Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b15
         (430 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t...    30   0.77 
At5g03370.1 68418.m00290 acylphosphatase family contains Pfam PF...    29   1.3  
At4g24260.1 68417.m03481 endo-1,4-beta-glucanase, putative / cel...    28   2.3  
At4g37030.1 68417.m05245 hypothetical protein                          27   7.1  
At3g14580.1 68416.m01846 pentatricopeptide (PPR) repeat-containi...    27   7.1  
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof...    27   7.1  
At5g54710.1 68418.m06813 ankyrin repeat family protein contains ...    26   9.4  
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit...    26   9.4  

>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
           enhancer of zeste-like protein 1(EZA1) (GI:4185507)
           [Arabidopsis thaliana]; similar to polycomb group
           [Arabidopsis thaliana] GI:1903019 (curly leaf); contains
           Pfam profile PF00856: SET domain
          Length = 856

 Score = 29.9 bits (64), Expect = 0.77
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 174 CWTSSSKMERTRTLSKKFKHCVDGCYCDKGLVRSYSKGPCIEAGK 308
           C T+ +  E+    SK  K+   GC+C K   RS  + PC  AG+
Sbjct: 623 CLTNETCCEKYCGCSKSCKNRFRGCHCAKSQCRS-RQCPCFAAGR 666


>At5g03370.1 68418.m00290 acylphosphatase family contains Pfam
           PF00708: Acylphosphatase
          Length = 171

 Score = 29.1 bits (62), Expect = 1.3
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 361 FL*IGKLSRIFSIFLSLHFPASIQGPLL 278
           FL  GKLS+I S  L +H P + Q PL+
Sbjct: 11  FLSFGKLSQISSSLLRIHNPRNHQNPLI 38


>At4g24260.1 68417.m03481 endo-1,4-beta-glucanase, putative /
           cellulase, putative similar to
           endo-1,4-beta-D-glucanase; cellulase GI:5689613 from
           [Brassica napus]
          Length = 620

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +3

Query: 42  KMKVLWGIVLF-SSFASKLIEGTALINKCGTNEVYKPCQFYEEYTCWTSSSKMERTRTLS 218
           K  + WG   F  +F S       ++ + G+    +  + + ++ CW     +   RT+S
Sbjct: 202 KELIKWGTDYFLKTFNSSADNIYVMVEQVGSGVSGRGSELHNDHYCWMRPEDIHYKRTVS 261

Query: 219 KKFKHCVD 242
           + +  C D
Sbjct: 262 QCYSSCSD 269


>At4g37030.1 68417.m05245 hypothetical protein
          Length = 519

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 159 YEEYTCWTSSSKMERTRTLSKKFKHC-VDGCY 251
           Y  +T W S+ +  R  T S KF HC VDG +
Sbjct: 106 YGFFTPWISAFEAFRQDTESNKFFHCLVDGTW 137


>At3g14580.1 68416.m01846 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 405

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 244 PSTQCLNFFDNVLVLSILLDEVQHVYSS 161
           PS++  NF  N+LV + L DE+  ++ S
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVS 192


>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
           PF05701: Plant protein of unknown function (DUF827)
          Length = 752

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +3

Query: 294 IEAGKCRDKKIEKILDNLPIYKKR 365
           IE  K  D+++EKI +++P YKK+
Sbjct: 185 IERRKTVDQELEKIQEDMPDYKKQ 208


>At5g54710.1 68418.m06813 ankyrin repeat family protein contains
           ankyrin repeat domains, Pfam:PF00023
          Length = 598

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 103 PSINLDANEENKTIPHKTFILQRN 32
           PS+ LD +EE  T+ HK  + QRN
Sbjct: 58  PSLVLDVDEEQSTLLHKA-VTQRN 80


>At4g11160.1 68417.m01808 translation initiation factor IF-2,
           mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
           Translation initiation factor IF-2, mitochondrial
           precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
          Length = 743

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 237 VDGCYCDKGLVRSYSKGPCIEAGKCRDKKIEK 332
           +DG  C  GL+R    G  +  G C   K EK
Sbjct: 660 MDGRVCRSGLMRLLRSGEVVFEGSCASLKREK 691


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,889,812
Number of Sequences: 28952
Number of extensions: 170802
Number of successful extensions: 427
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 675111616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)