Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B04
(515 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl... 34 0.065
At5g43990.2 68418.m05382 SET domain-containing protein identical... 31 0.46
At5g43990.1 68418.m05383 SET domain-containing protein identical... 31 0.46
At3g54790.1 68416.m06063 armadillo/beta-catenin repeat family pr... 31 0.61
At5g16910.1 68418.m01982 cellulose synthase family protein simil... 29 1.4
At4g28570.1 68417.m04087 alcohol oxidase-related low similarity ... 29 1.4
At5g51180.2 68418.m06346 expressed protein 29 1.9
At5g51180.1 68418.m06345 expressed protein 29 1.9
At2g23200.1 68415.m02771 protein kinase family protein contains ... 28 3.2
At3g57030.1 68416.m06348 strictosidine synthase family protein s... 28 4.3
At5g40480.1 68418.m04909 expressed protein ; expression supporte... 27 5.7
At4g21270.1 68417.m03074 kinesin-like protein A (KATA) 27 5.7
At5g64360.3 68418.m08085 DNAJ heat shock N-terminal domain-conta... 27 7.5
At5g64360.2 68418.m08084 DNAJ heat shock N-terminal domain-conta... 27 7.5
At5g64360.1 68418.m08083 DNAJ heat shock N-terminal domain-conta... 27 7.5
At5g52140.1 68418.m06472 zinc finger protein-related 27 7.5
At2g20810.1 68415.m02448 glycosyl transferase family 8 protein c... 27 7.5
At4g11990.1 68417.m01908 expressed protein hypothetical protein ... 27 9.9
At3g62870.1 68416.m07063 60S ribosomal protein L7A (RPL7aB) 60S ... 27 9.9
At2g47610.1 68415.m05940 60S ribosomal protein L7A (RPL7aA) 27 9.9
>At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly
identical to ubiquitin-protein ligase 1 [Arabidopsis
thaliana] GI:7108521; E3, HECT-domain protein family;
similar to GI:7108521, GB:AAF36454 from [Arabidopsis
thaliana]
Length = 3891
Score = 33.9 bits (74), Expect = 0.065
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +1
Query: 46 ASTAGTCSLKSLATTSNSMMISRSSGATPGCAGKRVLS-LSTLTVP 180
AS+ + +++ LAT S+ +SRS+G+ G + RVL LS+LT P
Sbjct: 3290 ASSLSSSTVRELATLSSKQKMSRSTGSMAGASILRVLQVLSSLTSP 3335
>At5g43990.2 68418.m05382 SET domain-containing protein identical to
SET domain protein SUVR2 [Arabidopsis thaliana]
GI:15290521; contains Pfam profiles PF00856: SET domain,
PF05033: Pre-SET motif; identical to cDNA SET domain
protein SUVR2 GI:15290520
Length = 740
Score = 31.1 bits (67), Expect = 0.46
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 126 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAGLAYDN 305
N V +AG +DGT+ I + +HKL+A +++ ++L ++ +G N
Sbjct: 220 NGHVEEKAGETVSTADGTTNDISPTTVARFSDHKLAA--TIEEPPALELASSASGEVKIN 277
Query: 306 VNGHGAT-LTNTHIP 347
++ AT +N H+P
Sbjct: 278 LSFAPATGGSNPHLP 292
>At5g43990.1 68418.m05383 SET domain-containing protein identical to
SET domain protein SUVR2 [Arabidopsis thaliana]
GI:15290521; contains Pfam profiles PF00856: SET domain,
PF05033: Pre-SET motif; identical to cDNA SET domain
protein SUVR2 GI:15290520
Length = 717
Score = 31.1 bits (67), Expect = 0.46
