Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0124
(677 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g51520.1 68416.m05642 diacylglycerol acyltransferase family c... 30 1.6
At5g39690.1 68418.m04806 no apical meristem (NAM) protein-relate... 29 2.1
At5g26610.2 68418.m03181 D111/G-patch domain-containing protein ... 29 2.8
At5g26610.1 68418.m03180 D111/G-patch domain-containing protein ... 29 2.8
At3g58760.1 68416.m06549 ankyrin protein kinase, putative simila... 29 3.7
At4g27220.1 68417.m03909 disease resistance protein (NBS-LRR cla... 28 4.9
At2g43850.2 68415.m05452 ankyrin protein kinase, putative (APK1)... 28 6.5
At2g43850.1 68415.m05451 ankyrin protein kinase, putative (APK1)... 28 6.5
At2g31760.1 68415.m03878 zinc finger protein-related contains lo... 28 6.5
At3g18110.1 68416.m02303 pentatricopeptide (PPR) repeat-containi... 27 8.6
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 27 8.6
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 27 8.6
>At3g51520.1 68416.m05642 diacylglycerol acyltransferase family
contains Pfam PF03982: Diacylglycerol acyltransferase
Length = 314
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -2
Query: 364 GCPYY*YACFPKYGAFFWWAPICTCY-SIHRRIRF*P 257
G P CF + + WW P C Y + R IRF P
Sbjct: 209 GSPLVPVFCFGQARVYKWWKPDCDLYLKLSRAIRFTP 245
>At5g39690.1 68418.m04806 no apical meristem (NAM) protein-related
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to NAC domain protein NAC2
(GI:21554255) {Arabidopsis thaliana}
Length = 294
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/79 (22%), Positives = 32/79 (40%)
Frame = +1
Query: 208 LEANGFVEEFINDHIREVKNGFFCEYCNKYISGPTKKRLHILENTHINNKGIRNLERVGN 387
+ G + E +N + +V + ++ G K+ I E ++ +G+ +RVGN
Sbjct: 11 ISMGGIMWEGLNSSLIKVDEALLKQQIREFEKGNDKEWFIITERNKVD-QGLSQTKRVGN 69
Query: 388 NIVAFKNVTIAKAAWHGIV 444
K V WH V
Sbjct: 70 GAKRQKRVDTNGGYWHATV 88
>At5g26610.2 68418.m03181 D111/G-patch domain-containing protein
contains Pfam PF01585: G-patch domain
Length = 301
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/51 (21%), Positives = 25/51 (49%)
Frame = +1
Query: 229 EEFINDHIREVKNGFFCEYCNKYISGPTKKRLHILENTHINNKGIRNLERV 381
E+ I ++E++ F+CE C+K + H+ H + K + ++ +
Sbjct: 147 EQKIQSDVKEIRKVFYCELCSKQYRTVMEFEGHLSSYDHNHKKRFKEMKEM 197
>At5g26610.1 68418.m03180 D111/G-patch domain-containing protein
contains Pfam PF01585: G-patch domain
Length = 301
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/51 (21%), Positives = 25/51 (49%)
Frame = +1
Query: 229 EEFINDHIREVKNGFFCEYCNKYISGPTKKRLHILENTHINNKGIRNLERV 381
E+ I ++E++ F+CE C+K + H+ H + K + ++ +
Sbjct: 147 EQKIQSDVKEIRKVFYCELCSKQYRTVMEFEGHLSSYDHNHKKRFKEMKEM 197
>At3g58760.1 68416.m06549 ankyrin protein kinase, putative similar
to ankyrin-kinase [Medicago truncatula]
gi|18700701|gb|AAL78674
Length = 471
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 262 KNGFFCEYCNKYISGPTKKRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAWHGI 441
KN + K+ + PT +H+L + + I E +N V T KA+W GI
Sbjct: 126 KNHDVIKLLEKHGAKPTIAPMHVLTDKEVPEYEIHPTELDFSNSVKISKGTFNKASWRGI 185
>At4g27220.1 68417.m03909 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 919
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 241 NDHIREVKNGFFCEYCNKYISGPTKKRLHILENTHINNKGIRNL 372
N H++EV NGF + N I + R+ L ++ N +R+L
Sbjct: 503 NSHVKEVPNGFLQAFPNLRILDLSGVRIRTLPDSFSNLHSLRSL 546
>At2g43850.2 68415.m05452 ankyrin protein kinase, putative (APK1)
similar to ankyrin-kinase [Medicago truncatula]
gi|18700701|gb|AAL78674;contains Pfam profile PF00069:
Protein kinase domain; contains Pfam profile PF00023:
Ankyrin repeat
Length = 479
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = -3
Query: 519 KEMLLSRNVNLHISKFNIADQAGMSNDSMPSCFGDSHIFESNYIISHSFQVSDALIIDMR 340
K +LL R L IS F + + +S D +HI SNY I+ +V I D+R
Sbjct: 323 KNILLDRGGQLKISGFGMIRLSKISQDKAKVANHKAHIDLSNYYIAP--EVYKDEIFDLR 380
Query: 339 V 337
V
Sbjct: 381 V 381
>At2g43850.1 68415.m05451 ankyrin protein kinase, putative (APK1)
similar to ankyrin-kinase [Medicago truncatula]
gi|18700701|gb|AAL78674;contains Pfam profile PF00069:
Protein kinase domain; contains Pfam profile PF00023:
Ankyrin repeat
Length = 479
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = -3
Query: 519 KEMLLSRNVNLHISKFNIADQAGMSNDSMPSCFGDSHIFESNYIISHSFQVSDALIIDMR 340
K +LL R L IS F + + +S D +HI SNY I+ +V I D+R
Sbjct: 323 KNILLDRGGQLKISGFGMIRLSKISQDKAKVANHKAHIDLSNYYIAP--EVYKDEIFDLR 380
Query: 339 V 337
V
Sbjct: 381 V 381
>At2g31760.1 68415.m03878 zinc finger protein-related contains low
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 514
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/49 (20%), Positives = 21/49 (42%)
Frame = +1
Query: 121 HSCCLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEEFINDHIREVKN 267
H C +CG + N ++ H K ++ + + ++R V+N
Sbjct: 302 HRFCWICGKSYSDHYACNNYVEDADHDKRTLLQSEIKRYTHYYVRWVEN 350
>At3g18110.1 68416.m02303 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat
Length = 1429
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 571 TMKENSVHCLTCNEVIKTATQIFVSLHFS 657
TM E +HC NE A+Q+F L S
Sbjct: 682 TMYETLLHCCVANEHYAEASQVFSDLRLS 710
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 115 KVHSCCLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEE 234
K H C L CG + P K+ S+ G + + N F+ +
Sbjct: 275 KGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQ 314
>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
domain-containing protein contains Pfam domains PF00226:
DnaJ domain and PF00096: Zinc finger, C2H2 type
Length = 630
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 130 CLVCGNYFPTEKDANRHISKKGHKKNL 210
C+VC F +EK H K HK+ +
Sbjct: 310 CIVCSKKFKSEKQWKNHEQSKKHKEKV 336
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,772,564
Number of Sequences: 28952
Number of extensions: 348363
Number of successful extensions: 1096
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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