Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10b19
(657 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g30740.1 68417.m04356 expressed protein hypothetical protein ... 31 0.89
At4g30710.2 68417.m04353 expressed protein contains Pfam domain,... 31 0.89
At4g30710.1 68417.m04352 expressed protein contains Pfam domain,... 31 0.89
At4g34900.1 68417.m04949 xanthine dehydrogenase, putative simila... 30 1.2
At2g01870.1 68415.m00120 expressed protein 29 2.7
At3g43220.1 68416.m04562 phosphoinositide phosphatase family pro... 29 3.6
At2g24070.1 68415.m02875 expressed protein contains Pfam domain,... 28 4.8
At1g30300.1 68414.m03705 expressed protein similar to putative h... 28 4.8
At5g16960.1 68418.m01987 NADP-dependent oxidoreductase, putative... 28 6.3
At3g17440.1 68416.m02227 novel plant SNARE 13 (NPSN13) identical... 28 6.3
At1g26190.1 68414.m03196 phosphoribulokinase/uridine kinase fami... 28 6.3
At3g20090.1 68416.m02548 cytochrome P450 family protein similar ... 27 8.3
At1g76850.1 68414.m08943 expressed protein 27 8.3
>At4g30740.1 68417.m04356 expressed protein hypothetical protein
T29E15.27 - Arabidopsis thaliana,PID:g3738334
Length = 91
Score = 30.7 bits (66), Expect = 0.89
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 161 INNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKN 298
+++ G + +P+ +++ K + E S R PTPE R+PL+GKN
Sbjct: 24 VSSSSGDRTLRPS-SNIAQKHKAET-TSVSRKPTPERKRSPLKGKN 67
>At4g30710.2 68417.m04353 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 30.7 bits (66), Expect = 0.89
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 161 INNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKN 298
+++ G + +P+ +++ K + E S R PTPE R+PL+GKN
Sbjct: 141 VSSSSGDRTLRPS-SNIAQKHKAET-TSVSRKPTPERKRSPLKGKN 184
>At4g30710.1 68417.m04352 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 30.7 bits (66), Expect = 0.89
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 161 INNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKN 298
+++ G + +P+ +++ K + E S R PTPE R+PL+GKN
Sbjct: 141 VSSSSGDRTLRPS-SNIAQKHKAET-TSVSRKPTPERKRSPLKGKN 184
>At4g34900.1 68417.m04949 xanthine dehydrogenase, putative similar
to xanthine dehydrogenase from Gallus gallus, PIR:XOCHDH
[SP|P47990], from Calliphora vicina [SP|P08793];
contains Pfam profile PF02738 Aldehyde oxidase and
xanthine dehydrogenase, molybdopterin binding domain
Length = 1364
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -1
Query: 441 GDRGSYDCKWFFITADRMGLLCINFSSPFVDSNVFLRSIFFVMLCLAPFFPCKGVRVIS- 265
G+ G C + DR C+ S V + F + V CLAP + +G+ VIS
Sbjct: 44 GEGGCGSCTVMVSSYDRESKTCV--PSYTVHTGNFYCRHYAVNACLAPLYSVEGMHVISI 101
Query: 264 -GVGDR 250
GVG R
Sbjct: 102 EGVGHR 107
>At2g01870.1 68415.m00120 expressed protein
Length = 157
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = -1
Query: 375 INFSSPFVDSNVFLRSIFFVMLCLAPFFPCKGVRVISGVGDRGSELPSSNSV 220
I F P S FL S FV+L L F+ + VI D +P NSV
Sbjct: 84 IMFEEPPEISGSFLTSSAFVLLALTLFYNILFITVIKPSMDGPESVPEENSV 135
>At3g43220.1 68416.m04562 phosphoinositide phosphatase family
protein contains similarity to phosphoinositide
phosphatase SAC1 [Rattus norvegicus]
gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
SacI homology domain; identical to SAC domain protein 3
(SAC3) GI:31415722
