Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0141
(667 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01910.2 68414.m00109 anion-transporting ATPase, putative sim... 75 6e-14
At1g01910.1 68414.m00108 anion-transporting ATPase, putative sim... 75 6e-14
At3g10350.1 68416.m01241 anion-transporting ATPase family protei... 57 9e-09
At5g60730.1 68418.m07620 anion-transporting ATPase family protei... 50 2e-06
At1g72110.1 68414.m08335 expressed protein 31 0.52
At5g24440.1 68418.m02880 RNA-binding protein, putative 31 0.69
At5g23720.2 68418.m02781 dual specificity protein phosphatase fa... 29 3.7
At5g23720.1 68418.m02780 dual specificity protein phosphatase fa... 29 3.7
>At1g01910.2 68414.m00109 anion-transporting ATPase, putative
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase
Length = 353
Score = 74.5 bits (175), Expect = 6e-14
Identities = 37/84 (44%), Positives = 56/84 (66%)
Frame = +2
Query: 257 DAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGAF 436
DAF Q+F+K PT V+GF NLFAME+DP V ++ ++ M G+ ++ A
Sbjct: 63 DAFQQRFTKSPTLVQGFSNLFAMEVDPTVETDDM------AGTDGM---DGLFSDLANAI 113
Query: 437 PGIDEAMSYAEVMKLVKGMNFSAV 508
PGIDEAMS+AE++KLV+ M+++ +
Sbjct: 114 PGIDEAMSFAEMLKLVQTMDYATI 137
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +1
Query: 508 MFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFINQIASLFGLAD-FNSD 666
+FDTAPTGHTLRLL FP +E+GL KLM LKS+ + Q++ +FG+ D F D
Sbjct: 138 VFDTAPTGHTLRLLQFPATLEKGLSKLMSLKSRFGGLMTQMSRMFGMEDEFGED 191
Score = 63.3 bits (147), Expect = 1e-10
Identities = 30/74 (40%), Positives = 45/74 (60%)
Frame = +3
Query: 90 EPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDPAHNILMHST 269
E +++N++DQ+SL+W+F CS LA+ L+ VR SVLIISTDPAHN+
Sbjct: 7 EATVQNILDQESLKWVFVGGKGGVGKTTCSSILAICLASVRSSVLIISTDPAHNLSDAFQ 66
Query: 270 RNFLKYQQRLKGLT 311
+ F K ++G +
Sbjct: 67 QRFTKSPTLVQGFS 80
>At1g01910.1 68414.m00108 anion-transporting ATPase, putative
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase
Length = 353
Score = 74.5 bits (175), Expect = 6e-14
Identities = 37/84 (44%), Positives = 56/84 (66%)
Frame = +2
Query: 257 DAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGAF 436
DAF Q+F+K PT V+GF NLFAME+DP V ++ ++ M G+ ++ A
Sbjct: 63 DAFQQRFTKSPTLVQGFSNLFAMEVDPTVETDDM------AGTDGM---DGLFSDLANAI 113
Query: 437 PGIDEAMSYAEVMKLVKGMNFSAV 508
PGIDEAMS+AE++KLV+ M+++ +
Sbjct: 114 PGIDEAMSFAEMLKLVQTMDYATI 137
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +1
Query: 508 MFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFINQIASLFGLAD-FNSD 666
+FDTAPTGHTLRLL FP +E+GL KLM LKS+ + Q++ +FG+ D F D
Sbjct: 138 VFDTAPTGHTLRLLQFPATLEKGLSKLMSLKSRFGGLMTQMSRMFGMEDEFGED 191
Score = 63.3 bits (147), Expect = 1e-10
Identities = 30/74 (40%), Positives = 45/74 (60%)
Frame = +3
Query: 90 EPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDPAHNILMHST 269
E +++N++DQ+SL+W+F CS LA+ L+ VR SVLIISTDPAHN+
Sbjct: 7 EATVQNILDQESLKWVFVGGKGGVGKTTCSSILAICLASVRSSVLIISTDPAHNLSDAFQ 66
Query: 270 RNFLKYQQRLKGLT 311
+ F K ++G +
Sbjct: 67 QRFTKSPTLVQGFS 80
