Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30060
(824 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 135 3e-32
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 134 7e-32
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 106 2e-23
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 106 2e-23
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 106 2e-23
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical pr... 31 1.3
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 31 1.3
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 31 1.3
Z75542-4|CAA99861.1| 424|Caenorhabditis elegans Hypothetical pr... 29 4.0
EF601082-1|ABQ96204.1| 370|Caenorhabditis elegans UNC-55a isofo... 29 4.0
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 28 7.1
Z81137-3|CAB03471.1| 338|Caenorhabditis elegans Hypothetical pr... 28 9.3
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 9.3
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 135 bits (327), Expect = 3e-32
Identities = 64/106 (60%), Positives = 78/106 (73%)
Frame = +2
Query: 260 AVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQG 439
A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+ E TTQG
Sbjct: 68 ADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTTQG 127
Query: 440 LDDLAQRCAQYKKDGCHFAKWRCC*RSAATPPRTKLSRKTPMFLAR 577
LDDL RCAQYKKDG FAKWRC + ++T P ++ LAR
Sbjct: 128 LDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLAR 173
Score = 92.3 bits (219), Expect = 4e-19
Identities = 43/65 (66%), Positives = 53/65 (81%)
Frame = +3
Query: 60 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 239
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 240 QLLFS 254
QLLF+
Sbjct: 61 QLLFT 65
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 134 bits (324), Expect = 7e-32
Identities = 64/125 (51%), Positives = 84/125 (67%)
Frame = +2
Query: 260 AVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQG 439
A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+ E TTQG
Sbjct: 68 ADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTTQG 127
Query: 440 LDDLAQRCAQYKKDGCHFAKWRCC*RSAATPPRTKLSRKTPMFLARLRFHLSEPTHSCRL 619
LDDL RCAQYKKDG FAKWRC + ++T P ++ L + + +
Sbjct: 128 LDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLVPI 187
Query: 620 LKPEV 634
++PE+
Sbjct: 188 VEPEI 192
Score = 92.3 bits (219), Expect = 4e-19
Identities = 43/65 (66%), Positives = 53/65 (81%)
Frame = +3
Query: 60 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 239
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 240 QLLFS 254
QLLF+
Sbjct: 61 QLLFT 65
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 106 bits (255), Expect = 2e-23
Identities = 49/81 (60%), Positives = 60/81 (74%)
Frame = +2
Query: 266 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 445
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGLD
Sbjct: 73 LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGLD 132
Query: 446 DLAQRCAQYKKDGCHFAKWRC 508
LA+R A +KK GC FAKWRC
Sbjct: 133 KLAERAAAFKKGGCGFAKWRC 153
Score = 71.3 bits (167), Expect = 8e-13
Identities = 35/57 (61%), Positives = 43/57 (75%)
Frame = +3
Query: 84 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF+
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFT 69
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 508 LLKIGRNTPSYQAIQENANV-SRPLTLPSVRANAFVPIVEARSL 636
+L IG +TPS+ + ENANV +R ++ +AN VPIVE L
Sbjct: 154 VLNIGTHTPSHLGMLENANVLARYASI--CQANGLVPIVEPEVL 195
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 106 bits (255), Expect = 2e-23
Identities = 49/81 (60%), Positives = 60/81 (74%)
Frame = +2
Query: 266 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 445
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGLD
Sbjct: 73 LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGLD 132
Query: 446 DLAQRCAQYKKDGCHFAKWRC 508
LA+R A +KK GC FAKWRC
Sbjct: 133 KLAERAAAFKKGGCGFAKWRC 153
Score = 71.3 bits (167), Expect = 8e-13
Identities = 35/57 (61%), Positives = 43/57 (75%)
Frame = +3
Query: 84 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF+
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFT 69
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 508 LLKIGRNTPSYQAIQENANV-SRPLTLPSVRANAFVPIVEARSL 636
+L IG +TPS+ + ENANV +R ++ +AN VPIVE L
Sbjct: 154 VLNIGTHTPSHLGMLENANVLARYASI--CQANGLVPIVEPEVL 195
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 106 bits (255), Expect = 2e-23
Identities = 49/81 (60%), Positives = 60/81 (74%)
Frame = +2
Query: 266 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 445
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGLD
Sbjct: 73 LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGLD 132
Query: 446 DLAQRCAQYKKDGCHFAKWRC 508
LA+R A +KK GC FAKWRC
Sbjct: 133 KLAERAAAFKKGGCGFAKWRC 153
Score = 71.3 bits (167), Expect = 8e-13
Identities = 35/57 (61%), Positives = 43/57 (75%)
Frame = +3
Query: 84 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF+
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFT 69
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 508 LLKIGRNTPSYQAIQENANV-SRPLTLPSVRANAFVPIVEARSL 636
+L IG +TPS+ + ENANV +R ++ +AN VPIVE L
Sbjct: 154 VLNIGTHTPSHLGMLENANVLARYASI--CQANGLVPIVEPEVL 195
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = -1
Query: 524 RPIFSSNATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 417
RP + N G RP+ G AG RP+ GWC+R+
Sbjct: 42 RPPGNGNGNGNGGGRPTNGGCDAGWRRFNRPNGGWCVRV 80
>Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical
protein T06D8.2 protein.
