Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30055
(803 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 54 8e-08
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 52 4e-07
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 39 0.004
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 38 0.006
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 38 0.010
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 36 0.024
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 36 0.024
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 34 0.096
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 34 0.096
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 34 0.096
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 34 0.13
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 33 0.17
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 33 0.17
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 33 0.29
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 33 0.29
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 33 0.29
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 33 0.29
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 33 0.29
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 33 0.29
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 33 0.29
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 32 0.51
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 32 0.51
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 32 0.51
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 32 0.51
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 31 0.68
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 31 0.68
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 31 0.68
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 31 0.68
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 31 0.68
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 31 0.90
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 31 1.2
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 29 2.7
At1g55535.2 68414.m06355 expressed protein 29 2.7
At1g55535.1 68414.m06354 expressed protein 29 2.7
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 29 4.8
At4g10020.1 68417.m01639 short-chain dehydrogenase/reductase (SD... 24 5.6
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 28 8.3
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 28 8.3
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 28 8.3
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +2
Query: 365 SSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQ 508
S A L + K L + PV+GF L+ E N+FEW V I GPPDTLY+
Sbjct: 3 SQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYE 50
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 594 HPNVYENGDLCISILHPP 647
HPNVY +G +CISILHPP
Sbjct: 79 HPNVYPDGRVCISILHPP 96
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 511 GYFKAHMKFPPDYPYSPPSIRVFN*SLGIQMYMKTEIFAYRFSTRPWDDPQSGEL 675
G+F A M FP +YP SPP++R + +Y + P DDP EL
Sbjct: 52 GFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRV-CISILHPPGDDPSGYEL 105
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +2
Query: 383 LALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQ 508
L + K L ++PV+GF L+ E N+F+W V+I GPPDTLY+
Sbjct: 10 LQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYE 51
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 594 HPNVYENGDLCISILHPP 647
HPNVY +G +CISILHPP
Sbjct: 80 HPNVYSDGKVCISILHPP 97
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 511 GYFKAHMKFPPDYPYSPPSIRVFN*SLGIQMYMKTEIFAYRFSTRPWDDPQSGEL 675
G+F A M FP +YP SPP++ + +Y ++ P DDP EL
Sbjct: 53 GFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKV-CISILHPPGDDPHGYEL 106
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQ 508
A++ + E K +Q P + F + L E+N+FEW+ AI GP DT ++
Sbjct: 12 AVKRILQEVKEMQANPSDDF-MSLPLEENIFEWQFAIRGPGDTEFE 56
