Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0183
(661 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 184 4e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 184 5e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 184 5e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 182 1e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 182 2e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 182 2e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 180 1e-45
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 180 1e-45
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 180 1e-45
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 161 4e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 152 2e-37
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 150 9e-37
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 99 1e-21
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 90 1e-18
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 81 8e-16
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 69 3e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 52 3e-07
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 49 2e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 45 4e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 33 0.13
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.7
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.7
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 28 4.8
At4g10350.1 68417.m01700 no apical meristem (NAM) family protein... 28 6.3
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 6.3
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.4
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 27 8.4
At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit, ... 27 8.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (449), Expect = 4e-47
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFNTPA
Sbjct: 110 APLNPKANREKMTQIMFETFNTPA 133
Score = 83.8 bits (198), Expect = 9e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 5e-47
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFNTPA
Sbjct: 110 APLNPKANREKMTQIMFETFNTPA 133
Score = 83.8 bits (198), Expect = 9e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 5e-47
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFNTPA
Sbjct: 110 APLNPKANREKMTQIMFETFNTPA 133
Score = 83.8 bits (198), Expect = 9e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 1e-46
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFN PA
Sbjct: 110 APLNPKANREKMTQIMFETFNVPA 133
Score = 83.8 bits (198), Expect = 9e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 80/84 (95%), Positives = 82/84 (97%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFN PA
Sbjct: 110 APLNPKANREKMTQIMFETFNAPA 133
Score = 83.8 bits (198), Expect = 9e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 80/84 (95%), Positives = 82/84 (97%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFN PA
Sbjct: 110 APLNPKANREKMTQIMFETFNAPA 133
Score = 83.8 bits (198), Expect = 9e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 180 bits (437), Expect = 1e-45
Identities = 78/83 (93%), Positives = 83/83 (100%)
Frame = +3
Query: 258 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 437
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 438 PLNPKANREKMTQIMFETFNTPA 506
PLNPKANREKMTQIMFETFN+PA
Sbjct: 111 PLNPKANREKMTQIMFETFNSPA 133
Score = 82.6 bits (195), Expect = 2e-16
Identities = 34/48 (70%), Positives = 43/48 (89%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM+++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 180 bits (437), Expect = 1e-45
Identities = 78/83 (93%), Positives = 83/83 (100%)
Frame = +3
Query: 258 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 437
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 438 PLNPKANREKMTQIMFETFNTPA 506
PLNPKANREKMTQIMFETFN+PA
Sbjct: 111 PLNPKANREKMTQIMFETFNSPA 133
Score = 82.6 bits (195), Expect = 2e-16
Identities = 34/48 (70%), Positives = 43/48 (89%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM+++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 180 bits (437), Expect = 1e-45
Identities = 78/83 (93%), Positives = 83/83 (100%)
Frame = +3
Query: 258 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 437
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 438 PLNPKANREKMTQIMFETFNTPA 506
PLNPKANREKMTQIMFETFN+PA
Sbjct: 111 PLNPKANREKMTQIMFETFNSPA 133
Score = 82.6 bits (195), Expect = 2e-16
Identities = 34/48 (70%), Positives = 43/48 (89%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM+++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 161 bits (391), Expect = 4e-40
Identities = 69/89 (77%), Positives = 82/89 (92%), Gaps = 1/89 (1%)
Frame = +3
Query: 258 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 437
+KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEA
Sbjct: 52 EKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEA 111
Query: 438 PLNPKANREKMTQIMFETFNTPAC-VGXQ 521
PLNPK NREKMTQIMFE+F P+ +G Q
Sbjct: 112 PLNPKVNREKMTQIMFESFAFPSMYIGIQ 140
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGMD +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEK 53
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 152 bits (369), Expect = 2e-37
Identities = 66/89 (74%), Positives = 80/89 (89%), Gaps = 1/89 (1%)
Frame = +3
Query: 258 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 437
+ D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEA
Sbjct: 6 ENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEA 65
Query: 438 PLNPKANREKMTQIMFETFNTPAC-VGXQ 521
PLNPKA+REKMTQIMFETF P+ +G Q
Sbjct: 66 PLNPKADREKMTQIMFETFAVPSMYIGMQ 94
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 150 bits (363), Expect = 9e-37
Identities = 68/89 (76%), Positives = 75/89 (84%)
Frame = +3
Query: 240 RDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 419
RDG +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDG-LNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 420 VLLTEAPLNPKANREKMTQIMFETFNTPA 506
VLLTEAP NPKANREKMTQIMFE+F+ PA
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPA 122
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 136 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 231
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 99 bits (238), Expect = 1e-21
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = +3
Query: 261 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 440
KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 441 LNPKANREKMTQIMFETFN 497
LNP NREKM + MFE +N
Sbjct: 111 LNPSKNREKMIETMFEKYN 129
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 136 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 228
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 89.8 bits (213), Expect = 1e-18
Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Frame = +3
Query: 264 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 435 APLNPKANREKMTQIMFETFNTP 503
+PL P +RE +I+FETFN P
Sbjct: 127 SPLTPPESREYTGEILFETFNVP 149
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 133 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 219
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +3
Query: 270 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 446
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 447 PKANREKMTQIMFETFNTPA 506
+ REK ++MFE + PA
Sbjct: 136 TQQQREKAAELMFEKYKVPA 155
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 222
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 68.9 bits (161), Expect = 3e-12
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +3
Query: 243 DGRYGQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 419
D G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 420 VLLTEAPLNPKANREK 467
+LL E PLN + REK
Sbjct: 121 MLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 222
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 321 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 497
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 133 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 225
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +3
Query: 312 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 491
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 492 F 494
F
Sbjct: 121 F 121
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 136 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 228
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 321 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 497
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 498 TPA 506
PA
Sbjct: 145 VPA 147
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 136 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 237
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -3
Query: 371 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIRVL-LSIPTITP*WRGLPTIEGNT 201
P L V+ ++ D + + + + YI + + P I P RGL +G T
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKP-TRGLIVYQGAT 307
Query: 200 ARGASSPAKPALHIPEPLSTTNAATSS 120
+ +SSPA+P + +P +ST + TS+
Sbjct: 308 S--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 279 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 458
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 459 REK 467
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 279 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 458
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 459 REK 467
REK
Sbjct: 225 REK 227
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 210 LDRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLK 317
L+RG+ S R GR +S D+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSGSRDKAQSRRSKISLK 461
>At4g10350.1 68417.m01700 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
nap gene, Arabidopsis thaliana, gb:AJ222713
Length = 341
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 285 PHLLHKSPSVHTDHHALMAGPSHDRGEHGARSIISCETGL 166
P + HK PS+ D+ + +A S G + +CE GL
Sbjct: 227 PPIFHKPPSLGFDYSSGLARDSESAASEGLQYQQACEPGL 266
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 367 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 278
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 233 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 111
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 359 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLS 255
HVIPV+ + +F+ QD FA ++Y + +LS
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILS 138
>At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit, Arabidopsis thaliana (Ath-A)
Length = 1088
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 395 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARMRRHXTVLSLTRPVVHRYRLDSG 574
AC GT GSP+ +G + +DD D + + + H +T ++ RL++G
Sbjct: 80 ACPQCGTRYKRIKGSPRVEGDEEDDDIDDLEHEFYGMDPEH-----VTEAALYYMRLNTG 134
Query: 575 TGLPTVPXSXDRTP 616
G V +P
Sbjct: 135 RGTDEVSHLYSASP 148
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,420,553
Number of Sequences: 28952
Number of extensions: 316175
Number of successful extensions: 816
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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