Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_C08
(1336 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 34 0.24
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 31 1.7
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 31 2.3
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 30 4.0
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 30 4.0
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 5.2
At5g51300.2 68418.m06360 splicing factor-related contains simila... 29 6.9
At5g51300.1 68418.m06359 splicing factor-related contains simila... 29 6.9
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 29 6.9
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 29 6.9
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 6.9
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 29 6.9
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 6.9
At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 6.9
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 29 6.9
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 29 9.1
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 29 9.1
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 33.9 bits (74), Expect = 0.24
Identities = 21/82 (25%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Frame = +1
Query: 835 TXQXPAXPXXXTRXPSPRXSX-MXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPX 1011
T P P + P+P S + P P P P P + P PP
Sbjct: 498 TYSPPVKPPPIQKPPTPTYSPPIKPPPVKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPP 557
Query: 1012 XHHRXHPQXXPPXSPPXXXXRP 1077
H P PP PP P
Sbjct: 558 IHKPPTPTYSPPIKPPPVHKPP 579
Score = 33.1 bits (72), Expect = 0.42
Identities = 20/77 (25%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Frame = +1
Query: 835 TXQXPAXPXXXTRXPSPRXSXMXXDPXXPFP*XXX--PDXTXXPXXLPXLNPFXXPSXPP 1008
T P P + P+P S P P P P +P + P PP
Sbjct: 111 TYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPSYSPPVKPPPVQMPPTPTYSPPIKPP 170
Query: 1009 XXHHRXHPQXXPPXSPP 1059
H P PP PP
Sbjct: 171 PVHKPPTPTYSPPIKPP 187
Score = 32.3 bits (70), Expect = 0.74
Identities = 26/102 (25%), Positives = 30/102 (29%), Gaps = 2/102 (1%)
Frame = +1
Query: 835 TXQXPAXPXXXTRXPSPRXSXMXXDPXX--PFP*XXXPDXTXXPXXLPXLNPFXXPSXPP 1008
T P P + P+P S P P P P P P + P PP
Sbjct: 162 TYSPPIKPPPVHKPPTPTYSPPIKPPVHKPPTP-IYSPPIKPPPVHKPPTPIYSPPIKPP 220
Query: 1009 XXHHRXHPQXXPPXSPPXXXXRPXHXPXXSLSFXPXXAXYTH 1134
H P PP PP P H P + P H
Sbjct: 221 PVHKPPTPTYSPPVKPP-----PVHKPPTPIYSPPIKPPPVH 257
Score = 32.3 bits (70), Expect = 0.74
Identities = 20/76 (26%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Frame = +1
Query: 835 TXQXPAXPXXXTRXPSPRXSX-MXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPX 1011
T P P + P+P S + P P P P P + P PP
Sbjct: 398 TYSPPIKPPPLQKPPTPTYSPPIKLPPVKPPTPIYSPPVKPPPVHKPPTPIYSPPVKPPP 457
Query: 1012 XHHRXHPQXXPPXSPP 1059
H P PP PP
Sbjct: 458 VHKPPTPTYSPPIKPP 473
Score = 31.9 bits (69), Expect = 0.98
Identities = 21/82 (25%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Frame = +1
