BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV10502 (793 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g01850.1 68417.m00242 S-adenosylmethionine synthetase 2 (SAM2... 32 0.50 At3g17390.1 68416.m02222 S-adenosylmethionine synthetase, putati... 32 0.50 At2g36880.1 68415.m04521 S-adenosylmethionine synthetase, putati... 32 0.50 At5g02320.1 68418.m00155 myb family transcription factor (MYB3R5... 30 1.5 At1g02500.2 68414.m00201 S-adenosylmethionine synthetase 1 (SAM1... 30 2.0 At1g02500.1 68414.m00200 S-adenosylmethionine synthetase 1 (SAM1... 30 2.0 >At4g01850.1 68417.m00242 S-adenosylmethionine synthetase 2 (SAM2) identical to S-adenosylmethionine synthetase 2 (Methionine adenosyltransferase 2, AdoMet synthetase 2) [Arabidopsis thaliana] SWISS-PROT:P17562 Length = 393 Score = 31.9 bits (69), Expect = 0.50 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 2/24 (8%) Frame = +3 Query: 3 QRTSTYGHFGR--AGFPWESPKPL 68 Q+T+ YGHFGR F WE KPL Sbjct: 363 QKTAAYGHFGRDDPDFTWEVVKPL 386 >At3g17390.1 68416.m02222 S-adenosylmethionine synthetase, putative similar to S-adenosylmethionine synthetase 2 (Methionine adenosyltransferase 2, AdoMet synthetase 2) [Catharanthus roseus] SWISS-PROT:Q96552 Length = 393 Score = 31.9 bits (69), Expect = 0.50 Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 2/23 (8%) Frame = +3 Query: 6 RTSTYGHFGR--AGFPWESPKPL 68 +T+ YGHFGR A F WE KPL Sbjct: 364 KTAAYGHFGRDDADFTWEVVKPL 386 >At2g36880.1 68415.m04521 S-adenosylmethionine synthetase, putative similar to S-adenosylmethionine synthetase 3 (Methionine adenosyltransferase 3, AdoMet synthetase 3) [Lycopersicon esculentum] SWISS-PROT:P43282 Length = 390 Score = 31.9 bits (69), Expect = 0.50 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 2/24 (8%) Frame = +3 Query: 3 QRTSTYGHFGR--AGFPWESPKPL 68 Q+T+ YGHFGR F WE KPL Sbjct: 363 QKTAAYGHFGRDDPDFTWEVVKPL 386 >At5g02320.1 68418.m00155 myb family transcription factor (MYB3R5) contains Pfam profile: PF00249 myb-like DNA binding domain; identical to cDNA putative c-myb-like transcription factor MYB3R-5 (MYB3R5) GI:15375300 Length = 548 Score = 30.3 bits (65), Expect = 1.5 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +2 Query: 143 YVCHCSEGAASPVSLFRL*CD 205 Y C CS GAASPVSL C+ Sbjct: 382 YECGCSPGAASPVSLMTTPCN 402 >At1g02500.2 68414.m00201 S-adenosylmethionine synthetase 1 (SAM1) identical to S-adenosylmethionine synthetase 1 (Methionine adenosyltransferase 1, AdoMet synthetase 1) [Arabidopsis thaliana] SWISS-PROT:P23686 Length = 393 Score = 29.9 bits (64), Expect = 2.0 Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 2/23 (8%) Frame = +3 Query: 6 RTSTYGHFGR--AGFPWESPKPL 68 +T+ YGHFGR F WE KPL Sbjct: 364 KTAAYGHFGRDDPDFTWEVVKPL 386 >At1g02500.1 68414.m00200 S-adenosylmethionine synthetase 1 (SAM1) identical to S-adenosylmethionine synthetase 1 (Methionine adenosyltransferase 1, AdoMet synthetase 1) [Arabidopsis thaliana] SWISS-PROT:P23686 Length = 393 Score = 29.9 bits (64), Expect = 2.0 Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 2/23 (8%) Frame = +3 Query: 6 RTSTYGHFGR--AGFPWESPKPL 68 +T+ YGHFGR F WE KPL Sbjct: 364 KTAAYGHFGRDDPDFTWEVVKPL 386 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,950,989 Number of Sequences: 28952 Number of extensions: 305503 Number of successful extensions: 539 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 527 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 539 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1785055200 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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