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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0117
         (623 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g08310.1 68417.m01372 expressed protein glutamic acid-rich pr...    32   0.36 
At4g19230.2 68417.m02837 cytochrome P450 family protein cytochro...    31   0.47 
At5g17930.1 68418.m02102 MA3 domain-containing protein low simil...    31   0.82 
At3g19900.1 68416.m02520 expressed protein                             29   1.9  
At5g17240.1 68418.m02020 SET domain-containing protein contains ...    29   2.5  
At4g02710.1 68417.m00366 kinase interacting family protein simil...    29   3.3  
At3g20860.1 68416.m02637 protein kinase family protein contains ...    29   3.3  
At5g64710.2 68418.m08135 expressed protein contains Pfam profile...    28   4.4  
At5g64710.1 68418.m08134 expressed protein contains Pfam profile...    28   4.4  
At5g31412.1 68418.m03722 hypothetical protein contains Pfam doma...    28   4.4  
At3g04810.2 68416.m00521 protein kinase, putative similar to LST...    28   4.4  
At3g04810.1 68416.m00520 protein kinase, putative similar to LST...    28   4.4  
At1g66130.1 68414.m07505 oxidoreductase N-terminal domain-contai...    28   4.4  
At5g28290.1 68418.m03434 protein kinase, putative similar to LST...    28   5.8  
At2g26780.1 68415.m03212 expressed protein contains Pfam profile...    27   7.7  
At2g04230.1 68415.m00410 F-box family protein contains F-box dom...    27   7.7  

>At4g08310.1 68417.m01372 expressed protein glutamic acid-rich
           protein precursor - Plasmodium falciparum, PIR2:A54514
          Length = 504

 Score = 31.9 bits (69), Expect = 0.36
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = +1

Query: 73  DEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGK 249
           D  K  +K+H   CL+  + DE   N L+T + K +  P+K+ A   L K     KDGK
Sbjct: 77  DVHKSFVKQHLVQCLAGAENDETSENSLET-EKKDDVTPVKEAA--ELSKEHTTKKDGK 132


>At4g19230.2 68417.m02837 cytochrome P450 family protein cytochrome
           P450, Arabidopsis thaliana; supported by cDNA:
           gi_15293092_gb_AY050980.1_
          Length = 484

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = -2

Query: 409 ERASGLSRGSISHNSRLFGEGCCLCWPGKRQS 314
           ERA+G S G    +SR     C LCWPG R+S
Sbjct: 439 ERATGFSMG----HSRFPKTDCPLCWPGSRRS 466


>At5g17930.1 68418.m02102 MA3 domain-containing protein low
           similarity to SP|Q9P6R9 Cell cycle control protein cwf22
           {Schizosaccharomyces pombe}; contains Pfam profile
           PF02847: MA3 domain
          Length = 707

 Score = 30.7 bits (66), Expect = 0.82
 Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
 Frame = +1

Query: 106 ADCLSETKADE--QLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKV 279
           A+ ++ET   E  +    LK  + +  N   +K   C+++ S+       F+K + L  +
Sbjct: 479 AEDIAETMDAEVVEAQKMLKLAEAQRMNTDSRKAIFCVIMSSEDYID--AFEKLLRL-DL 535

Query: 280 PNAEDKLKVEKLIDACLANKGNSPHQTAWNYVKCYHEKDPKHAL 411
           P  +D+  +  L++ CL  K  +   T      C H+K+ K  L
Sbjct: 536 PGKQDREIMRVLVECCLQEKAFNKFYTVLASKLCEHDKNHKFTL 579


>At3g19900.1 68416.m02520 expressed protein
          Length = 222

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -3

Query: 159 LQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNADDEHDKSLHD 16
           L F H L +    G+T    F ++  ++  EG + DN+DDE  +SL D
Sbjct: 42  LAFSHSLCLKTTYGKTDRRKFSRICSIVDDEG-NLDNSDDEEKESLDD 88


>At5g17240.1 68418.m02020 SET domain-containing protein contains
           Pfam profile PF00856: SET domain
          Length = 491

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 190 LKKYALCMLI-KSQLMTKDGKFKKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAW 366
           LKK  L + + +  LMT +    KD+ L+   N  + L   +++  CL  + +   ++ W
Sbjct: 57  LKKGELVLKVPRKALMTTESIIAKDLKLSDAVNLHNSLSSTQILSVCLLYEMSKEKKSFW 116

Query: 367 NYVKCYH 387
            Y   +H
Sbjct: 117 -YPYLFH 122


>At4g02710.1 68417.m00366 kinase interacting family protein similar
           to kinase interacting protein 1 (GI:13936326) [Petunia
           integrifolia]
          Length = 1111

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -2

Query: 430 DYVFTRKERASGLSRGSISHNSRLFGEGCCL 338
           DYVFT +E A  +S+G+   +  L  EG CL
Sbjct: 781 DYVFTHRESAGEVSKGADLMDEFLKLEGMCL 811


>At3g20860.1 68416.m02637 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069; contains
           serine/threonine protein kinase domain,
           INTERPRO:IPR002290
          Length = 427

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = +1

Query: 43  VCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIK 222
           VC+V +     +  + +KK R    SE K    +V  L   D+   N  L +   C  I 
Sbjct: 87  VCIVTSYCEGGDMTQMIKKSRGVFASEEKLCRWMVQLLLAIDYLHNNRVLHRDLKCSNI- 145

Query: 223 SQLMTKDGKFK-KDVALAKVPNAED 294
              +TK+ + +  D  LAK+   +D
Sbjct: 146 --FLTKENEVRLGDFGLAKLLGKDD 168


>At5g64710.2 68418.m08135 expressed protein contains Pfam profile
           PF04396: Protein of unknown function, DUF537
          Length = 716

