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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a22
         (394 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g26000.2 68418.m03094 glycosyl hydrolase family 1 protein con...    31   0.21 
At5g26000.1 68418.m03093 glycosyl hydrolase family 1 protein con...    31   0.21 
At1g23720.1 68414.m02994 proline-rich extensin-like family prote...    29   1.5  
At5g44780.1 68418.m05488 expressed protein low similarity to SP|...    28   2.0  
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica...    28   2.0  
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica...    28   2.0  
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL...    28   2.0  
At1g72110.1 68414.m08335 expressed protein                             28   2.0  
At5g13960.1 68418.m01632 SET domain-containing protein (SUVH4) i...    28   2.6  
At1g07310.1 68414.m00778 C2 domain-containing protein contains s...    28   2.6  
At3g13570.1 68416.m01707 SC35-like splicing factor, 30a kD (SCL3...    27   3.4  
At2g33520.1 68415.m04109 expressed protein                             27   3.4  
At1g31750.1 68414.m03895 proline-rich family protein contains pr...    27   3.4  
At2g37780.1 68415.m04639 DC1 domain-containing protein contains ...    27   4.5  
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex...    27   4.5  
At1g09070.1 68414.m01012 C2 domain-containing protein / src2-lik...    27   4.5  
At5g55540.1 68418.m06919 expressed protein                             27   6.0  
At4g34440.1 68417.m04894 protein kinase family protein contains ...    26   7.9  
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co...    26   7.9  
At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ...    26   7.9  
At1g64960.1 68414.m07363 expressed protein                             26   7.9  
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati...    26   7.9  

>At5g26000.2 68418.m03094 glycosyl hydrolase family 1 protein
           contains Pfam PF00232 : Glycosyl hydrolase family 1
           domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
           identical to Myrosinase precursor (Sinigrinase)
           (SP:P37702) [Arabidopsis thaliana]
          Length = 456

 Score = 31.5 bits (68), Expect = 0.21
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
 Frame = +2

Query: 47  MKFFMIFVLALLAMANAQGNGYEPIDNRPYIVNPPKDYNPNGN---GY-EPIDNGAYYVD 214
           MK  M+  + LLA+A  +G+ +   +N P+  N  K +N +GN   G+   + + AY V+
Sbjct: 1   MKLLMLAFVFLLALATCKGDEFVCEENEPFTCNQTKLFN-SGNFEKGFIFGVASSAYQVE 59

Query: 215 PPQGR 229
             +GR
Sbjct: 60  GGRGR 64


>At5g26000.1 68418.m03093 glycosyl hydrolase family 1 protein
           contains Pfam PF00232 : Glycosyl hydrolase family 1
           domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
           identical to Myrosinase precursor (Sinigrinase)
           (SP:P37702) [Arabidopsis thaliana]
          Length = 541

 Score = 31.5 bits (68), Expect = 0.21
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
 Frame = +2

Query: 47  MKFFMIFVLALLAMANAQGNGYEPIDNRPYIVNPPKDYNPNGN---GY-EPIDNGAYYVD 214
           MK  M+  + LLA+A  +G+ +   +N P+  N  K +N +GN   G+   + + AY V+
Sbjct: 1   MKLLMLAFVFLLALATCKGDEFVCEENEPFTCNQTKLFN-SGNFEKGFIFGVASSAYQVE 59

Query: 215 PPQGR 229
             +GR
Sbjct: 60  GGRGR 64


>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
           contains proline-rich extensin domains,
           INTERPRO:IPR002965
          Length = 895

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +2

Query: 131 PYIVN--PPKDYNPNGNG-YEPIDNGAYYVDPPQGRPYFKPTPFP 256
           PY+ N  PP  Y+P+    Y+       Y  PP   PY+ PTP P
Sbjct: 612 PYVYNSPPPPYYSPSPKPTYKSPPPPYVYSSPPP--PYYSPTPKP 654


>At5g44780.1 68418.m05488 expressed protein low similarity to
           SP|Q38732 DAG protein, chloroplast precursor
           {Antirrhinum majus}
          Length = 723