Query: 835 TXQXPAXPXXXTRXPSPRXSX-MXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPX 1011
T P P + P+P S + P P P P P + P PP
Sbjct: 314 TYSPPIKPPPVQKPPTPTYSPPIKPPPVKPPTPIYSPPVKPPPVHKPPTPIYSPPVKPPP 373
Query: 1012 XHHRXHPQXXPPXSPPXXXXRP 1077
H P PP PP P
Sbjct: 374 VHKPPTPIYSPPVKPPPIQKPP 395
Score = 31.9 bits (69), Expect = 0.98
Identities = 24/82 (29%), Positives = 28/82 (34%), Gaps = 5/82 (6%)
Frame = +1
Query: 847 PAXPXXXTRXPSPRXSXMXXDPXXPFP*XXXPDXTXXPXX-LPXLNP----FXXPSXPPX 1011
P P + P+P S P P P P T P LP + P + P PP
Sbjct: 385 PVKPPPIQKPPTPTYSP----PIKPPPLQKPPTPTYSPPIKLPPVKPPTPIYSPPVKPPP 440
Query: 1012 XHHRXHPQXXPPXSPPXXXXRP 1077
H P PP PP P
Sbjct: 441 VHKPPTPIYSPPVKPPPVHKPP 462
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/84 (26%), Positives = 25/84 (29%), Gaps = 3/84 (3%)
Frame = +1
Query: 835 TXQXPAXPXXXTRXPSPRXSXMXXDPXX---PFP*XXXPDXTXXPXXLPXLNPFXXPSXP 1005
T P P + P+P S P P P P P P + P P
Sbjct: 531 TYSPPIKPPPVHKPPTPTYSPPIKPPPIHKPPTP-TYSPPIKPPPVHKPPTPTYSPPIKP 589
Query: 1006 PXXHHRXHPQXXPPXSPPXXXXRP 1077
P H P PP PP P
Sbjct: 590 PPVHKPPTPTYSPPIKPPPVHKPP 613
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/84 (26%), Positives = 25/84 (29%), Gaps = 3/84 (3%)
Frame = +1
Query: 835 TXQXPAXPXXXTRXPSPRXSXMXXDPXX---PFP*XXXPDXTXXPXXLPXLNPFXXPSXP 1005
T P P + P+P S P P P P P P + P P
Sbjct: 548 TYSPPIKPPPIHKPPTPTYSPPIKPPPVHKPPTP-TYSPPIKPPPVHKPPTPTYSPPIKP 606
Query: 1006 PXXHHRXHPQXXPPXSPPXXXXRP 1077
P H P PP PP P
Sbjct: 607 PPVHKPPTPTYSPPIKPPPVHKPP 630
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/84 (26%), Positives = 25/84 (29%), Gaps = 3/84 (3%)
Frame = +1
Query: 835 TXQXPAXPXXXTRXPSPRXSXMXXDPXX---PFP*XXXPDXTXXPXXLPXLNPFXXPSXP 1005
T P P + P+P S P P P P P P + P P
Sbjct: 565 TYSPPIKPPPVHKPPTPTYSPPIKPPPVHKPPTP-TYSPPIKPPPVHKPPTPTYSPPIKP 623
Query: 1006 PXXHHRXHPQXXPPXSPPXXXXRP 1077
P H P PP PP P
Sbjct: 624 PPVHKPPTPTYSPPIKPPPVHKPP 647
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/84 (26%), Positives = 25/84 (29%), Gaps = 3/84 (3%)
Frame = +1
Query: 835 TXQXPAXPXXXTRXPSPRXSXMXXDPXX---PFP*XXXPDXTXXPXXLPXLNPFXXPSXP 1005
T P P + P+P S P P P P P P + P P
Sbjct: 582 TYSPPIKPPPVHKPPTPTYSPPIKPPPVHKPPTP-TYSPPIKPPPVHKPPTPTYSPPIKP 640
Query: 1006 PXXHHRXHPQXXPPXSPPXXXXRP 1077
P H P PP PP P
Sbjct: 641 PPVHKPPTPTYSPPIKPPPVQKPP 664
Score = 30.3 bits (65), Expect = 3.0
Identities = 20/83 (24%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = +1
Query: 835 TXQXPAXPXXXTRXPSPRXSXMXXDPXXPFP*XXX--PDXTXXPXXLPXLNPFXXPSXPP 1008
T P P + P+P S P P P P +P + P PP
Sbjct: 650 TYSPPIKPPPVQKPPTPTYSPPVKPPPVQLPPTPTYSPPVKPPPVQVPPTPTYSPPVKPP 709
Query: 1009 XXHHRXHPQXXPPXSPPXXXXRP 1077
P PP PP P
Sbjct: 710 PVQVPPTPTYSPPIKPPPVQVPP 732
Score = 29.9 bits (64), Expect = 4.0
Identities = 21/83 (25%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = +1
Query: 835 TXQXPAXPXXXTRXPSPRXSXMXXDPXXPFP*XXX--PDXTXXPXXLPXLNPFXXPSXPP 1008
T P P + P+P S P P P P LP + P PP
Sbjct: 633 TYSPPIKPPPVHKPPTPTYSPPIKPPPVQKPPTPTYSPPVKPPPVQLPPTPTYSPPVKPP 692
