Silkworm BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0019
         (622 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ...    80   1e-15
At1g06360.1 68414.m00672 fatty acid desaturase family protein si...    79   2e-15
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ...    77   9e-15
At1g06350.1 68414.m00671 fatty acid desaturase family protein si...    75   4e-14
At3g15870.1 68416.m02007 fatty acid desaturase family protein si...    74   7e-14
At1g06100.1 68414.m00639 fatty acid desaturase family protein si...    73   2e-13
At3g15850.1 68416.m02005 fatty acid desaturase family protein si...    72   3e-13
At1g06090.1 68414.m00638 fatty acid desaturase family protein si...    72   3e-13
At1g06120.1 68414.m00641 fatty acid desaturase family protein si...    71   8e-13
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox...    28   5.7  
At5g41180.1 68418.m05005 leucine-rich repeat protein kinase, put...    27   7.6  

>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
           delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
           GI:2970034 from [Arabidopsis thaliana]
          Length = 305

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 33/82 (40%), Positives = 47/82 (57%)
 Frame = +3

Query: 336 AIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKY 515
           A++++ +G  GIT   HR  +H  +KV   LE        +A Q     WV  HR HH++
Sbjct: 67  ALIVYTVGGLGITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHHQF 126

Query: 516 TDTDADPHNATRGFFFSHIGWL 581
           TD+D DPH+   GF+FSH+ WL
Sbjct: 127 TDSDRDPHSPNEGFWFSHLLWL 148


>At1g06360.1 68414.m00672 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 299

 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 36/96 (37%), Positives = 51/96 (53%)
 Frame = +3

Query: 333 FAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHK 512
           F  VL+ L +  IT   HR  +H  +K+   LE  L  F   A Q     WV  HR HH+
Sbjct: 60  FGFVLYALTSLSITFSYHRNLAHRSFKLPKWLEYPLAYFAVFALQGDPLDWVSIHRFHHQ 119

Query: 513 YTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGK 620
           +TD+D DPH+   GF+FSH+ W+   ++   K  G+
Sbjct: 120 FTDSDRDPHSPIEGFWFSHVWWICDTRYIKYKCGGR 155


>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
           delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
           [Arabidopsis thaliana]
          Length = 307

 Score = 77.0 bits (181), Expect = 9e-15
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = +3

Query: 324 TSVFAIVLFF-LGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHR 500
           ++++   LF+ +G  GIT   HR  +H  +KV   LE LL     +A Q     WV  HR
Sbjct: 64  SALWVTFLFYTIGGLGITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHR 123

Query: 501 LHHKYTDTDADPHNATRGFFFSHIGWL 581
            HH++TD++ DPH+   GF+FSH+ W+
Sbjct: 124 YHHQFTDSERDPHSPKEGFWFSHLLWI 150


>At1g06350.1 68414.m00671 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 300

 Score = 74.9 bits (176), Expect = 4e-14
 Identities = 43/127 (33%), Positives = 60/127 (47%)
 Frame = +3

Query: 240 VMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSHNGYKVK 419
           +++V+R S + I     L   F + K     F +VLF L    IT   HR  SH  +K+ 
Sbjct: 31  LVDVVRASVVVIVHFLCLLAPF-NFKWEALRFGLVLFALTTLSITFSFHRNLSHRSFKIP 89

Query: 420 LPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHP 599
             LE         A Q     WV  HR HH++TD+D DPH+   G  FSHI W+   ++ 
Sbjct: 90  KWLEYPWAYSAVFALQGDPMDWVSIHRFHHQFTDSDRDPHSPKEGLLFSHILWIFDTQYI 149

Query: 600 MVKIAGK 620
             K  G+
Sbjct: 150 KYKCGGR 156


>At3g15870.1 68416.m02007 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 292

 Score = 74.1 bits (174), Expect = 7e-14
 Identities = 32/79 (40%), Positives = 44/79 (55%)
 Frame = +3

Query: 345 LFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDT 524
           L F+    IT   HR  SH  + +   LE L      +AFQ     WV +HR HHK+ +T
Sbjct: 58  LVFINGICITLSYHRNLSHRSFDLPKWLEYLFAYGGVLAFQGDPIEWVSNHRYHHKHCET 117

