Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0051
(640 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g52550.1 68418.m06525 expressed protein 33 0.21
At1g02220.1 68414.m00159 no apical meristem (NAM) family protein... 31 0.85
At3g05270.1 68416.m00575 expressed protein similar to endosome-a... 30 1.1
At3g52920.2 68416.m05833 expressed protein weak similarity to en... 30 1.5
At3g52920.1 68416.m05832 expressed protein weak similarity to en... 30 1.5
At1g33970.1 68414.m04212 avirulence-responsive protein, putative... 29 2.0
At3g10880.1 68416.m01310 hypothetical protein 29 2.6
At3g29400.1 68416.m03694 exocyst subunit EXO70 family protein si... 29 3.4
At1g12150.1 68414.m01407 expressed protein contains Pfam profile... 28 4.5
At3g22790.1 68416.m02873 kinase interacting family protein simil... 28 6.0
At3g13200.1 68416.m01652 Cwf15 / Cwc15 cell cycle control family... 28 6.0
At5g35794.1 68418.m04297 hypothetical protein contains Pfam prof... 27 7.9
At3g32080.1 68416.m04078 hypothetical protein contains Pfam prof... 27 7.9
At3g29710.1 68416.m03745 hypothetical protein contains Pfam prof... 27 7.9
At1g65650.1 68414.m07448 ubiquitin carboxyl-terminal hydrolase f... 27 7.9
>At5g52550.1 68418.m06525 expressed protein
Length = 360
Score = 32.7 bits (71), Expect = 0.21
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Frame = +2
Query: 299 DDNGDTELDPRIQVELEKLNAATDEINKLELELDESMKTFHLLLNETSRRLQALTR--RL 472
+D+ D + + ELE++ A ++ N+LE + S L + R+L+ R
Sbjct: 72 EDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAAIMAELEKKKLRKLEEQKRLAEE 131
Query: 473 GTCV--DKSRPYYDALGQAVAARSECQKAAVQFQRASELHAAAKETVTLAEQR 625
G + K R A+ A R+E +K Q ++ +L AA +E A ++
Sbjct: 132 GAAIAEKKKRRLEKAIATTAAIRAELEKKK-QMKKEGQLDAAVEEDSAYAAKK 183
>At1g02220.1 68414.m00159 no apical meristem (NAM) family protein
similar to NAC domain protein NAC2 (GI:15148914)
{Phaseolus vulgaris}; similar to NAC domain protein NAC2
(GI:21554255) {Arabidopsis thaliana}; contains Pfam
PF02365 : No apical meristem (NAM) protein
Length = 394
Score = 30.7 bits (66), Expect = 0.85
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Frame = +2
Query: 290 IPADDNGDTELDPR---IQVE--LEKLNAATDEINKLELELDESMKTFHLLLNETSRRLQ 454
+ +DDN L P+ IQ + ++ I++++ +L ES + L++ T Q
Sbjct: 274 VSSDDNDSDLLTPKTNSIQTSSTCDSFGSSNHRIDQIK-DLQESPTSTINLVSLTQEVSQ 332
Query: 455 ALTRRLGTCVDKSRPYYDALGQAVAARSECQKAAVQFQRASELHAAAKETV 607
AL + T K PY DA G + Q+ ++ +RA H ++ V
Sbjct: 333 ALITSIDTAEKKKNPYDDAQGTEIGEHKLGQE-TIKKKRAGFFHRMIQKFV 382
>At3g05270.1 68416.m00575 expressed protein similar to
endosome-associated protein (EEA1) (GI:1016368) [Homo
sapiens]; similar to smooth muscle myosin heavy chain
(GI:4417214) [Homo sapiens; contains Pfam profile
PF05911: Plant protein of unknown function (DUF869)
Length = 615
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 305 NGDTELDPRIQVELEKLNAATDEINKLELELDESMKTFHLLLNETSRRLQALTRRL 472
NG E +Q L+++ E+ KLE E E LLL E+ ++++ L R+L
Sbjct: 377 NGSKEQIEALQSRLKEIEGKLSEMKKLEAENQE----LELLLGESGKQMEDLQRQL 428
>At3g52920.2 68416.m05833 expressed protein weak similarity to
enterophilin-2L [Cavia porcellus] GI:12718845; contains
Pfam profile PF04949: Family of unknown function
(DUF662)
Length = 177
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 344 LEKLNAATDEINKLELELDESMKTFHLLLNETSRRLQALTRRLGTCVDKSR 496
L A DEI K ++E+ E +K + E +RRL ++ L T D R
Sbjct: 36 LSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETRRLASIREELETMADPMR 86
>At3g52920.1 68416.m05832 expressed protein weak similarity to
enterophilin-2L [Cavia porcellus] GI:12718845; contains
Pfam profile PF04949: Family of unknown function
(DUF662)
Length = 180
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 344 LEKLNAATDEINKLELELDESMKTFHLLLNETSRRLQALTRRLGTCVDKSR 496
L A DEI K ++E+ E +K + E +RRL ++ L T D R
Sbjct: 36 LSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETRRLASIREELETMADPMR 86
>At1g33970.1 68414.m04212 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 342
Score = 29.5 bits (63), Expect = 2.0
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Frame = +2
Query: 317 ELDPRIQVELEKLNAATDEINKLELELDESMKTFHLLLNET-SRRLQALTRRLGTCV-DK 490
EL +Q E KL E+ L+ + + F ++ + R+L +T + T + D
Sbjct: 223 ELFHELQEEAIKLRDQKKEVELLQGYSNNEIDEFKKQIDMSYDRQLSRITEMVETKLRDT 282
Query: 491 SRPYYDALGQAVAARSECQKAAVQFQ-RASELHAAAKETVTLAEQ 622
++ LG+ AAR E +K A + Q R+S+ +E + AE+
Sbjct: 283 AKRLEQQLGEEQAARLEAEKRANEVQKRSSDEIKKLRENLERAEK 327
>At3g10880.1 68416.m01310 hypothetical protein
Length = 278
Score = 29.1 bits (62), Expect = 2.6
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +2
Query: 317 ELDPRIQVELE-KLNAATDEINKLELELDESMKTFHLLLNETSRRLQALTRRLGTCVDKS 493
E + R V+LE KL+ + +I KLE ELDE + + E S+ ++ L+ +KS
Sbjct: 124 ETEKRYVVDLESKLSDSVYKIEKLESELDEVKECLGVSEAEVSKLMEMLSECKN---EKS 180
Query: 494 RPYYDALGQAV-AARSECQKAAVQFQRASE 580
+ D + + R+E + +Q ++ E
Sbjct: 181 KLQTDNADDLLDSLRAELRSREIQIEQMEE 210
>At3g29400.1 68416.m03694 exocyst subunit EXO70 family protein
similar to EXO70 protein (GI:2352998) [Mus musculus];
contains Pfam domain PF03081: Exo70 exocyst complex
subunit
Length = 658
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +2
Query: 254 VIGSAMEESSFTIPADDNGDTELDPRIQVELEKLNAATDEINKLELELDESM 409
V+G+ + E S + A+D D + + I E+LN +++I + E+DESM
Sbjct: 36 VLGNLLLELSRVVIAEDTQDRDEEDEIGEIEERLNVVSEKI--MTREVDESM 85
>At1g12150.1 68414.m01407 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 548
Score = 28.3 bits (60), Expect = 4.5
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +2
Query: 350 KLNAATDEINKLELELDESMKTFHLLLN---ETSRRLQALTRRLGTCVDKSRPYYDALGQ 520
+L+AA ++NK+ D +M LN E R LQ + ++ + DA+ Q
Sbjct: 160 ELDAAKQQLNKIRQSFDSAMDFKATALNQAAEAQRALQVNSAKVNELSKEISDMKDAIHQ 219
Query: 521 -AVAARSECQKAAVQFQRASELHAAAKETVTLAEQRFV 631
+AA Q+ A + +L + V AE++ +
Sbjct: 220 LKLAAAQNLQEHANIVKEKDDLRECYRTAVEEAEKKLL 257
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 335 QVELEKLNAATDEINKLELELDESMKTFHLLLNETSRRLQALTRRL 472
Q ELEK + ++ + LE++ S+KT L +++ + +T L
Sbjct: 425 QNELEKFQSLIEDEHSRYLEIEVSLKTLQSLYSQSQEEQKVITSEL 470
>At3g13200.1 68416.m01652 Cwf15 / Cwc15 cell cycle control family
protein contains Pfam profile PF04889: Cwf15/Cwc15 cell
cycle control protein; similar to Cell cycle control
protein cwf15 (Swiss-Prot:P78794) [Schizosaccharomyces
pombe]
Length = 230
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 272 EESSFTIPADDNGDTELDPRIQVELEKLNAATDEINKLELE 394
++S I +DD+ D E D + + E L A D+I K +E
Sbjct: 111 DDSDVDIKSDDDSDDESDDDDEDDTEALMAELDQIKKERVE 151
>At5g35794.1 68418.m04297 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 662
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 323 DPRIQVELEKLNAATDEINKLEL---ELDESMKTFHLLLNETSRRL 451
DP + +EKL++ D++N+ L E++E TF ++E ++
Sbjct: 581 DPTLVDVMEKLHSINDKLNEALLALMEMEEKQATFEAFMDEMKAKM 626
>At3g32080.1 68416.m04078 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 370
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 323 DPRIQVELEKLNAATDEINKLEL---ELDESMKTFHLLLNETSRRL 451
DP + +EKL++ D++N+ L E++E TF ++E ++
Sbjct: 289 DPTLVDVMEKLHSINDKLNEALLALMEMEEKQATFEAFMDEMKSKM 334
>At3g29710.1 68416.m03745 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 669
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 323 DPRIQVELEKLNAATDEINK---LELELDESMKTFHLLLNETSRRL 451
DP + +EKL++ D++N+ + +E++E TF ++E ++
Sbjct: 588 DPTLVDVMEKLHSINDKLNEALLVLMEIEEKQATFEAFMDEMKAKM 633
>At1g65650.1 68414.m07448 ubiquitin carboxyl-terminal hydrolase
family 1 protein similar to 26S proteasome regulatory
complex subunit p37A [Drosophila melanogaster]
GI:6434962; contains Pfam profile PF01088: Ubiquitin
carboxyl-terminal hydrolase, family 1
Length = 330
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +2
Query: 320 LDPRIQVELEKLNAATDEINKLELELDESMKTFHLLLNETSRRLQALTRRLGTCVDKS 493
+ P IQ +E+ + + N L + + + L E R+ + L ++ TCVDKS
Sbjct: 197 VQPVIQERIERYSQSEIRFNLLAV-IKNRKDIYTAELKELQRQREQLLQQANTCVDKS 253
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,445,946
Number of Sequences: 28952
Number of extensions: 233117
Number of successful extensions: 709
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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