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 155 DYNP-NGNGYEPIDNGAYYVDPPQGR 229
           +Y+P NG  Y P   G +Y  PPQG+
Sbjct: 530 NYSPQNGGHYGPAQFGQWYPGPPQGQ 555


>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
           protein contains similarity to ec31p [Oryza sativa]
           gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
           WD domain, G-beta repeat
          Length = 1102

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 17/57 (29%), Positives = 21/57 (36%)
 Frame = +2

Query: 83  AMANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPF 253
           A  N Q     P +  P    P    NP  N Y+     +YYV      P  +PT F
Sbjct: 790 ASGNTQPQSTMPYNQEPTQAQPNVLANPYDNQYQQPYTDSYYVPQVSHPPMQQPTMF 846


>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
           protein contains similarity to ec31p [Oryza sativa]
           gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
           WD domain, G-beta repeat
          Length = 1104

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 17/57 (29%), Positives = 21/57 (36%)
 Frame = +2

Query: 83  AMANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPF 253
           A  N Q     P +  P    P    NP  N Y+     +YYV      P  +PT F
Sbjct: 792 ASGNTQPQSTMPYNQEPTQAQPNVLANPYDNQYQQPYTDSYYVPQVSHPPMQQPTMF 848


>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
           (PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
           (EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
           {Arabidopsis thaliana}; contains Pfam profiles: PF00614
           phospholipase D.active site motif, PF00168 C2 domain
          Length = 1083

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 155 DYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 256
           DY P+   Y+P  N   Y  PP    Y +P  +P
Sbjct: 101 DYQPSPYPYQPQGNFGAYGPPPPHYSYQEPAQYP 134


>At1g72110.1 68414.m08335 expressed protein
          Length = 479

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 344 NSYEILKYIVNTLFRY*-FSKIFFTSHREHQGK 249
           N+  I++ I NTL  +  FS I  T H EH+GK
Sbjct: 41  NASTIVEGIKNTLINHPRFSSILVTGHGEHKGK 73


>At5g13960.1 68418.m01632 SET domain-containing protein (SUVH4)
           identical to SUVH4 [Arabidopsis thaliana] GI:13517749;
           contains Pfam profiles PF00856: SET domain, PF05033:
           Pre-SET motif, PF02182: YDG/SRA domain; identical to
           cDNA SUVH4 (SUVH4) GI:13517748
          Length = 624

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = -1

Query: 118 RFVAVSLSVGHSQQSEDENHEEF 50
           R VAV ++ G SQ SEDEN  EF
Sbjct: 514 RDVAVPMNNGVSQSSEDENAPEF 536


>At1g07310.1 68414.m00778 C2 domain-containing protein contains
           similarity to shock protein SRC2 [Glycine max]
           gi|2055230|dbj|BAA19769 ; contains Pfam profile
           PF00168:C2 domain
          Length = 352

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 146 PPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 256
           PP  + P     +P+D    Y   PQG  Y+ P+P P
Sbjct: 141 PPPQHPPPRPQSQPLD----YYSAPQGNHYYSPSPPP 173


>At3g13570.1 68416.m01707 SC35-like splicing factor, 30a kD (SCL30a)
           almost identical to SC35-like splicing factor SCL30a
           GI:9843661 from [Arabidopsis thaliana]; contains Pfam
           profile PF00076: RNA recognition motif. (a.k.a. RRM,
           RBD, or RNP domain)
          Length = 262

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +1

Query: 88  GQRSRKRLRTY*QPPVHR*SSQRLQP*WKRLRTYRQRCILRGP 216
           G+RSR R R Y  PP  R  S+ + P  +  R  ++R   R P
Sbjct: 154 GRRSRSRSRGYNSPPAKRHQSRSVSP--QDRRYEKERSYSRSP 194


>At2g33520.1 68415.m04109 expressed protein 
          Length = 97

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 16/46 (34%), Positives = 19/46 (41%)
 Frame = +2

Query: 98  QGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPY 235
           Q  G  P+  +P I  PP  Y P    Y+    G     PP  RPY
Sbjct: 12  QSPGPSPL-YQPIIEAPPPPYPPTRTRYQDYYGGYGQPHPPPLRPY 56


>At1g31750.1 68414.m03895 proline-rich family protein contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 176

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +2

Query: 146 PPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPGARG 268
           PP+ Y P  +GY P    A Y  PP   P   P  +PG  G
Sbjct: 44  PPQGYPPPPHGYPP----AAYPPPPGAYP---PAGYPGPSG 77


>At2g37780.1 68415.m04639 DC1 domain-containing protein contains
           Pfam PF03107: DC1 domain
          Length = 286

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
 Frame = +2

Query: 149 PKDYNPNGNGYEPIDNGAYYVDPPQGRPYFK----PTPFPGARGG 271
           P+ Y P G GY+P  N  YY     G P  +    P  +P   GG
Sbjct: 154 PEPYPPQGGGYQP-QNQNYYPYMNSGSPKTESIGHPETYPPQGGG 197


>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 826

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = +2

Query: 143 NPPKDYN---PNGNGYEPIDNGAYYVDPPQGRP--YFKPTPFPGARG 268
           +PP +Y    P G    P ++  Y    P   P  Y++ TP P  RG
Sbjct: 766 SPPPEYQSPPPKGCNDSPSNDHHYQTPTPPSLPPPYYEDTPLPPIRG 812


>At1g09070.1 68414.m01012 C2 domain-containing protein / src2-like
           protein, putative similar to cold-regulated gene SRC2
           [Glycine max] GI:2055230; contains Pfam profile PF00168:
           C2 domain; identical to cDNA  src2-like protein
           GI:3426059
          Length = 324

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = +2

Query: 146 PPKDYNPNGN--GYEPIDNGAYYVDPPQGRPYFKP 244
           PP  Y   G   GY P   G Y   PPQG PY  P
Sbjct: 217 PPGAYPQQGGYPGYPPQQQGGYPGYPPQG-PYGYP 250


>At5g55540.1 68418.m06919 expressed protein
          Length = 1380

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +2

Query: 110  YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG 226
            Y  + N    +  P D NP  + + P+ N    VDP  G
Sbjct: 1086 YHDLHNLAQELQVPTDENPEADNHVPVTNELEKVDPSFG 1124


>At4g34440.1 68417.m04894 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 670

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +2

Query: 140 VNPPKDYNPNGNGYEPIDNGAYYVDPPQ 223
           VN    YN N  G  P  NG YY   PQ
Sbjct: 222 VNHMHYYNNNPYGGAPSGNGGYYKGTPQ 249


>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
           contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
           PF04815: Sec23/Sec24 helical domain and PF04810:
           Sec23/Sec24 zinc finger
          Length = 1096

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +2

Query: 107 GYEPIDNRP-YIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTP 250
           G  P+ + P + + PP ++     G  P+  G  Y  PPQ  P    TP
Sbjct: 263 GNSPLSSPPAHSIPPPTNFPGVPYGRPPMPGGFPYGAPPQQLPSAPGTP 311


>At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein
           contains Pfam profile: PF00096 zinc finger, C2H2 type
          Length = 214

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +2

Query: 110 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPGAR 265
           +EP  + P I NP    NPN +          +++P       K TPFP AR
Sbjct: 86  FEPHHHTP-IANP----NPNFSSSSSSSTTTAHLEPSLTNQRSKTTPFPSAR 132


>At1g64960.1 68414.m07363 expressed protein
          Length = 1168

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +3

Query: 99  KETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSL 257
           K   ++L T++   L      TL  +  +L T ++     P +DL+SSLPL+L
Sbjct: 3   KRLRSSLKTSSEEFLSSAVKLTLKSSKPSLKTIINAV--KPSSDLSSSLPLAL 53


>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
           identical to peroxiredoxin (Rehydrin homolog)
           [Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
           profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
           and thiol-specific antioxidant) family
          Length = 216

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 125 NRPYIVNPPKDYNPNGNGYEPIDNG 199
           N P I +P K+  P  N  +PI+NG
Sbjct: 95  NYPIIADPNKEIIPQLNMIDPIENG 119


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,454,290
Number of Sequences: 28952
Number of extensions: 196520
Number of successful extensions: 580
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 567552648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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