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 126 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAGLAYDN 305
N V +AG +DGT+ I + +HKL+A +++ ++L ++ +G N
Sbjct: 197 NGHVEEKAGETVSTADGTTNDISPTTVARFSDHKLAA--TIEEPPALELASSASGEVKIN 254
Query: 306 VNGHGAT-LTNTHIP 347
++ AT +N H+P
Sbjct: 255 LSFAPATGGSNPHLP 269
>At3g54790.1 68416.m06063 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 760
Score = 30.7 bits (66), Expect = 0.61
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1
Query: 488 SATNSVEIGNLRNAGHVLSSESLCAEVMVIIVEQVDFASGGQLVTETRDVSVCKSRSVSI 309
++ +S+E GN + S SLC E +E + S GQ T +R SVC S S+
Sbjct: 353 TSRSSLETGNGFEKLKINVSASLCGESQSKDLEIFELLSPGQSYTHSRSESVCSVVS-SV 411
Query: 308 DIV 300
D V
Sbjct: 412 DYV 414
>At5g16910.1 68418.m01982 cellulose synthase family protein similar
to gi:2827143 cellulose synthase catalytic subunit,
Arabidopsis thaliana, gi:9622886 cellulose synthase-7
from Zea mays
Length = 1145
Score = 29.5 bits (63), Expect = 1.4
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = -2
Query: 445 GMFLVAKAFALRSWLSLWNRLTLPAAVSLSPKPGM*VFVRVAPCPLTLSYANPAVAAPNF 266
GM + A+ R W L +L +PA V +SP + +F+R+ L L++ P+
Sbjct: 266 GMGMEAQDLMSRPWRPLTRKLKIPAGV-ISPY-RLLIFIRIVVLALFLTW-RVKHQNPDA 322
Query: 265 IWLVRSTEPRALSLWFSL 212
+WL + LWF+L
Sbjct: 323 VWLWGMSV--VCELWFAL 338
>At4g28570.1 68417.m04087 alcohol oxidase-related low similarity to
long chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 748
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 494 VQSATNSVEIGNLRNAGHVLSSESLCAEVMVIIVEQVDFASG 369
V A +VE+G R+ G + E++ E M +++VD G
Sbjct: 623 VSVAAGAVEVGTYRSDGQKMKCEAITKEAMEEFLDEVDAVGG 664
>At5g51180.2 68418.m06346 expressed protein
Length = 357
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -1
Query: 335 VCKSRSV--SIDIVVCQSSCSGSQLHLVSEING 243
+CK+ SV S+D+ CQ+S S S HLV ++G
Sbjct: 10 LCKAESVDGSLDVWSCQNSDSSSADHLVVMVHG 42
>At5g51180.1 68418.m06345 expressed protein
Length = 357
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -1
Query: 335 VCKSRSV--SIDIVVCQSSCSGSQLHLVSEING 243
+CK+ SV S+D+ CQ+S S S HLV ++G
Sbjct: 10 LCKAESVDGSLDVWSCQNSDSSSADHLVVMVHG 42
>At2g23200.1 68415.m02771 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 834
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +3
Query: 300 DNVNGHGATLTNTHIPGFGDKLTAAGKVNLFHNDNHDLSAKAFATKNMPSIPQVPDFNTV 479
D++ H L + + D LTA V+ NH L K+F+ +N+ + P+V +F +
Sbjct: 105 DSLGLHFVRLHFSVVFSRADLLTARFTVSATSGSNHHL--KSFSPQNLTNTPRVEEFLLM 162
Query: 480 GGGLDY 497
L++
Sbjct: 163 MNSLEF 168
>At3g57030.1 68416.m06348 strictosidine synthase family protein
similar to strictosidine synthase [Rauvolfia
serpentina][SP|P15324]
Length = 374
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -2
Query: 304 LSYANPAVAAPN--FIWLVRSTEPRALSLWFSLPVIGTLTIAPEVP 173
L++AN + + F+ +V +T + L LW S P GT + E+P
Sbjct: 218 LAFANGVALSKDRSFVLVVETTTCKILRLWLSGPNAGTHQVFAELP 263
>At5g40480.1 68418.m04909 expressed protein ; expression supported by
MPSS
Length = 1919
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 306 VNGHGATLTNTHIPGFGDKLTAAGKVNLFHNDNH 407
V+ G TLTN H+P G K + N F H
Sbjct: 1610 VDSPGETLTNVHVPAEGYKFPVKFRENKFAVTEH 1643
>At4g21270.1 68417.m03074 kinesin-like protein A (KATA)
Length = 793
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 365 QLVTETRDVSVCKSRSVSIDIVVCQSSCSGSQLHLVSEING-AKSTELVVF 216
++ ET + +R+ S+D+V S SG Q + ++NG ++L +F
Sbjct: 568 EIYNETIRDLLSTNRTTSMDLVRADSGTSGKQYTITHDVNGHTHVSDLTIF 618
>At5g64360.3 68418.m08085 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 464
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 250 STEPRALSLWFSLPVIGTLTIAPEVPSELIVRAPACRRTLE 128
S +P A S W + P L P+ E ++ CRR +
Sbjct: 187 SADPMATSFWTACPYCFVLFEYPKAYEECTLKCQECRRAFQ 227
>At5g64360.2 68418.m08084 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 464
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 250 STEPRALSLWFSLPVIGTLTIAPEVPSELIVRAPACRRTLE 128
S +P A S W + P L P+ E ++ CRR +
Sbjct: 187 SADPMATSFWTACPYCFVLFEYPKAYEECTLKCQECRRAFQ 227
>At5g64360.1 68418.m08083 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 422
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 250 STEPRALSLWFSLPVIGTLTIAPEVPSELIVRAPACRRTLE 128
S +P A S W + P L P+ E ++ CRR +
Sbjct: 187 SADPMATSFWTACPYCFVLFEYPKAYEECTLKCQECRRAFQ 227
>At5g52140.1 68418.m06472 zinc finger protein-related
Length = 277
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = -1
Query: 383 DFASGGQLVTETRDVSVCKSRSVSIDIVVCQSSCSGSQLH 264
D+A G ++ + ++ S+C +++++I + +C S LH
Sbjct: 29 DYAIGREIQQQYQNKSICNDAAIALEIQKEEEACVHSCLH 68
>At2g20810.1 68415.m02448 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 536
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 308 DIVVCQSSCSGSQLHLVSEINGAKSTELVVFVASYRYLDYS 186
D+VV + S + L +NGA T + F ++YL+YS
Sbjct: 365 DVVVQKDLSSLFSIDLNKNVNGAVETCMETFHRYHKYLNYS 405
>At4g11990.1 68417.m01908 expressed protein hypothetical protein
F7H19.40 - Arabidopsis thaliana, PID:e1310054
Length = 501
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 369 AAGKVNLFHND-NHDLSAKAFATKNMPSIPQVPDFNT 476
AA + NL H DL + T+ +IPQ PDF T
Sbjct: 220 AAQETNLVHKALKKDLDKNSLHTRMKITIPQEPDFAT 256
>At3g62870.1 68416.m07063 60S ribosomal protein L7A (RPL7aB) 60S
RIBOSOMAL PROTEIN L7A - Oryza sativa,
SWISSPROT:RL7A_ORYSA
Length = 256
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -2
Query: 196 LTIAPEV-PSELIVRAPACRRTLELPHC 116
+ IA +V P EL+V PA R +E+P+C
Sbjct: 145 VVIAHDVDPIELVVWLPALCRKMEVPYC 172
>At2g47610.1 68415.m05940 60S ribosomal protein L7A (RPL7aA)
Length = 257
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -2
Query: 196 LTIAPEV-PSELIVRAPACRRTLELPHC 116
+ IA +V P EL+V PA R +E+P+C
Sbjct: 146 VVIAHDVDPIELVVWLPALCRKMEVPYC 173
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,751,928
Number of Sequences: 28952
Number of extensions: 242378
Number of successful extensions: 710
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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