Length = 708
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 744 VFTSEGEIP*SPKLVKRPGKFFQKKGL 824
+F E+P PKL + G+FFQKK L
Sbjct: 265 LFPENSELPSKPKLYQPVGEFFQKKSL 291
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +1
Query: 427 HHPGSGRPRPALRPVQEGRLPLRQVALLLKIGRNTPSYQA---IQENANVSRPLTLPSVR 597
+HP PRP + P +L L A L +I + PS + I E N+S+ SVR
Sbjct: 842 NHPNLFEPRPVVAPFVVEKLQLDVPARLFEISQQDPSSSSASQIPEIFNLSKIGYQSSVR 901
Query: 598 -ANAFVPIVEARSLY 639
A + +EA S Y
Sbjct: 902 SAKPLIEELEAMSTY 916
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +1
Query: 427 HHPGSGRPRPALRPVQEGRLPLRQVALLLKIGRNTPSYQA---IQENANVSRPLTLPSVR 597
+HP PRP + P +L L A L +I + PS + I E N+S+ SVR
Sbjct: 842 NHPNLFEPRPVVAPFVVEKLQLDVPARLFEISQQDPSSSSASQIPEIFNLSKIGYQSSVR 901
Query: 598 -ANAFVPIVEARSLY 639
A + +EA S Y
Sbjct: 902 SAKPLIEELEAMSTY 916
>Z75542-4|CAA99861.1| 424|Caenorhabditis elegans Hypothetical
protein F55D12.4 protein.
Length = 424
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +1
Query: 388 QGCR--PAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALL--LKIGRNTPSYQAIQE 555
Q CR +R+G R S + A+ VQ GRLP+ +L R+ + ++
Sbjct: 107 QYCRLTKCIRMGMRKEGRRSNETQTAVSAVQRGRLPVTMPSLFPPNMFLRSPFPFMSVPF 166
Query: 556 NANVSRPLTLPSVRANAF 609
N ++ T PS++ + F
Sbjct: 167 NPLMTAQFTKPSIKESIF 184
>EF601082-1|ABQ96204.1| 370|Caenorhabditis elegans UNC-55a isoform
protein.
Length = 370
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +1
Query: 388 QGCR--PAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALL--LKIGRNTPSYQAIQE 555
Q CR +R+G R S + A+ VQ GRLP+ +L R+ + ++
Sbjct: 74 QYCRLTKCIRMGMRKEGRRSNETQTAVSAVQRGRLPVTMPSLFPPNMFLRSPFPFMSVPF 133
Query: 556 NANVSRPLTLPSVRANAF 609
N ++ T PS++ + F
Sbjct: 134 NPLMTAQFTKPSIKESIF 151
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 326 DGTPLVSLLEKKGII--PGIKVDKGVVPLFGSEDECT 430
D +PLVS+L G+I P + + VPLF ED CT
Sbjct: 10 DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43
>Z81137-3|CAB03471.1| 338|Caenorhabditis elegans Hypothetical
protein W02D9.4 protein.
Length = 338
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Frame = +1
Query: 418 RRMHHPGSGRPRPALRPVQEGRLPLRQVALL----LKIGRNT--PSYQAIQENANVS 570
RR HH G+ + PA R +Q+G R V + LK G+ + P ++ +++N + S
Sbjct: 124 RRTHHHGTIKEYPAYRCIQKGCQTFRSVKKVLETDLKRGKLSILPEFEFLEQNESES 180
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 480 SFLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVPSSA 319
S L +Q +S P VV SSS +S T ST+ P +S + PS++
Sbjct: 450 STLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTS 503
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,437,585
Number of Sequences: 27780
Number of extensions: 484595
Number of successful extensions: 1393
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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