Length = 818
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 203 CRLVYLNYFPFYY*YSPIKSFRNNLCNYTTSN 108
C + F F Y Y+ ++S++ N+CNY T +
Sbjct: 154 CMVDLTKDFFFSYSYNVMRSYQKNVCNYETGH 185
>At2g24070.1 68415.m02875 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 609
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 191 KPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKN 298
+P+ +++ K + E S R TPE R+PL+GKN
Sbjct: 160 RPSSSNIAHKQQSET-TSVTRKQTPERKRSPLKGKN 194
>At1g30300.1 68414.m03705 expressed protein similar to putative
hydrolase GI:7270684 from [Arabidopsis thaliana];
similar to PhnP protein (GI:15620485) [Rickettsia
conorii]
Length = 324
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Frame = +2
Query: 293 KNGAKHNITKNIDLRKTFESTNGDEKLIHNNPILSAVIKNH-----------LQSYDPRS 439
++ KH + ID+ KTF +H P + ++I H ++S P S
Sbjct: 76 QSDGKHKYIQ-IDVGKTFREQVLRWFTLHKIPQVDSIILTHEHADAVLGLDDIRSVQPFS 134
Query: 440 PTQDFERTPIIIS 478
PT D + TPI +S
Sbjct: 135 PTNDIDPTPIFVS 147
>At5g16960.1 68418.m01987 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and
P2 [SP|Q39173][gi:886430], Arabidopsis thaliana
Length = 346
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 494 LTNDTENLRLISDSCTSPITSKDKDNSCETYMEAKEFSPDLISP 625
+T+ T +LR++ S T+ + K+ SC+ YM + PD +SP
Sbjct: 26 ITSTTIDLRVLKGSMTALV--KNLYLSCDPYMRNRMRKPDPLSP 67
>At3g17440.1 68416.m02227 novel plant SNARE 13 (NPSN13) identical to
Novel plant SNARE 13 (AtNPSN13) (SP:Q9LRP1) {Arabidopsis
thaliana}; contains Pfam profile: PF00190 11S plant seed
storage protein
Length = 269
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +2
Query: 209 LVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNIDLRKTFESTNGDEKL 373
LV + + EL + + R+ +PE+ + K + + LRKT+ ST G++K+
Sbjct: 58 LVKEFDRELKDEEARN-SPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKV 111
>At1g26190.1 68414.m03196 phosphoribulokinase/uridine kinase family
protein weak similarity to SP|Q59190 Uridine kinase (EC
2.7.1.48) (Uridine monophosphokinase) (Cytidine
monophosphokinase) {Borrelia burgdorferi}; contains Pfam
profile PF00485: Phosphoribulokinase / Uridine kinase
family
Length = 674
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +2
Query: 143 SSLLDYINNKMGSNSSKPTDTSLVLKTELELGNS 244
+S ++ +N+K+ N + PT SL ++TE+ G++
Sbjct: 520 TSRIEELNSKLSCNKNSPTQQSLSIQTEVCNGSA 553
>At3g20090.1 68416.m02548 cytochrome P450 family protein similar to
Cytochrome P450 93A3 (P450 CP5) (SP:O81973) {Glycine
max}; contains Pfam profile: PF00067 cytochrome P450
Length = 386
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = +2
Query: 332 LRKTFESTNGDEKLIH-----NNPILSAVIKNHLQSYDP 433
LRK +S G +LIH N P L AV+K L+ + P
Sbjct: 201 LRKEIDSVVGKSRLIHETDIPNLPYLQAVVKEGLRLHPP 239
>At1g76850.1 68414.m08943 expressed protein
Length = 1090
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 503 DTENLRLISDSCTSPITSKDKDNSCETYMEAKEFSPDLISPKNFV*RV 646
D + LRLI++S SP ++ DN T E + D PK F+ R+
Sbjct: 197 DNKTLRLITESSGSPSKAEKVDN---TLREKLVYFSDHFDPKLFLSRI 241
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,677,653
Number of Sequences: 28952
Number of extensions: 249866
Number of successful extensions: 678
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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