Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_C02
         (971 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g20630.1 68414.m02581 catalase 1 identical to catalase 1 GI:2...   136   2e-32
At4g35090.1 68417.m04984 catalase 2 identical to catalase 2 SP:P...   133   1e-31
At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to c...   123   2e-28
At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to c...   123   2e-28
At3g14205.1 68416.m01795 phosphoinositide phosphatase family pro...    29   4.7  

>At1g20630.1 68414.m02581 catalase 1 identical to catalase 1
           GI:2511725 from [Arabidopsis thaliana]
          Length = 492

 Score =  136 bits (330), Expect = 2e-32
 Identities = 63/109 (57%), Positives = 82/109 (75%)
 Frame = +1

Query: 253 TVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFES 432
           TVG  GP LL+D + L+++++FDRERIPERVVHA+GA A G+FEVTHDIT+ ++A     
Sbjct: 33  TVGTRGPILLEDYHLLEKLANFDRERIPERVVHARGASAKGFFEVTHDITQLTSADFLRG 92

Query: 433 IGKRTPIAVRFSTVGGESGSADTVRDPRGFAVXFYTDDGVWDXLGXTXP 579
            G +TP+ VRFSTV  E GS +T+RDPRGFAV FYT +G +D +G   P
Sbjct: 93  PGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFP 141


>At4g35090.1 68417.m04984 catalase 2 identical to catalase 2
           SP:P25819, GI:17865693 from [Arabidopsis thaliana]
          Length = 492

 Score =  133 bits (322), Expect = 1e-31
 Identities = 61/109 (55%), Positives = 81/109 (74%)
 Frame = +1

Query: 253 TVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFES 432
           TVG  GP LL+D + ++++++FDRERIPERVVHA+GA A G+FEVTHDI+  + A    +
Sbjct: 33  TVGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISNLTCADFLRA 92

Query: 433 IGKRTPIAVRFSTVGGESGSADTVRDPRGFAVXFYTDDGVWDXLGXTXP 579
            G +TP+ VRFSTV  E GS +T+RDPRGFAV FYT +G +D +G   P
Sbjct: 93  PGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFP 141


>At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to
           catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
           thaliana]; identical to catalase 3 (SEN2) mRNA, partial
           cds GI:3158369
          Length = 427

 Score =  123 bits (297), Expect = 2e-28
 Identities = 56/109 (51%), Positives = 78/109 (71%)
 Frame = +1

Query: 253 TVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFES 432
           T+G+ GP LL+D + ++++++F RERIPERVVHA+G  A G+FEVTHDI+  + A    +
Sbjct: 33  TIGERGPVLLEDYHLIEKVANFTRERIPERVVHARGISAKGFFEVTHDISNLTCADFLRA 92

Query: 433 IGKRTPIAVRFSTVGGESGSADTVRDPRGFAVXFYTDDGVWDXLGXTXP 579
            G +TP+ VRFSTV  E  S +T+RD RGFAV FYT +G +D +G   P
Sbjct: 93  PGVQTPVIVRFSTVVHERASPETMRDIRGFAVKFYTREGNFDLVGNNTP 141


>At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to
           catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
           thaliana]; identical to catalase 3 (SEN2) mRNA, partial
           cds GI:3158369
          Length = 492

 Score =  123 bits (297), Expect = 2e-28
 Identities = 56/109 (51%), Positives = 78/109 (71%)
 Frame = +1

Query: 253 TVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFES 432
           T+G+ GP LL+D + ++++++F RERIPERVVHA+G  A G+FEVTHDI+  + A    +
Sbjct: 33  TIGERGPVLLEDYHLIEKVANFTRERIPERVVHARGISAKGFFEVTHDISNLTCADFLRA 92

Query: 433 IGKRTPIAVRFSTVGGESGSADTVRDPRGFAVXFYTDDGVWDXLGXTXP 579
            G +TP+ VRFSTV  E  S +T+RD RGFAV FYT +G +D +G   P
Sbjct: 93  PGVQTPVIVRFSTVVHERASPETMRDIRGFAVKFYTREGNFDLVGNNTP 141


>At3g14205.1 68416.m01795 phosphoinositide phosphatase family
           protein contains similarity to phosphoinositide
           phosphatase SAC1 [Rattus norvegicus]
           gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
           SacI homology domain;  identical to SAC domain protein 2
           (SAC2) GI:31415720
          Length = 808

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -2

Query: 550 LHHQYRTXQQNLEGHEQYQQIHSLHQ-LLRI*QQSVSFCLWTQIL 419
           +H   R    N+EGH  Y+ +   ++ L R  + +V  C+WT  L
Sbjct: 176 MHTLQRNLSNNVEGHTYYESMFVWNEYLTRRIRNNVKDCMWTVAL 220


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,962,791
Number of Sequences: 28952
Number of extensions: 291097
Number of successful extensions: 720
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2353558416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)