Query: 1009 XXHHRXHPQXXPPXSPPXXXXRP 1077
P PP PP P
Sbjct: 693 PVQVPPTPTYSPPVKPPPVQVPP 715
Score = 29.1 bits (62), Expect = 6.9
Identities = 19/74 (25%), Positives = 20/74 (27%)
Frame = +1
Query: 856 PXXXTRXPSPRXSXMXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPXXHHRXHPQ 1035
P T P P S P P P P P + P PP P
Sbjct: 52 PPSYTTPPPPIYSPPIYPPPIQKPPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPT 111
Query: 1036 XXPPXSPPXXXXRP 1077
PP PP P
Sbjct: 112 YSPPIYPPPIQKPP 125
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/83 (24%), Positives = 23/83 (27%), Gaps = 2/83 (2%)
Frame = +1
Query: 835 TXQXPAXPXXXTRXPSPRXSXMXXDPXXPFP*XXX--PDXTXXPXXLPXLNPFXXPSXPP 1008
T P P + P+P S P P P P P + P PP
Sbjct: 77 TYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPTYSPPIYPP 136
Query: 1009 XXHHRXHPQXXPPXSPPXXXXRP 1077
P PP PP P
Sbjct: 137 PIQKPPTPSYSPPVKPPPVQMPP 159
Score = 28.7 bits (61), Expect = 9.1
Identities = 18/72 (25%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = +1
Query: 847 PAXPXXXTRXPSPRXSX-MXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPXXHHR 1023
P P + P+P S + P P P P P + P PP
Sbjct: 452 PVKPPPVHKPPTPTYSPPIKPPPVKPPTPTYSPPVQPPPVQKPPTPTYSPPVKPPPIQKP 511
Query: 1024 XHPQXXPPXSPP 1059
P PP PP
Sbjct: 512 PTPTYSPPIKPP 523
>At3g19320.1 68416.m02450 leucine-rich repeat family protein contains
leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/71 (29%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Frame = +1
Query: 877 PSPRXSXMXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSX--PPXXHHRXHPQXXPPX 1050
P+P P P P P P LP +P P PP HH P PP
Sbjct: 50 PAPSPEPEDYLPLPPPP--QTPPPPPPPQSLPPPSPSPEPEHYPPPPYHHYITPSPPPPR 107
Query: 1051 SPPXXXXRPXH 1083
P P H
Sbjct: 108 PLPPPPPPPLH 118
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 30.7 bits (66), Expect = 2.3
Identities = 24/84 (28%), Positives = 25/84 (29%), Gaps = 1/84 (1%)
Frame = +1
Query: 856 PXXXTRXPSPRXSXMXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXX-PSXPPXXHHRXHP 1032
P P P+ S P P P P P LP P P PP P
Sbjct: 1056 PLPEDSPPLPQESPPPLPPLPPSP--PPPSPPLPPSSLPPPPPAALFPPLPPPPSQPPPP 1113
Query: 1033 QXXPPXSPPXXXXRPXHXPXXSLS 1104
PP SPP P LS
Sbjct: 1114 PLSPPPSPPPPPPPPSQSLTTQLS 1137
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.9 bits (64), Expect = 4.0
Identities = 22/86 (25%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +1
Query: 883 PRXSXMXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPXXHHRXHPQXXPPXSP-- 1056
P+ S DP P P P + P PP H P PP P
Sbjct: 497 PKESPQPDDPYDQSPVTKRRSPPPAPVNSPPPPVYSPPPPPPPVHSPPPPVHSPPPPPVY 556
Query: 1057 -PXXXXRPXHXPXXSLSFXPXXAXYT 1131
P P H P + F P Y+
Sbjct: 557 SPPPPPPPVHSPPPPV-FSPPPPVYS 581
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 29.9 bits (64), Expect = 4.0
Identities = 19/69 (27%), Positives = 23/69 (33%)
Frame = +1
Query: 883 PRXSXMXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPXXHHRXHPQXXPPXSPPX 1062
P S P P P P P P +P PS PP + P P +PP