Query: 525 DADPHNATRGFFFSHIGWL 581
             DPH+ T+GF+FSH+ W+
Sbjct: 118 QRDPHSPTQGFWFSHMAWI 136


>At1g06100.1 68414.m00639 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 299

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 33/83 (39%), Positives = 45/83 (54%)
 Frame = +3

Query: 333 FAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHK 512
           F I+L  L N  IT   HR  +H  +K+   LE        +A Q     WV  HR HH+
Sbjct: 60  FGIILAILTNLCITFSYHRNLTHRSFKLPKWLEYPFAYSALLALQGDPLDWVSIHRFHHQ 119

Query: 513 YTDTDADPHNATRGFFFSHIGWL 581
           +TD+D DPH+   GF+FSH+ W+
Sbjct: 120 FTDSDRDPHSPIEGFWFSHVLWI 142


>At3g15850.1 68416.m02005 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 371

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 34/87 (39%), Positives = 45/87 (51%)
 Frame = +3

Query: 321 ATSVFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHR 500
           A SV   +    G  GIT   HR  SH  +K+   LE L     + A Q     WV  HR
Sbjct: 127 AVSVAFGLYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPIDWVSTHR 186

Query: 501 LHHKYTDTDADPHNATRGFFFSHIGWL 581
            HH++ D+D DPH+   GF+FSH+ W+
Sbjct: 187 YHHQFCDSDRDPHSPLDGFWFSHMNWM 213


>At1g06090.1 68414.m00638 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase GB:BAA25180
           GI:2970034 (ADS1) from [Arabidopsis thaliana]
          Length = 299

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 32/96 (33%), Positives = 48/96 (50%)
 Frame = +3

Query: 333 FAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHK 512
           F ++L  + +  IT   HR  +H  +K+   LE         A Q     WV  HR HH+
Sbjct: 60  FGVILAIVTSLSITFSYHRNLTHKSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQ 119

Query: 513 YTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGK 620
           +TD+D DPH+   GF+FSH+ W+    +   K  G+
Sbjct: 120 FTDSDRDPHSPIEGFWFSHVFWIFDTSYIREKCGGR 155


>At1g06120.1 68414.m00641 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase GB:BAA25180
           GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
           by cDNA:gi_12083275_gb_AF332434.1_AF332434
          Length = 299

 Score = 70.5 bits (165), Expect = 8e-13
 Identities = 33/96 (34%), Positives = 47/96 (48%)
 Frame = +3

Query: 333 FAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHK 512
           FA ++    N  IT   HR  +H  +K+   LE         A Q     WV  HR HH+
Sbjct: 60  FAAMVGISTNLSITFSYHRNLTHRSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQ 119

Query: 513 YTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGK 620
           +TD+D DPH+   GF+FSH+ W+    +   K  G+
Sbjct: 120 FTDSDRDPHSPIEGFWFSHVFWIFDTSYIREKCGGR 155


>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
           lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
           [Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
           thaliana]
          Length = 926

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 13/47 (27%), Positives = 17/47 (36%)
 Frame = +2

Query: 434 PVDGLQQYCFSEHHFHMGERSQATSQVYGH*CRPS*CYERFFFLTHR 574
           PVD    + +     H+G       Q+  H  R   C E F    HR
Sbjct: 556 PVDATSNWMWQLAKAHVGSNDAGVHQLVNHWLRTHACLEPFILAAHR 602


>At5g41180.1 68418.m05005 leucine-rich repeat protein kinase,
           putative contains leucine rich repeat (LRR) domains,
           Pfam:PF00560; contains protein kinase domain,
           Pfam:PF00069
          Length = 664

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 310 QQNWLHRFLLLCYSSLGTLVLQLELIVCGLIMVTKS 417
           +Q WL  F ++  SS+G L L +    C L  + +S
Sbjct: 273 RQTWLRNFEIVTGSSVGLLFLVVMFSACSLCKIKRS 308


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,362,648
Number of Sequences: 28952
Number of extensions: 260429
Number of successful extensions: 582
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)