Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40123
(703 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 169 2e-42
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 169 2e-42
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 169 2e-42
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 169 2e-42
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 99 3e-21
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 97 8e-21
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 69 2e-12
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 66 2e-11
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 38 0.006
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 38 0.006
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 36 0.020
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 36 0.020
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 35 0.045
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 35 0.060
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.18
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.18
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 33 0.18
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 33 0.18
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.24
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.24
At3g61740.1 68416.m06923 PHD finger family protein (ATX3) contai... 31 0.56
At5g27540.1 68418.m03297 GTP-binding protein-related low similar... 31 0.98
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 0.98
At4g10800.1 68417.m01760 expressed protein predicted proteins, A... 30 1.7
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.7
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.7
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.7
At3g13020.1 68416.m01622 hAT dimerisation domain-containing prot... 29 2.3
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.3
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.3
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 6.9
At5g46380.1 68418.m05708 hypothetical protein 27 9.1
At4g10890.1 68417.m01772 expressed protein 27 9.1
At2g26610.1 68415.m03193 expressed protein ; expression support... 27 9.1
At1g74210.1 68414.m08595 glycerophosphoryl diester phosphodieste... 27 9.1
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 169 bits (410), Expect = 2e-42
Identities = 82/115 (71%), Positives = 91/115 (79%)
Frame = +1
Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435
ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKD 130
Query: 436 GQTREHALLAFTLGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSSYIKKIGYKP 600
GQTREHALLAFTLGVKQ+I NK + KEVSSY+KK+GY P
Sbjct: 131 GQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 130 bits (313), Expect = 1e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 228 DKLKAERE 251
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 46.8 bits (106), Expect = 1e-05
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +2
Query: 581 RRLATNPAAVAFVPISGWHGDNMLEPSTKMPWFQG 685
+++ NP + FVPISG+ GDNM+E ST + W++G
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 169 bits (410), Expect = 2e-42
Identities = 82/115 (71%), Positives = 91/115 (79%)
Frame = +1
Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435
ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKD 130
Query: 436 GQTREHALLAFTLGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSSYIKKIGYKP 600
GQTREHALLAFTLGVKQ+I NK + KEVSSY+KK+GY P
Sbjct: 131 GQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 130 bits (313), Expect = 1e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 228 DKLKAERE 251
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 46.8 bits (106), Expect = 1e-05
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +2
Query: 581 RRLATNPAAVAFVPISGWHGDNMLEPSTKMPWFQG 685
+++ NP + FVPISG+ GDNM+E ST + W++G
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 169 bits (410), Expect = 2e-42
Identities = 82/115 (71%), Positives = 91/115 (79%)
Frame = +1
Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435
ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKD 130
Query: 436 GQTREHALLAFTLGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSSYIKKIGYKP 600
GQTREHALLAFTLGVKQ+I NK + KEVSSY+KK+GY P
Sbjct: 131 GQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 130 bits (313), Expect = 1e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 228 DKLKAERE 251
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 46.8 bits (106), Expect = 1e-05
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +2
Query: 581 RRLATNPAAVAFVPISGWHGDNMLEPSTKMPWFQG 685
+++ NP + FVPISG+ GDNM+E ST + W++G
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 169 bits (410), Expect = 2e-42
Identities = 82/115 (71%), Positives = 91/115 (79%)
Frame = +1
Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435
ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKD 130
Query: 436 GQTREHALLAFTLGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSSYIKKIGYKP 600
GQTREHALLAFTLGVKQ+I NK + KEVSSY+KK+GY P
Sbjct: 131 GQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 130 bits (313), Expect = 1e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 228 DKLKAERE 251