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 594 HPNVYENGDLCISILHPP 647
HPNVY +G +CISILHPP
Sbjct: 111 HPNVYSDGRVCISILHPP 128
Score = 37.1 bits (82), Expect = 0.014
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 455 NLFEWEVAIFGPPDTLYQ 508
N+FEW V I GPPDTLY+
Sbjct: 65 NIFEWSVTIIGPPDTLYE 82
Score = 34.7 bits (76), Expect = 0.073
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 511 GYFKAHMKFPPDYPYSPPSIRVFN*SLGIQMYMKTEIFAYRFSTRPWDDPQSGEL 675
G+F A M FP +YP SPP++R + +Y + P DDP EL
Sbjct: 84 GFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRV-CISILHPPGDDPSGYEL 137
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 392 EYKSLQEEPVEGFRVKLLGED-NLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTTRIHHHP 568
EYK +Q E V ++L+ +D N+F+W I GP +T Y+ + + P +
Sbjct: 11 EYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQ 70
Query: 569 LGFLTKVW 592
+ FLTK++
Sbjct: 71 VRFLTKIF 78
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 36.3 bits (80), Expect = 0.024
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 493 GYTLSSGYFKAHMKFPPDYPYSPPSI 570
G + G++ +KFPP+YPY PP I
Sbjct: 46 GTPFAGGFYYGKIKFPPEYPYKPPGI 71
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 36.3 bits (80), Expect = 0.024
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 493 GYTLSSGYFKAHMKFPPDYPYSPPSI 570
G + G++ +KFPP+YPY PP I
Sbjct: 46 GTPFAGGFYYGKIKFPPEYPYKPPGI 71
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 34.3 bits (75), Expect = 0.096
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 362 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT 529
T+ A + L ++K LQ++P G ++N+ W IFGP DT + T + T
Sbjct: 2 TTPAKKRLMWDFKRLQKDPPVGIS-GAPQDNNIMHWNALIFGPEDTPWDGGTFKLT 56
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 34.3 bits (75), Expect = 0.096
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 362 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDT 517
T A L E+ Q P GF+ ++ DNL W + + G P TLY +T
Sbjct: 13 TKIATNRLQKEFMEWQTNPPSGFKHRV--SDNLQRWIIEVHGVPGTLYANET 62
Score = 27.9 bits (59), Expect = 8.3
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +3
Query: 594 HPNVYENGDLCISILH 641
HP++Y NG +C+ +L+
Sbjct: 89 HPHIYSNGHICLDVLY 104
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 34.3 bits (75), Expect = 0.096
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +2
Query: 347 SNTVPTSSALRALALE--YKSLQE---EPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQV 511
S++ P+ AL +A K L E P GFR K+ DNL +W + + G P TLY
Sbjct: 3 SSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVT--DNLQKWTIDVTGAPGTLYAN 60
Query: 512 DT 517
+T
Sbjct: 61 ET 62
Score = 28.3 bits (60), Expect = 6.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 594 HPNVYENGDLCISILH 641
HP++Y NG +C+ IL+
Sbjct: 89 HPHIYSNGHICLDILY 104
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 33.9 bits (74), Expect = 0.13
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
S G F ++ FPPDYP+ PP +
Sbjct: 46 SGGVFLVNIHFPPDYPFKPPKV 67
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLY 505
A R + E K LQ +P GED +F W+ I GP ++ Y
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGED-MFHWQATIMGPNESPY 45
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLY 505
A + + E K LQ++P + ED +F W+ I GPP++ Y
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAED-MFHWQATIMGPPESPY 45
Score = 31.9 bits (69), Expect = 0.51
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
+ G F + FPPDYP+ PP +
Sbjct: 46 AGGVFLVSIHFPPDYPFKPPKV 67
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDT 517
A L E Q P GF+ K+ DNL W + + G P TLY DT
Sbjct: 16 ATNRLQKELVEWQMNPPTGFKHKVT--DNLQRWIIEVIGAPGTLYANDT 62
Score = 28.3 bits (60), Expect = 6.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 594 HPNVYENGDLCISILH 641
HP++Y NG +C+ IL+
Sbjct: 89 HPHIYSNGHICLDILY 104
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 32.7 bits (71), Expect = 0.29
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
S G F + FPPDYP+ PP +