Sbjct: 16 PGPSSKPVAPPGPSP-CPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPACPPTPPK 74
Query: 1063 XXXRPXHXP 1089
+P P
Sbjct: 75 PQPKPAPPP 83
>At3g19430.1 68416.m02464 late embryogenesis abundant protein-related
/ LEA protein-related similar to late embryogenesis
abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.5 bits (63), Expect = 5.2
Identities = 21/77 (27%), Positives = 21/77 (27%)
Frame = +1
Query: 847 PAXPXXXTRXPSPRXSXMXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPXXHHRX 1026
P P T PS P P P P T P PS P
Sbjct: 114 PVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVPTDP 173
Query: 1027 HPQXXPPXSPPXXXXRP 1077
P PP SPP P
Sbjct: 174 MPSPPPPVSPPPPTPTP 190
>At5g51300.2 68418.m06360 splicing factor-related contains similarity
to SF1 protein [Drosophila melanogaster] GI:6687400
Length = 804
Score = 29.1 bits (62), Expect = 6.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 967 LPXLNPFXXPSXPPXXHHRXHPQXXPP 1047
+P +P+ P PP +H H Q PP
Sbjct: 609 VPSYSPYALPPPPPGSYHPVHGQHMPP 635
>At5g51300.1 68418.m06359 splicing factor-related contains similarity
to SF1 protein [Drosophila melanogaster] GI:6687400
Length = 804
Score = 29.1 bits (62), Expect = 6.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 967 LPXLNPFXXPSXPPXXHHRXHPQXXPP 1047
+P +P+ P PP +H H Q PP
Sbjct: 609 VPSYSPYALPPPPPGSYHPVHGQHMPP 635
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 29.1 bits (62), Expect = 6.9
Identities = 21/72 (29%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Frame = +1
Query: 877 PSPRXSXMXXDPXXPF-P*XXXPDXTXXPXXLPXLNPFXXPSXPPXXHHRXHPQXXPPXS 1053
P P P PF P P P P +P+ P PP + HP PP
Sbjct: 23 PVPPPPSHISPPPPPFSPPHHPPPPHFSPPHQPPPSPYPHPHPPPPSPY-PHPHQPPP-- 79
Query: 1054 PPXXXXRPXHXP 1089
PP P P
Sbjct: 80 PPHVLPPPPPTP 91
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical to
gi_3883126_gb_AAC77826
Length = 135
Score = 29.1 bits (62), Expect = 6.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 966 SPRAXPLXXTXXAPTXTPPXXSAXXPSAXPTPXLXPP 1076
+P A P T P TPP + P+A P P PP
Sbjct: 27 TPTATPPPATPP-PVATPPPVATPPPAATPAPATPPP 62
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.1 bits (62), Expect = 6.9
Identities = 20/82 (24%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Frame = +1
Query: 871 RXPSPRXSXMXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPXXH-HRXHPQXXPP 1047
+ P+P+ + P P T P P P P H H P PP
Sbjct: 61 KPPTPKPPTVKPHPKPPTVKPHPKPPTVKPHPKPPTVKPPHPKPPTKPHPHPKPPIVKPP 120
Query: 1048 XSPPXXXXRPXHXPXXSLSFXP 1113
PP +P P S P
Sbjct: 121 TKPPPSTPKPPTKPPPSTPKPP 142
Score = 28.7 bits (61), Expect = 9.1
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +1
Query: 910 PXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPXXHHRXHPQXXPPXSP 1056
P P P P T P P P PS P HH+ P PP +P
Sbjct: 125 PSTPKPPTKPPPSTPKP---PTTKP--PPSTPKPPHHKPPPTPCPPPTP 168
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical to
gi|10880495|gb|AAG24277
Length = 176
Score = 29.1 bits (62), Expect = 6.9
Identities = 22/81 (27%), Positives = 26/81 (32%)
Frame = +1