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +1

Query: 49  VVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLI--- 219
           VV  + +    K+N K  + +     ++ ++ V  +K  D K + EP+K   L +     
Sbjct: 237 VVSVEKMCQNMKQNDKDVKEESHQLQESSQEFVQVMKLMDVKAKEEPVKANQLAITAVDD 296

Query: 220 KSQLMTKDGKFKK 258
            S    KDG  KK
Sbjct: 297 VSSFEEKDGFLKK 309


>At5g64710.1 68418.m08134 expressed protein contains Pfam profile
           PF04396: Protein of unknown function, DUF537
          Length = 841

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +1

Query: 49  VVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLI--- 219
           VV  + +    K+N K  + +     ++ ++ V  +K  D K + EP+K   L +     
Sbjct: 362 VVSVEKMCQNMKQNDKDVKEESHQLQESSQEFVQVMKLMDVKAKEEPVKANQLAITAVDD 421

Query: 220 KSQLMTKDGKFKK 258
            S    KDG  KK
Sbjct: 422 VSSFEEKDGFLKK 434


>At5g31412.1 68418.m03722 hypothetical protein contains Pfam domain,
           PF04937: Protein of unknown function (DUF 659)
          Length = 433

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +1

Query: 100 HRADCLSETKADEQLVNKLKT-GDFKTENEPLKKYALCMLIKSQLMTKD-GKFKKDVALA 273
           H  D + E  +    + K++T GD+K EN  L +Y  C+L    +  +D G   K + LA
Sbjct: 227 HTVDLMLEAISKLPKMGKMQTFGDYKGENLFLNRYESCVLEWCDVCVEDFGPLMKLLRLA 286

Query: 274 KVPN 285
              N
Sbjct: 287 DGEN 290


>At3g04810.2 68416.m00521 protein kinase, putative similar to
           LSTK-1-like kinase [Lycopersicon esculentum]
           GI:15637110; contains Pfam profile: PF00069 Eukaryotic
           protein kinase domain
          Length = 578

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = +1

Query: 43  VCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIK 222
           VC+++      +  E +KK      +E K  + LV  L   ++   N  L +   C  I 
Sbjct: 77  VCIIIGYCKGGDMAEAIKKTNGVHFTEEKLCKWLVQILLALEYLHANHILHRDVKCSNI- 135

Query: 223 SQLMTKDGKFK-KDVALAKVPNAED 294
              +TKD   +  D  LAKV  ++D
Sbjct: 136 --FLTKDQDIRLGDFGLAKVLTSDD 158


>At3g04810.1 68416.m00520 protein kinase, putative similar to
           LSTK-1-like kinase [Lycopersicon esculentum]
           GI:15637110; contains Pfam profile: PF00069 Eukaryotic
           protein kinase domain
          Length = 606

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = +1

Query: 43  VCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIK 222
           VC+++      +  E +KK      +E K  + LV  L   ++   N  L +   C  I 
Sbjct: 77  VCIIIGYCKGGDMAEAIKKTNGVHFTEEKLCKWLVQILLALEYLHANHILHRDVKCSNI- 135

Query: 223 SQLMTKDGKFK-KDVALAKVPNAED 294
              +TKD   +  D  LAKV  ++D
Sbjct: 136 --FLTKDQDIRLGDFGLAKVLTSDD 158


>At1g66130.1 68414.m07505 oxidoreductase N-terminal
           domain-containing protein similar to AX110P [Daucus
           carota] GI:285739; contains Pfam profile PF01408:
           Oxidoreductase family NAD-binding Rossmann fold
          Length = 364

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 253 KKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAW 366
           KK   L + P A+D  ++EK+++AC  N       T W
Sbjct: 95  KKKHVLVEKPPAQDATELEKIVEACEYNGVQFMDGTIW 132


>At5g28290.1 68418.m03434 protein kinase, putative similar to
           LSTK-1-like kinase [Lycopersicon esculentum]
           GI:15637110; contains Pfam profile: PF00069 Eukaryotic
           protein kinase domain
          Length = 568

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = +1

Query: 43  VCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIK 222
           VC+V+      +  E +KK      SE K  + LV  L   ++   +  L +   C  I 
Sbjct: 77  VCIVIGYCKGGDMAEAIKKANGVEFSEEKLCKWLVQLLMALEYLHASHILHRDVKCSNI- 135

Query: 223 SQLMTKDGKFK-KDVALAKVPNAED 294
              +TKD   +  D  LAK+  ++D
Sbjct: 136 --FLTKDQDIRLGDFGLAKILTSDD 158


>At2g26780.1 68415.m03212 expressed protein contains Pfam profile
           TBP (TATA-binding protein) -interacting protein 120
           (TIP120); contains TIGRFAM profile TIGR01612:
           reticulocyte binding protein
          Length = 1866

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 321 RLPGQQRQQPSPNSLELCEMLPRERPE 401
           R P ++R++ +PN+LE    LP++  E
Sbjct: 114 RAPAKEREEIAPNTLENVSKLPKQHQE 140


>At2g04230.1 68415.m00410 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 448

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 283 NAEDKLKVEKLIDACLANKGNSPHQTAWNYVKCYHE 390
           ++  KL++ KL D  L +   +P +  WN  KC  E
Sbjct: 333 DSSPKLQILKLTDVYLHDNKTNPDERKWNPPKCAPE 368


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,247,209
Number of Sequences: 28952
Number of extensions: 274869
Number of successful extensions: 766
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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