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 46.8 bits (106), Expect = 1e-05
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +2
Query: 581 RRLATNPAAVAFVPISGWHGDNMLEPSTKMPWFQG 685
+++ NP + FVPISG+ GDNM+E ST + W++G
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 98.7 bits (235), Expect = 3e-21
Identities = 48/112 (42%), Positives = 69/112 (61%)
Frame = +1
Query: 259 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 438
T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + G
Sbjct: 166 TVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGG 225
Query: 439 QTREHALLAFTLGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSSYIKKIGY 594
QTREH LA TLGV +LIV VNK + + ++++ ++K GY
Sbjct: 226 QTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGY 277
Score = 68.1 bits (159), Expect = 5e-12
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +3
Query: 57 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 236
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 237 KAER 248
+ ER
Sbjct: 158 EEER 161
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 97.5 bits (232), Expect = 8e-21
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Frame = +1
Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK- 432
IT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 303 ITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNL 362
Query: 433 NGQTREHALLAFTLGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSSYIKKIGYKPSCCR 612
GQTREHA + GV+Q+IV +NK + + DL K+ V S+++ +K S
Sbjct: 363 KGQTREHARVLRGFGVEQVIVAINKMDIVGYSKERFDL--IKQHVGSFLQSCRFKDSSLT 420
Query: 613 FRAHFWMARRQHVGAFNQNAL 675
+ M + V A + N L
Sbjct: 421 WIPLSAMENQNLVAAPSDNRL 441
Score = 77.4 bits (182), Expect = 9e-15
Identities = 32/63 (50%), Positives = 46/63 (73%)
Frame = +3
Query: 63 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 242
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 243 ERE 251
ERE
Sbjct: 298 ERE 300
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 69.3 bits (162), Expect = 2e-12
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +1
Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435
ITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 128 ITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP------ 181
Query: 436 GQTREHALLAFTLGVKQLIVGVNK 507
QT+EH LLA +GV ++V +NK
Sbjct: 182 -QTKEHILLAKQVGVPDMVVFLNK 204
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 45 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 179
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +1
Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435
ITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 116 ITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP------ 169
Query: 436 GQTREHALLAFTLGVKQLIVGVNK 507
QT+EH LLA +GV L+ +NK
Sbjct: 170 -QTKEHILLARQVGVPSLVCFLNK 192
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 54 KEKTHINIVVIGHVDSGKSTTT 119
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 241 LSVSRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408
+S+ + + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 241 LSVSRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408
+S+ + + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/95 (24%), Positives = 43/95 (45%)
Frame = +1
Query: 289 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 468
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 469 TLGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSS 573
+ +K +I+ NK +N + +K +++
Sbjct: 178 MMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/95 (24%), Positives = 43/95 (45%)
Frame = +1
Query: 289 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 468
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 469 TLGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSS 573
+ +K +I+ NK +N + +K +++
Sbjct: 178 MMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 35.1 bits (77), Expect = 0.045
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +1
Query: 283 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 450
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 451 HALLAFTLGVKQLIVGVNK 507
H + +K +I+ NK
Sbjct: 166 HLAAVEIMQLKHIIILQNK 184
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 34.7 bits (76), Expect = 0.060
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +1
Query: 301 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 480
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 481 KQLIVGVNK 507
K +I+ NK
Sbjct: 174 KDIIIIQNK 182
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 286 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 36 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 155
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408
IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 60 ITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 72 NIVVIGHVDSGKSTTTGHLIYKCGG 146
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +1
Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435
ITI A Y V IID PGH DF + D A+L++ + G I+ +
Sbjct: 119 ITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVD 178
Query: 436 GQTREH 453
Q R +
Sbjct: 179 RQMRRY 184
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 72 NIVVIGHVDSGKSTTTGHLIYKCGGI 149