Query: 835 TXQXPAXPXXXTRXPSPRXSXMXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPXX 1014
T Q P P T P+P P P P T P P + P+ PP
Sbjct: 19 TGQAPTSPPTAT--PAPPTPTTPPPAATPPPVSAPPPVTTSP---PPVTTAPPPANPPPP 73
Query: 1015 HHRXHPQXXPPXSPPXXXXRP 1077
P PP +PP P
Sbjct: 74 VSSPPPASPPPATPPPVASPP 94
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical to
gi|10880495|gb|AAG24277
Length = 191
Score = 29.1 bits (62), Expect = 6.9
Identities = 22/81 (27%), Positives = 26/81 (32%)
Frame = +1
Query: 835 TXQXPAXPXXXTRXPSPRXSXMXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPXX 1014
T Q P P T P+P P P P T P P + P+ PP
Sbjct: 19 TGQAPTSPPTAT--PAPPTPTTPPPAATPPPVSAPPPVTTSP---PPVTTAPPPANPPPP 73
Query: 1015 HHRXHPQXXPPXSPPXXXXRP 1077
P PP +PP P
Sbjct: 74 VSSPPPASPPPATPPPVASPP 94
>At1g26150.1 68414.m03192 protein kinase family protein similar to Pto
kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 29.1 bits (62), Expect = 6.9
Identities = 19/69 (27%), Positives = 23/69 (33%)
Frame = +1
Query: 883 PRXSXMXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPXXHHRXHPQXXPPXSPPX 1062
P + + P P P P T P ++P PS PP P P SPP
Sbjct: 63 PPETPLSSPPPEPSP--PSPSLTGPPPTTIPVSPPPEPSPPPPLPTEAPPPANPVSSPPP 120
Query: 1063 XXXRPXHXP 1089
P P
Sbjct: 121 ESSPPPPPP 129
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 744
Score = 29.1 bits (62), Expect = 6.9
Identities = 21/80 (26%), Positives = 26/80 (32%), Gaps = 1/80 (1%)
Frame = +1
Query: 877 PSP-RXSXMXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPXXHHRXHPQXXPPXS 1053
PSP + P P P P P P P S PP + P P
Sbjct: 630 PSPVYYPPVTPSPPPPSPVYYPPVTPSPPPPSPVYYPSETQSPPPPTEYYYSPSQSP--- 686
Query: 1054 PPXXXXRPXHXPXXSLSFXP 1113
PP + H P + S+ P
Sbjct: 687 PPTKACKEGHPPQATPSYEP 706
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains leucine-rich
repeats, Pfam:PF00560; contains proline rich extensin
domains, INTERPRO:IPR002965
Length = 470
Score = 28.7 bits (61), Expect = 9.1
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +1
Query: 910 PXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPXXHHRXHPQXXPPXSPPXXXXRPXHXP 1089
P P P P P P P+ PS PP P PP PP P P
Sbjct: 383 PPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPP-PYVYPPPPPPYVYPPPPSPP 441
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/91 (24%), Positives = 27/91 (29%)
Frame = +1
Query: 841 QXPAXPXXXTRXPSPRXSXMXXDPXXPFP*XXXPDXTXXPXXLPXLNPFXXPSXPPXXHH 1020
Q P+ T+ SP+ + P P P P P P S PP H
Sbjct: 625 QPPSPSTEETKTTSPQSPPVHSPPPPP-PVHSPPPPVFSPPPPMHSPPPPVYSPPPPVHS 683
Query: 1021 RXHPQXXPPXSPPXXXXRPXHXPXXSLSFXP 1113
P P P P H P + P
Sbjct: 684 PPPPPVHSPPPPVHSPPPPVHSPPPPVHSPP 714
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,523,091
Number of Sequences: 28952
Number of extensions: 57245
Number of successful extensions: 503
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 12,070,560
effective HSP length: 83
effective length of database: 9,667,544
effective search space used: 3489983384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -