Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30055
(803 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1289 - 36010924-36011001,36011441-36011518,36012321-360124... 54 1e-07
05_05_0110 + 22470869-22470920,22471044-22471146,22473261-224733... 54 2e-07
06_01_0650 - 4701939-4702224,4702513-4702604,4703022-4703049,470... 42 8e-04
03_02_0755 + 10932897-10933010,10933446-10933577,10933666-109337... 36 0.029
01_06_1150 + 34910941-34911010,34911611-34911738,34912025-349121... 36 0.029
01_06_0129 - 26770543-26770720,26774592-26774719,26774829-267749... 34 0.12
06_03_0198 - 17797574-17797717,17797995-17798099,17798509-177986... 34 0.15
02_01_0154 + 1078561-1078630,1078758-1078885,1079016-1079120,107... 34 0.15
04_04_1516 - 34122205-34122348,34122430-34122534,34122878-341230... 33 0.35
03_06_0260 - 32717142-32717270,32717743-32717831,32717950-327180... 33 0.35
09_02_0285 + 6894899-6895114,6896197-6896422,6896889-6896992,689... 32 0.46
07_01_0481 - 3621798-3621926,3622572-3622660,3622780-3622933,362... 32 0.46
06_03_1005 + 26837047-26837093,26837644-26837731,26837854-268379... 32 0.61
02_02_0339 + 9115297-9115366,9116280-9116407,9117537-9117641,911... 31 0.81
10_08_0755 - 20329127-20329189,20329276-20329389,20329465-203296... 31 1.4
03_01_0159 + 1298002-1298070,1298181-1298264,1300354-1300506,130... 31 1.4
05_07_0076 - 27520152-27520379,27520785-27521096,27521194-275213... 30 1.9
03_05_0699 - 26914930-26915052,26915636-26915738,26916044-269161... 30 1.9
07_01_0069 + 505291-505327,505726-505956,506317-506652,507025-50... 29 3.3
02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670 29 4.3
01_01_0939 - 7404209-7404490,7405057-7405368,7405470-7405609,740... 29 5.7
01_01_0928 + 7339796-7339806,7339923-7340043,7340463-7340549,734... 29 5.7
12_02_1249 - 27331801-27331896,27331984-27332072,27334020-273340... 28 7.6
12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626... 28 7.6
01_01_1187 + 9444742-9445317 28 7.6
03_05_0006 + 19527479-19528769,19529693-19530105,19530220-195304... 28 10.0
03_01_0296 + 2284385-2285629,2287632-2288594 28 10.0
>01_06_1289 -
36010924-36011001,36011441-36011518,36012321-36012421,
36012506-36012603,36016213-36016315,36016435-36016486
Length = 169
Score = 54.4 bits (125), Expect = 1e-07
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +2
Query: 344 MSNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLY 505
M+ T+ +S L L + K L + PV+GF L+ + N+FEW+V I GPPDTLY
Sbjct: 1 MAATISQASLL--LQKQLKDLAKHPVDGFSAGLVDDSNVFEWQVTIIGPPDTLY 52
Score = 37.9 bits (84), Expect = 0.009
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 594 HPNVYENGDLCISILHPP 647
HPNVY +G +CISILHPP
Sbjct: 82 HPNVYPDGRVCISILHPP 99
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 511 GYFKAHMKFPPDYPYSPPSIRVFN*SLGIQMYMKTEIFAYRFSTRPWDDPQSGEL 675
GYF A M FP +YP SPP++R + +Y + P DDP EL
Sbjct: 55 GYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRV-CISILHPPGDDPNGYEL 108
>05_05_0110 +
22470869-22470920,22471044-22471146,22473261-22473358,
22473430-22473530,22474052-22474129,22474578-22474655
Length = 169
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +2
Query: 365 SSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLY 505
S A L + K L + PV+GF L+ + N+FEW+V I GPPDTLY
Sbjct: 6 SQASLLLQKQLKDLAKNPVDGFSAGLVDDSNVFEWQVTIIGPPDTLY 52
Score = 37.9 bits (84), Expect = 0.009
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 594 HPNVYENGDLCISILHPP 647
HPNVY +G +CISILHPP
Sbjct: 82 HPNVYPDGRVCISILHPP 99
Score = 35.9 bits (79), Expect = 0.038
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 511 GYFKAHMKFPPDYPYSPPSIR 573
GYF A M FP +YP SPPS+R
Sbjct: 55 GYFNAIMTFPQNYPNSPPSVR 75
>06_01_0650 -
4701939-4702224,4702513-4702604,4703022-4703049,
4703440-4703479,4703611-4703672,4703864-4703927,
4704043-4704081,4705571-4705625,4705730-4705786
Length = 240
Score = 41.5 bits (93), Expect = 8e-04
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 487 TAGYTLSSGYFKAHMKFPPDYPYSPPSI 570
+AG GY+ +KFPPDYP+ PPSI
Sbjct: 44 SAGTPFEGGYYYGKLKFPPDYPFKPPSI 71
>03_02_0755 +
10932897-10933010,10933446-10933577,10933666-10933750,
10934668-10934831,10934911-10935357
Length = 313
Score = 36.3 bits (80), Expect = 0.029
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQ 508
A++ + E K +Q P F L ED +FEW+ AI GP D+ ++
Sbjct: 13 AVKRILQEVKEMQSNPSPDFMAMPLEED-IFEWQFAILGPRDSEFE 57
>01_06_1150 +
34910941-34911010,34911611-34911738,34912025-34912129,
34912525-34912668
Length = 148
Score = 36.3 bits (80), Expect = 0.029
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLY 505
A + + E K LQ++P GED +F W+ I GPPD+ Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPAGED-MFHWQATIMGPPDSPY 45
Score = 32.7 bits (71), Expect = 0.35
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
+ G F ++ FPPDYP+ PP +
Sbjct: 46 AGGVFLVNIHFPPDYPFKPPKV 67
>01_06_0129 -
26770543-26770720,26774592-26774719,26774829-26774933,
26775661-26775788,26777332-26777433,26778760-26778861,
26779777-26779852,26779971-26780059,26780177-26780230,
26780482-26780614,26780671-26780797,26781590-26781648
Length = 426
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
A + + E K LQ++P +GED +F W+ I GP D+ Y T + P
Sbjct: 226 ASKRIQKELKDLQKDPPTSCSAGPVGED-MFHWQATIMGPSDSPYAGGVFLVTIHFPPDY 284
Query: 551 RIHHHPLGFLTKVW 592
+ F TKV+
Sbjct: 285 PFKPPKVAFRTKVF 298
Score = 31.5 bits (68), Expect = 0.81
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
+ G F + FPPDYP+ PP +
Sbjct: 270 AGGVFLVTIHFPPDYPFKPPKV 291
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 525 THEIPP*LPVFTTIH*GF*LKSGHPNVYENGDLCISIL 638
T PP P F F K HPN+ NG +C+ IL
Sbjct: 277 TIHFPPDYP-FKPPKVAFRTKVFHPNINSNGSICLDIL 313
>06_03_0198 -
17797574-17797717,17797995-17798099,17798509-17798636,
17799444-17799513
Length = 148
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLY 505
A + + E K LQ++P +GED +F W+ I GP D+ Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVGED-MFHWQATIMGPADSPY 45
Score = 31.9 bits (69), Expect = 0.61
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
+ G F + FPPDYP+ PP +
Sbjct: 46 AGGVFLVSIHFPPDYPFKPPKV 67
>02_01_0154 +
1078561-1078630,1078758-1078885,1079016-1079120,
1079228-1079371
Length = 148
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
ALR + E K LQ +P + +D +F W+ I GP D+ Y T + P
Sbjct: 2 ALRRIIKELKDLQRDPPTSCSAGPVSDD-MFHWQATIMGPNDSPYSGGVFLVTIHFPPDY 60
Query: 551 RIHHHPLGFLTKVW 592
+ F TKV+
Sbjct: 61 PFKPPKVAFKTKVF 74
Score = 32.7 bits (71), Expect = 0.35
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
S G F + FPPDYP+ PP +
Sbjct: 46 SGGVFLVTIHFPPDYPFKPPKV 67
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 525 THEIPP*LPVFTTIH*GF*LKSGHPNVYENGDLCISIL 638
T PP P F F K HPN+ NG++C+ IL
Sbjct: 53 TIHFPPDYP-FKPPKVAFKTKVFHPNINSNGNICLDIL 89
>04_04_1516 -
34122205-34122348,34122430-34122534,34122878-34123005,
34124003-34124072
Length = 148
Score = 32.7 bits (71), Expect = 0.35
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
+ G F ++ FPPDYP+ PP +
Sbjct: 46 AGGVFLVNIHFPPDYPFKPPKV 67
Score = 32.3 bits (70), Expect = 0.46
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDT 499
A + + E K LQ++P +GED +F W+ I GP D+
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVGED-MFHWQATIMGPSDS 43
>03_06_0260 -
32717142-32717270,32717743-32717831,32717950-32718039,
32721571-32721596,32721772-32721896
Length = 152
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 362 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT 529
++ A + L ++K LQ++P G ++N+ W IFGP DT + T + T
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGIS-GAPHDNNIMLWNAVIFGPDDTPWDGGTFKLT 56
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 507 KWILQGTHEIPP*LPVFTTIH*GF*LKSGHPNVYENGDLCISIL 638
K LQ T + P PV + F HPN+Y +G +C+ IL
Sbjct: 54 KLTLQFTEDYPNKPPVVRFVSRMF-----HPNIYADGSICLDIL 92
>09_02_0285 +
6894899-6895114,6896197-6896422,6896889-6896992,
6897121-6897239,6897445-6897634
Length = 284
Score = 32.3 bits (70), Expect = 0.46
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
+ G F ++ FPPDYP+ PP +
Sbjct: 46 AGGVFFVNIHFPPDYPFKPPKV 67
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLY 505
A + + E L+++P GED LF W+ I GP D+ Y
Sbjct: 2 ASKRIQKELMDLRKDPPTSCSAGPAGED-LFHWQATIMGPSDSPY 45
>07_01_0481 -
3621798-3621926,3622572-3622660,3622780-3622933,
3624104-3624111,3625522-3625547,3625757-3625881
Length = 176
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 475 GNLR---TAGYTLSSGYFKAHMKFPPDYPYSPPSIR 573
GNLR T +S G FK ++F DYP PP++R
Sbjct: 60 GNLRSRLTVNSYVSVGTFKLTLQFTEDYPNKPPTVR 95
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 362 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDT 499
++ A + L ++K LQ++P G ++N+ W IFGP DT
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGIS-GAPHDNNIMLWNAVIFGPDDT 46
>06_03_1005 +
26837047-26837093,26837644-26837731,26837854-26837998,
26838150-26838227,26838323-26838435,26838538-26838641,
26838804-26839119
Length = 296
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 368 SALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQ 508
+ +R LA E KSL E P EG +V ++ +D+ I GP T Y+
Sbjct: 54 NVVRQLAKELKSLDESPPEGIKV-IVNDDDFTTIFADIEGPAGTPYE 99
>02_02_0339 +
9115297-9115366,9116280-9116407,9117537-9117641,
9118165-9118259,9119472-9119538,9119685-9119720
Length = 166
Score = 31.5 bits (68), Expect = 0.81
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
+ G F + FPPDYP+ PP +
Sbjct: 46 AGGVFLVTIHFPPDYPFKPPKV 67
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLY 505
A + + E K LQ++P + ED +F W+ + GP D+ Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATLMGPSDSPY 45
>10_08_0755 -
20329127-20329189,20329276-20329389,20329465-20329617,
20331790-20332035
Length = 191
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 594 HPNVYENGDLCISILHPPVG*SSVWRTA 677
HPNVY +G +C+SIL+ G WR A
Sbjct: 115 HPNVYPSGTVCLSILNEDSG----WRPA 138
>03_01_0159 +
1298002-1298070,1298181-1298264,1300354-1300506,
1300589-1300702,1300814-1300876
Length = 160
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 594 HPNVYENGDLCISILHPPVG*SSVWRTA 677
HPNVY +G +C+SIL+ G WR A
Sbjct: 84 HPNVYPSGTVCLSILNEDSG----WRPA 107
>05_07_0076 -
27520152-27520379,27520785-27521096,27521194-27521333,
27521893-27521956,27522071-27522277,27522350-27522493,
27522578-27522709,27522880-27524294,27524647-27524920,
27526096-27526129,27527028-27527059
Length = 993
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 490 AGYTLSSGYFKAHMKFPPDYPYSPPSI 570
AG F + FPPDYP+ PPS+
Sbjct: 790 AGTPYHDNLFFFDIFFPPDYPHEPPSV 816
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 594 HPNVYENGDLCISILHPPVG-*SSVW 668
+PN+YE+G +C+S+L G S VW
Sbjct: 826 NPNLYESGKVCLSLLKTWAGTGSEVW 851
>03_05_0699 -
26914930-26915052,26915636-26915738,26916044-26916147,
26916298-26916327
Length = 119
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +2
Query: 347 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDT 517
S V + A L E Q P GF+ K+ DNL W + + G TLY +T
Sbjct: 8 SRKVLSKIACNRLQKELAEWQVNPPSGFKHKVT--DNLQRWVIEVAGAAGTLYAGET 62
>07_01_0069 +
505291-505327,505726-505956,506317-506652,507025-507372,
507735-508594,508902-508971,509157-509371,509477-509537,
509606-509715,510644-510694,510794-510916
Length = 813