Sbjct: 47 SGGVFLVTIHFPPDYPFKPPKV 68
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 525 THEIPP*LPVFTTIH*GF*LKSGHPNVYENGDLCISIL 638
T PP P F F K HPN+ NG +C+ IL
Sbjct: 54 TIHFPPDYP-FKPPKVAFRTKVFHPNINSNGSICLDIL 90
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 32.7 bits (71), Expect = 0.29
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
S G F + FPPDYP+ PP +
Sbjct: 46 SGGVFLVTIHFPPDYPFKPPKV 67
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
A + + E K LQ++P + ED +F W+ I GP ++ Y T + P
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 551 RIHHHPLGFLTKVW 592
+ F TKV+
Sbjct: 61 PFKPPKVAFRTKVF 74
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 525 THEIPP*LPVFTTIH*GF*LKSGHPNVYENGDLCISIL 638
T PP P F F K HPN+ NG +C+ IL
Sbjct: 53 TIHFPPDYP-FKPPKVAFRTKVFHPNINSNGSICLDIL 89
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 32.7 bits (71), Expect = 0.29
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
S G F + FPPDYP+ PP +
Sbjct: 46 SGGVFLVTIHFPPDYPFKPPKV 67
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
A + + E K LQ++P + ED +F W+ I GP ++ Y T + P
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 551 RIHHHPLGFLTKVW 592
+ F TKV+
Sbjct: 61 PFKPPKVAFRTKVF 74
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 525 THEIPP*LPVFTTIH*GF*LKSGHPNVYENGDLCISIL 638
T PP P F F K HPN+ NG +C+ IL
Sbjct: 53 TIHFPPDYP-FKPPKVAFRTKVFHPNINSNGSICLDIL 89
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 32.7 bits (71), Expect = 0.29
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
S G F + FPPDYP+ PP +
Sbjct: 46 SGGVFLVTIHFPPDYPFKPPKV 67
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
A + + E K LQ++P + ED +F W+ I GP ++ Y T + P
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 551 RIHHHPLGFLTKVW 592
+ F TKV+
Sbjct: 61 PFKPPKVAFRTKVF 74
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 525 THEIPP*LPVFTTIH*GF*LKSGHPNVYENGDLCISIL 638
T PP P F F K HPN+ NG +C+ IL
Sbjct: 53 TIHFPPDYP-FKPPKVAFRTKVFHPNINSNGSICLDIL 89
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 32.7 bits (71), Expect = 0.29
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
S G F + FPPDYP+ PP +
Sbjct: 76 SGGVFLVTIHFPPDYPFKPPKV 97
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
A + + E K LQ++P + ED +F W+ I GP D+ Y T + P
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90
Query: 551 RIHHHPLGFLTKVW 592
+ F TKV+
Sbjct: 91 PFKPPKVAFRTKVF 104
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 525 THEIPP*LPVFTTIH*GF*LKSGHPNVYENGDLCISIL 638
T PP P F F K HPN+ NG +C+ IL
Sbjct: 83 TIHFPPDYP-FKPPKVAFRTKVFHPNINSNGSICLDIL 119
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 32.7 bits (71), Expect = 0.29
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
S G F + FPPDYP+ PP +
Sbjct: 46 SGGVFLVTIHFPPDYPFKPPKV 67
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
A + + E K LQ++P + ED +F W+ I GP D+ Y T + P
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 551 RIHHHPLGFLTKVW 592
+ F TKV+
Sbjct: 61 PFKPPKVAFRTKVF 74
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 525 THEIPP*LPVFTTIH*GF*LKSGHPNVYENGDLCISIL 638
T PP P F F K HPN+ NG +C+ IL
Sbjct: 53 TIHFPPDYP-FKPPKVAFRTKVFHPNINSNGSICLDIL 89
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 32.7 bits (71), Expect = 0.29
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
S G F + FPPDYP+ PP +
Sbjct: 46 SGGVFLVTIHFPPDYPFKPPKV 67
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
A + + E K LQ++P + ED +F W+ I GP D+ Y T + P
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 551 RIHHHPLGFLTKVW 592
+ F TKV+
Sbjct: 61 PFKPPKVAFRTKVF 74
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +3
Query: 525 THEIPP*LPVFTTIH*GF*LKSGHPNVYENGDLCISIL 638
T PP P F F K HPNV NG +C+ IL
Sbjct: 53 TIHFPPDYP-FKPPKVAFRTKVFHPNVNSNGSICLDIL 89
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLY 505
A + ++ E + +Q P + E+++F W+ I GP D+ Y
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPY 46