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +1
Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435
ITI A Y V IID PGH DF + D A+L++ + G I+ +
Sbjct: 119 ITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVD 178
Query: 436 GQTREH 453
Q R +
Sbjct: 179 RQMRRY 184
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 72 NIVVIGHVDSGKSTTTGHLIYKCGGI 149
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 304 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 60 KTHINIVVIGHVDSGKSTTTGHLIYKCG 143
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At3g61740.1 68416.m06923 PHD finger family protein (ATX3) contains
Pfam domains PF00628: PHD-finger and PF00855: PWWP
domain; identical to cDNA trithorax 3 (ATX3) partial cds
GI:15217142
Length = 799
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 517 LNHHTVSPDLRKFKKEVSSYIKKIGYKPSCCRFRAHF 627
LNH + P + FK +S++K G CC+ HF
Sbjct: 581 LNHENMEPAVGLFKIPANSFLKTHGSCVHCCKCATHF 617
>At5g27540.1 68418.m03297 GTP-binding protein-related low similarity
to Mig-2-like GTPase Mtl [Drosophila melanogaster]
GI:7271872; contains Pfam profile PF00036: EF hand
Length = 648
Score = 30.7 bits (66), Expect = 0.98
Identities = 22/95 (23%), Positives = 41/95 (43%)
Frame = +1
Query: 292 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFT 471
++Y +D PG ++ ++ G + LIVAA T F + + + F
Sbjct: 2 ARYAAGAVDCPGSPKSVRIVVVGDKGTGKSSLIVAAATDSFPPNVPPVLPDYKLPIEFFP 61
Query: 472 LGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSSY 576
G+ IV + R P + V+ +L++ V +Y
Sbjct: 62 DGIPVTIVDTSSR-PEDRDIVAEELKRADAVVLTY 95
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 30.7 bits (66), Expect = 0.98
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 283 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408
+E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 72 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 170
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At4g10800.1 68417.m01760 expressed protein predicted proteins,
Arabidopsis thaliana
Length = 283
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -2
Query: 624 MGTKATAAGFVANLLDV*GYFLLEFPQIWAHCMVVQWNPFVYSYDELFDTEG 469
+G K +L+ GY ++ P C++ W PF+ L D EG
Sbjct: 148 LGVKVKLVEVTGKILEAVGYGIVIVPSKSRTCLLKIWLPFIRRLKTLVDAEG 199
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 310 IIDAPGHRDFIKNMITGTSQADCAVLIV 393
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 310 IIDAPGHRDFIKNMITGTSQADCAVLIV 393
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 310 IIDAPGHRDFIKNMITGTSQADCAVLIV 393
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At3g13020.1 68416.m01622 hAT dimerisation domain-containing protein
contains Pfam profile: PF04937 domain of unknown
function (DUF659), weak hit to PF05699: hAT family
dimerisation domain
Length = 605
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 487 LIVGVNKRIPLNHHTVSPDLRKFKKEVSSYIKKI--GYKPSCCRFRAHFWMARRQH 648
+ +GV ++IP +H L++ KEV Y+K I +K + C W+ + H
Sbjct: 152 MALGVGQKIPDSHDLNGRLLQEAMKEVQDYVKNIKDSWKITGCSILLDAWIDPKGH 207
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 292 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 393
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 72 NIVVIGHVDSGKSTTTGHLIYKCG 143
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 304 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 393
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 313 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408
+D PGH F G D A+++VAA G
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG 588
>At5g46380.1 68418.m05708 hypothetical protein
Length = 607
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Frame = -2
Query: 258 DTTHAQPLVCPIPKHI*RILYPFP-----GPPSRTSRW 160
D H +PLV P+P H R YP P GP +R+S +
Sbjct: 483 DAYHLRPLVAPLPLH--RDSYPCPPTLAAGPYTRSSAY 518
>At4g10890.1 68417.m01772 expressed protein
Length = 527
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 171 FEKEAQEMGKGSFKYAWVLDKLKAERESYHNRYCSLEVRN*QVLCY 308
F +E +EM + A LK +R+ YH+ + L + +V+ Y
Sbjct: 234 FSEEEEEMAEKQRWIAMYTKHLKQKRKVYHDGFLDLHIARKKVMLY 279
>At2g26610.1 68415.m03193 expressed protein ; expression supported by
MPSS
Length = 1249
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +1
Query: 373 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKRIP 516
+ A L + G G KNG E L K L V N+RIP
Sbjct: 986 ETATLSKTSSKGPSSTGFEKNGSMSEGQLRLMAFEQKDLWVCANERIP 1033
>At1g74210.1 68414.m08595 glycerophosphoryl diester
phosphodiesterase family protein low similarity to
glycerophosphodiester phosphodiesterase [Borrelia
hermsii] GI:1399038; contains Pfam profile PF03009:
Glycerophosphoryl diester phosphodiesterase family
Length = 392
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 499 VNKRIPLNHHTVSPDLRKFKKEVSSYIKKIGYKPSCCRFRAHFWMARRQHVGAFNQNALV 678
+ + +N H P +KF+ +V +KK GY S + + W+ + + +F +LV
Sbjct: 179 IKNPVLMNQHVKWPGGKKFEDKVVETLKKYGYGGS---YLSKKWLKKPLFIQSFAPTSLV 235
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,993,444
Number of Sequences: 28952
Number of extensions: 342484
Number of successful extensions: 1050
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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