91/127 (71%), Positives = 97/127 (76%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFN+PAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 102 bits (245), Expect = 2e-22
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQ 61
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 184 bits (447), Expect = 7e-47
Identities = 91/127 (71%), Positives = 97/127 (76%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFN+PAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 102 bits (245), Expect = 2e-22
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQ 61
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 184 bits (447), Expect = 7e-47
Identities = 91/127 (71%), Positives = 97/127 (76%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFN+PAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 102 bits (245), Expect = 2e-22
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQ 61
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 92/127 (72%), Positives = 95/127 (74%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFN PAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 107 bits (256), Expect = 9e-24
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 92/127 (72%), Positives = 95/127 (74%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFN PAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 107 bits (256), Expect = 9e-24
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 166 bits (404), Expect = 1e-41
Identities = 81/127 (63%), Positives = 92/127 (72%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMT 123
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFE+F P+MY+ IQAVLSLY+SG S P P LRLD
Sbjct: 124 QIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 183
Query: 610 GPVRDLT 630
RDLT
Sbjct: 184 AG-RDLT 189
Score = 101 bits (242), Expect = 5e-22
Identities = 44/57 (77%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQ 62
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 160 bits (389), Expect = 7e-40
Identities = 86/145 (59%), Positives = 96/145 (66%)
Frame = +1
Query: 196 RDGRYGTEGLLCRR*GTEQKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 375
RDG E + G + ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 376 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTP 555
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SG S
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 556 CPSTRDTHSPTPSLRLDFGPVRDLT 630
P P LRLD G RDLT
Sbjct: 154 VPVYEGYALPHGILRLDLGG-RDLT 177
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +2
Query: 92 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE 241
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEE 48
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 160 bits (388), Expect = 9e-40
Identities = 76/119 (63%), Positives = 89/119 (74%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
+ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMT
Sbjct: 18 RSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMT 77
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLD 606
QIMFETF P+MY+ +QA LSL+ASG + S P + P LRLD
Sbjct: 78 QIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLD 136
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 113 bits (272), Expect = 1e-25
Identities = 47/89 (52%), Positives = 64/89 (71%)
Frame = +1
Query: 244 TEQKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 423
+E + L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 424 MTQIMFETFNTPAMYVAIQAVLSLYASGL 510
M + MFE +N +++ IQAVL+LYA GL
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQGL 148
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +2
Query: 92 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 238
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
Score = 44.8 bits (101), Expect = 6e-05
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 513 TGIVLDSGDGVFHTVPIYEGYALPH 587
TG+V+DSGDGV H VP+ +GY+ PH
Sbjct: 150 TGLVIDSGDGVTHVVPVVDGYSFPH 174
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/86 (50%), Positives = 57/86 (66%)
Frame = +1
Query: 268 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 447
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 448 FNTPAMYVAIQAVLSLYASGLPPVSC 525
FN P +Y+A+ +VL+L A+G C
Sbjct: 146 FNVPGLYIAVNSVLAL-AAGYTTSKC 170
Score = 36.3 bits (80), Expect = 0.019
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 513 TGIVLDSGDGVFHTVPIYEGYALPHAI 593
TG+V+D GDG H VP+ EGY + I
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCI 199
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 89 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 175
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 84.6 bits (200), Expect = 6e-17
Identities = 35/77 (45%), Positives = 53/77 (68%)
Frame = +1
Query: 277 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 456
PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 457 PAMYVAIQAVLSLYASG 507
PA+++A VL+ +A+G
Sbjct: 154 PALFMAKNPVLTSFATG 170
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 178
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 513 TGIVLDSGDGVFHTVPIYEGYALPHAILASGL 608
T +V+D G G P+++GY L A+++S L
Sbjct: 173 TSLVVDCGGGSTTISPVHDGYVLQKAVVSSPL 204
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 69.7 bits (163), Expect = 2e-12
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 277 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 453
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 454 TPAMYVAIQAVLSLYASG 507
Y + QAVLSLYA G
Sbjct: 117 VSGFYASEQAVLSLYAVG 134
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 89 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 181
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/71 (45%), Positives = 44/71 (61%)
Frame = +1
Query: 211 GTEGLLCRR*GTEQKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 390
G++ L RR +Q IL+ P + GIVT+WD ++ +W H F N L + P EHP+LL E
Sbjct: 72 GSQALNFRR---DQMEILS---PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAE 125
Query: 391 APLNPKANREK 423
PLN + REK
Sbjct: 126 PPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 178
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 58.4 bits (135), Expect = 4e-09
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 268 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 447
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 448 FNTPAMYVA-IQAVLSLYASGLPPVS 522
F ++Y+A Q+++ LY + P S
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDS 146
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 92 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 184
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 435 HVRNIQHARHVRRHPSRALAVRVRSTTGIVLDSGDGVFHTVPIYEGYALPHAI 593
H +++ H R P L+ ++ +V+D G H VP+ + L HAI
Sbjct: 130 HPQSLVHLYEASRQPDSILS---KTQCSLVVDCGFSFTHAVPVLHNFTLNHAI 179
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 50.8 bits (116), Expect = 8e-07
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +1
Query: 277 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 453
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 454 TPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHS 582
PA+ + A S + L + C V CP THS
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGI-CKKDGIVL---CPGFTTTHS 183
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 92 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 238
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At1g76930.2 68414.m08956 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 256
Score = 34.3 bits (75), Expect = 0.078
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 496 YASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDFGPVRDLTRLPSWKNPSP 660
Y+S PPV ++P V +P P + +SP P + PV+ + P +K+P P
Sbjct: 27 YSSPPPPVKHYSPPPVYKSPPPPVKH-YSPPPVYKSPPPPVKHYSPPPVYKSPPP 80
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 493 LYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDFGPVRDLTRLPSWKNPSP 660
+Y S PPV ++P V +P P + +SP P + PV+ + P +K+P P
Sbjct: 98 VYKSPPPPVKHYSPPPVYKSPPPPVKH-YSPPPVYKSPPPPVKHYSPPPVYKSPPP 152
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 448 FNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDFGPVRDL 627
++ P +Y + + Y+ PPV P V +P P + +SP P + PV+
Sbjct: 69 YSPPPVYKSPPPPVKYYSP--PPVYKSPPPPVYKSPPPPVKH-YSPPPVYKSPPPPVKHY 125
Query: 628 TRLPSWKNPSP 660
+ P +K+P P
Sbjct: 126 SPPPVYKSPPP 136
>At1g76930.1 68414.m08955 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 293
Score = 34.3 bits (75), Expect = 0.078
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 496 YASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDFGPVRDLTRLPSWKNPSP 660
Y+S PPV ++P V +P P + +SP P + PV+ + P +K+P P
Sbjct: 27 YSSPPPPVKHYSPPPVYKSPPPPVKH-YSPPPVYKSPPPPVKHYSPPPVYKSPPP 80
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 493 LYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDFGPVRDLTRLPSWKNPSP 660
+Y S PPV ++P V +P P + +SP P + PV+ + P +K+P P
Sbjct: 98 VYKSPPPPVKHYSPPPVYKSPPPPVKH-YSPPPVYKSPPPPVKHYSPPPVYKSPPP 152
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 448 FNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDFGPVRDL 627
++ P +Y + + Y+ PPV P V +P P + +SP P + PV+
Sbjct: 69 YSPPPVYKSPPPPVKYYSP--PPVYKSPPPPVYKSPPPPVKH-YSPPPVYKSPPPPVKHY 125
Query: 628 TRLPSWKNPSP 660
+ P +K+P P
Sbjct: 126 SPPPVYKSPPP 136
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 213 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 76
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 502 SGLPPVSCWTPATVSSTPCPSTRDTHSPTPS 594
+ LPPV+ TP+ ++S P P T +PT S
Sbjct: 36 TALPPVTAETPSPIASPPVPVNEPTPAPTTS 66
>At5g18270.2 68418.m02148 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 31.1 bits (67), Expect = 0.73