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 449 EDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTTRIHHHPLGFLTK 586
ED WE F P +TL D+ +P T I HP +L K
Sbjct: 669 EDPDLPWEQEEFSPSNTLLVDDSPYKALGNPPHTAIFPHPYSYLNK 714
>02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670
Length = 197
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 359 PTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLY 505
P +A R ++ E + L +P R +L WEV I GPP T Y
Sbjct: 32 PRKAAQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPY 80
>01_01_0939 -
7404209-7404490,7405057-7405368,7405470-7405609,
7406226-7406289,7406378-7406616,7406957-7406983,
7407590-7407749
Length = 407
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 490 AGYTLSSGYFKAHMKFPPDYPYSPPSI 570
AG G F ++FP +YP SPP +
Sbjct: 186 AGTPYHDGLFFFDVRFPSEYPQSPPKV 212
>01_01_0928 +
7339796-7339806,7339923-7340043,7340463-7340549,
7341230-7341637,7341726-7341789,7342654-7342793,
7342878-7343189,7343733-7344137
Length = 515
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +3
Query: 594 HPNVYENGDLCISILHPPVG*SSVWRTAPANVGNPTQSVRNRYSPSGNLNPSKEPEHLSV 773
+PN+Y NG +C+S+L W + NP+QS + S E + +
Sbjct: 289 NPNLYNNGKVCLSLL-------GTWAGSGCETWNPSQSTMLQVLVSIQALILNEKPYFNE 341
Query: 774 PGERS 788
PG S
Sbjct: 342 PGYAS 346
>12_02_1249 -
27331801-27331896,27331984-27332072,27334020-27334083,
27334208-27334336,27334554-27334607,27334712-27334741
Length = 153
Score = 28.3 bits (60), Expect = 7.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 594 HPNVYENGDLCISILH 641
HP++Y NG +C+ IL+
Sbjct: 81 HPHIYSNGHICLDILY 96
>12_02_0973 + 24959440-24959451,24959962-24962195,24962539-24962653,
24963146-24963943,24964140-24964422,24964500-24964951,
24965744-24965870,24965950-24966074,24966188-24966858,
24966976-24967093,24967177-24967293,24967564-24967658,
24968152-24968303,24968858-24968913,24969001-24969218,
24969842-24970239,24970345-24970628,24970730-24970836,
24970882-24970968,24971729-24971990,24972228-24972503,
24973197-24973254,24973437-24973756,24973889-24973999,
24974183-24974350,24974494-24974622,24974731-24974820,
24974934-24975040,24975133-24975281,24975584-24975666,
24975749-24975844,24975957-24976079,24976180-24976263,
24976371-24976511,24976652-24976951,24977386-24977453,
24977540-24977642,24979363-24979524,24979613-24981230,
24981270-24981661,24981689-24981991,24982078-24982161,
24982296-24982448,24982678-24982841,24982915-24983062,
24983209-24983331,24983409-24983496,24983686-24983867
Length = 4177
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 25 SSDYVSLNGASLSHCCLTDRVLWVYCFVYFS 117
SS V LNG L+H +T R L++ C ++S
Sbjct: 2626 SSSAVELNGVLLNHALVTFRELFLKCAQHYS 2656
>01_01_1187 + 9444742-9445317
Length = 191
Score = 28.3 bits (60), Expect = 7.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 517 FKAHMKFPPDYPYSPPSIR 573
++ + FP +YPY PP +R
Sbjct: 96 YRLSLAFPGEYPYKPPKVR 114
>03_05_0006 +
19527479-19528769,19529693-19530105,19530220-19530430,
19530531-19530768,19530847-19530997,19531240-19531542
Length = 868
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -2
Query: 796 VGIDRSPGTERCSGSFEGLRLPE-GEYRLRTDCVGFPTFAGAVRQTEDHPTGGW 638
+GID G +R S+ P GEY R D G P F T + +G W
Sbjct: 165 LGIDFRTGLDRYMNSWRAADDPSPGEYSFRIDPSGSPEFFLYRWSTRTYGSGPW 218
>03_01_0296 + 2284385-2285629,2287632-2288594
Length = 735
Score = 27.9 bits (59), Expect = 10.0
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 67 CCLTDRVLWVYC 102
CCL DR+LW+ C
Sbjct: 430 CCLLDRILWLVC 441
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,639,862
Number of Sequences: 37544
Number of extensions: 576319
Number of successful extensions: 1442
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1442
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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