>At3g10350.1 68416.m01241 anion-transporting ATPase family protein
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase; contains non-consensus GA
donor splice site at intron 5
Length = 411
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +1
Query: 508 MFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFINQIASLFGLADFNSD 666
+FDTAPTGHTLRLLS P ++ +GK+++L+ K+ + I S+FG + D
Sbjct: 235 VFDTAPTGHTLRLLSLPDFLDASIGKILKLRQKITSATSAIKSVFGKEEKGPD 287
Score = 31.9 bits (69), Expect = 0.39
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 174 CSCSLAVQLSKVRESVLIISTDPAHNI 254
C+ SLAV+ + L++STDPAH++
Sbjct: 103 CAASLAVRFANNGHPTLVVSTDPAHSL 129
>At5g60730.1 68418.m07620 anion-transporting ATPase family protein
low similarity to SP|O43681 Arsenical pump-driving
ATPase (EC 3.6.3.16) (Arsenite-translocating ATPase)
(Arsenical resistance ATPase) (Arsenite-transporting
ATPase) (ARSA) (ASNA-I) {Homo sapiens}; contains Pfam
profile PF02374: Anion-transporting ATPase
Length = 391
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +1
Query: 508 MFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFINQIASLFG 645
+FDTAPTGHTLRLLS P + + K+ +LK K+ + +FG
Sbjct: 214 VFDTAPTGHTLRLLSLPDFYDSSISKITKLKKKITAAASAFKLVFG 259
Score = 31.1 bits (67), Expect = 0.69
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 174 CSCSLAVQLSKVRESVLIISTDPAHNI 254
C+ SLAV+ + +++STDPAH++
Sbjct: 85 CAASLAVKFASHGHPTIVVSTDPAHSL 111
>At1g72110.1 68414.m08335 expressed protein
Length = 479
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +2
Query: 284 VPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGIDEAMSY 463
+PTK+ +++ +IDPN+ E P+E+ E + M L M + + F + S+
Sbjct: 77 IPTKINVEEHVIVPDIDPNI---ENPDEFLEDYTSNMALSPMDMSKPLWEFHLLKLKTSH 133
Query: 464 AEVMKLVK 487
AE + + +
Sbjct: 134 AEAVTVAR 141
>At5g24440.1 68418.m02880 RNA-binding protein, putative
Length = 320
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 467 EVMKLVKGMNFSAVCSILHRLDILSDFYHSRKL 565
EV K+ F VC +H L +L DFYH ++
Sbjct: 244 EVTKMELENFFKTVCGEVHHLRLLGDFYHQTRI 276
>At5g23720.2 68418.m02781 dual specificity protein phosphatase
family protein contains Pfam profile: PF00782 dual
specificity phosphatase, catalytic domain; contains TG
acceptor splice site at intron 9
Length = 845
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 215 ICVNHIN*SCPQYPDAFD-QKFSKVPTKVKGFDNLFAMEID 334
+C N I S QYPD F+ Q FS + +++F +D
Sbjct: 652 LCANEIGQSDTQYPDLFEYQNFSITDDEDSNIESIFQEALD 692
>At5g23720.1 68418.m02780 dual specificity protein phosphatase
family protein contains Pfam profile: PF00782 dual
specificity phosphatase, catalytic domain; contains TG
acceptor splice site at intron 9
Length = 929
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 215 ICVNHIN*SCPQYPDAFD-QKFSKVPTKVKGFDNLFAMEID 334
+C N I S QYPD F+ Q FS + +++F +D
Sbjct: 736 LCANEIGQSDTQYPDLFEYQNFSITDDEDSNIESIFQEALD 776
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,754,304
Number of Sequences: 28952
Number of extensions: 232291
Number of successful extensions: 645
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -