Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0122
         (774 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g14630.1 68416.m01852 cytochrome P450, putative similar to GB...    30   1.5  
At3g29020.1 68416.m03626 myb family transcription factor (MYB110...    29   3.4  
At1g28590.1 68414.m03521 lipase, putative similar to lipase [Ara...    29   4.5  

>At3g14630.1 68416.m01852 cytochrome P450, putative similar to
           GB:Q05047 from [Catharanthus roseus]
          Length = 508

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = +3

Query: 468 PTAYGSTYDVQDE-ERIVG--GHNAELNEWPWIV 560
           PT Y S  +V  E E++V   G + EL+ WPWIV
Sbjct: 165 PTFYKSCIEVMCEWEKLVSDKGSSCELDVWPWIV 198


>At3g29020.1 68416.m03626 myb family transcription factor (MYB110)
           contains Pfam profile: PF00249 myb-like DNA-binding
           domain
          Length = 233

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 498 QDEERIVGGHNAELNEWPWIVALFN 572
           ++EER++  H A  N+W  I  LFN
Sbjct: 123 EEEERLLAAHRAFGNKWAMIAKLFN 147


>At1g28590.1 68414.m03521 lipase, putative similar to lipase
           [Arabidopsis thaliana] GI:1145627; contains InterPro
           Entry IPR001087 Lipolytic enzyme, G-D-S-L family
          Length = 403

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 747 SFNFSFDVRCFGVGFECCSHP 685
           S+NF+F  RC  VG E C  P
Sbjct: 319 SYNFNFSRRCGSVGVEYCDDP 339


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,535,214
Number of Sequences: 28952
Number of extensions: 274857
Number of successful extensions: 781
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)