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 289 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 462
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 463 MYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPT 588
I +L S LPP+ P+ +S T P+ + + PT
Sbjct: 195 SLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPPT 232
>At5g18270.1 68418.m02147 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 31.1 bits (67), Expect = 0.73
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 289 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 462
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 463 MYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPT 588
I +L S LPP+ P+ +S T P+ + + PT
Sbjct: 195 SLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPPT 232
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 511 PPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDFGPVRDLTRLPSWKNPSPEP 666
PP TP+ S TP P + +PTPS+ PV P+ PSP P
Sbjct: 99 PPPPTPTPSVPSPTP-PVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTP 149
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 511 PPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDFGPVRDLTRLPSWKNPSPEP 666
PP TP+ S TP P + +PTPS+ PV P+ PSP P
Sbjct: 117 PPPPTPTPSVPSPTP-PVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTP 167
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 508 LPPVSCW--TPATVSSTPCPSTRDTHSPTPSLRLDFGPVRDLTRLPSWKNPSPEP 666
+PPVS TP+ S TP P + +PTPS+ PV P+ PSP P
Sbjct: 78 VPPVSPPPPTPSVPSPTP-PVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTP 131
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 511 PPVSCWTPATVSSTPCPSTRDTHSPTP 591
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 511 PPVSCWTPATVSSTPCPSTRDTHSPTP 591
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At1g27595.1 68414.m03365 expressed protein similar to Symplekin
(SP:Q92797) {Homo sapiens}
Length = 1091
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +1
Query: 457 PAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDT-HSPTPSLRLDFGPV----R 621
P M I + PP + AT + S+ +T HSPTP +L F P+
Sbjct: 243 PDMLADIVITSMKHLPSTPPTLASSVATPADIVVSSSTNTVHSPTPPAQLPFDPILPAGS 302
Query: 622 DLTRLPSWKNPSPEPR 669
+ +PS + +PR
Sbjct: 303 SFSEVPSLSSSVADPR 318
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 2.1
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 189 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 103
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 2.1
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -2
Query: 378 DGVFLGGDTQLIVEGMMPNLLHVIPVS 298
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +1
Query: 334 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 483
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 484 VLSLYAS 504
VL+LYA+
Sbjct: 241 VLALYAA 247
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +1
Query: 334 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 483
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 484 VLSLYAS 504
VL+LYA+
Sbjct: 241 VLALYAA 247
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +1
Query: 511 PPVSCWTPATVSSTPCPSTRDTHSPTPSLRLD----FGPVRDLTRLPSWKNPSPEP 666
PP+ TP + P PS+ T PTPS D PV+ T + S PS EP
Sbjct: 648 PPMGAPTP---TQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQS-STPSSEP 699
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 262 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 423
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 262 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 423
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 390 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 491
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 502 SGLPPVSCWTPATVS-STPCPSTRDTHSPTPS 594
S P S TP+T + STP PST +PTPS
Sbjct: 278 SPTPTPSTPTPSTPTPSTPTPSTPTPSTPTPS 309
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 189 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 67
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive
effector-related similar to Endonuclease sen1
(Swiss-Prot:Q92355) [Schizosaccharomyces pombe]; similar
to tRNA-splicing endonuclease positive effector
(Swiss-Prot:Q00416) [Saccharomyces cerevisiae]
Length = 1090
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 349 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP---AMYVAIQAVLSLYASGLPPV 519
L +PE+ P + P P + +FN P A++ A + +SG+
Sbjct: 433 LNPSPEQFPSYEEQTPATPDCFTTSFVDHLHRSFNAPQLAAIHWAAMHTAAGTSSGVKKQ 492
Query: 520 SCWTPATVSSTPCPSTRDTHS 582
W P T+ P P T TH+
Sbjct: 493 EPW-PFTLVQGP-PGTGKTHT 511
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,570,080
Number of Sequences: 28952
Number of extensions: 440223
Number of successful extensions: 1487
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1457
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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