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 362 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDT 499
++ A + L ++K LQ++P G ++N+ W IFGP DT
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDT 46
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 511 GYFKAHMKFPPDYPYSPPSIR 573
G FK ++F DYP PP++R
Sbjct: 51 GTFKLSLQFSEDYPNKPPTVR 71
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 362 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDT 499
++ A + L ++K LQ++P G ++N+ W IFGP DT
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDT 46
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 511 GYFKAHMKFPPDYPYSPPSIR 573
G FK ++F DYP PP++R
Sbjct: 51 GTFKLSLQFSEDYPNKPPTVR 71
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 362 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDT 499
++ A + L ++K LQ++P G ++N+ W IFGP DT
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDT 46
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 511 GYFKAHMKFPPDYPYSPPSIR 573
G FK ++F DYP PP++R
Sbjct: 51 GTFKLSLQFSEDYPNKPPTVR 71
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 31.5 bits (68), Expect = 0.68
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
+ G F + FPPDYP+ PP +
Sbjct: 46 AGGVFLVTIHFPPDYPFKPPKV 67
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
A + + E + LQ +P G+D +F+W+ I GP D+ + T + P
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDD-MFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 551 RIHHHPLGFLTKVW 592
+ F TKV+
Sbjct: 61 PFKPPKVAFRTKVY 74
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 525 THEIPP*LPVFTTIH*GF*LKSGHPNVYENGDLCISIL 638
T PP P F F K HPN+ NG +C+ IL
Sbjct: 53 TIHFPPDYP-FKPPKVAFRTKVYHPNINSNGSICLDIL 89
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 31.5 bits (68), Expect = 0.68
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
+ G F + FPPDYP+ PP +
Sbjct: 46 AGGVFLVTIHFPPDYPFKPPKV 67
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
A + + E + LQ +P G+D +F+W+ I GP D+ + T + P
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDD-MFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 551 RIHHHPLGFLTKVW 592
+ F TKV+
Sbjct: 61 PFKPPKVAFRTKVY 74
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 525 THEIPP*LPVFTTIH*GF*LKSGHPNVYENGDLCISIL 638
T PP P F F K HPN+ NG +C+ IL
Sbjct: 53 TIHFPPDYP-FKPPKVAFRTKVYHPNINSNGSICLDIL 89
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 31.5 bits (68), Expect = 0.68
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
+ G F + FPPDYP+ PP +
Sbjct: 46 AGGVFLVTIHFPPDYPFKPPKV 67
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
A + + E K LQ++P + ED +F W+ I GP ++ Y T + P
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 551 RIHHHPLGFLTKVW 592
+ F TKV+
Sbjct: 61 PFKPPKVAFRTKVF 74
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 525 THEIPP*LPVFTTIH*GF*LKSGHPNVYENGDLCISIL 638
T PP P F F K HPN+ NG +C+ IL
Sbjct: 53 TIHFPPDYP-FKPPKVAFRTKVFHPNINSNGSICLDIL 89
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 31.5 bits (68), Expect = 0.68
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
+ G F + FPPDYP+ PP +
Sbjct: 46 AGGVFLVTIHFPPDYPFKPPKV 67
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
A + + E K LQ++P + ED +F W+ I GP ++ Y T + P
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 551 RIHHHPLGFLTKVW 592
+ F TKV+
Sbjct: 61 PFKPPKVAFRTKVF 74
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 525 THEIPP*LPVFTTIH*GF*LKSGHPNVYENGDLCISIL 638
T PP P F F K HPN+ NG +C+ IL
Sbjct: 53 TIHFPPDYP-FKPPKVAFRTKVFHPNINSNGSICLDIL 89
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDT 517
A L E Q P GF+ ++ DNL +W + + G P TLY +T
Sbjct: 16 ACNRLQKELSEWQVNPPTGFKHRVT--DNLQKWVIEVTGAPGTLYANET 62
Score = 28.3 bits (60), Expect = 6.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 594 HPNVYENGDLCISILH 641
HP++Y NG +C+ IL+
Sbjct: 89 HPHIYSNGHICLDILY 104
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 594 HPNVYENGDLCISILHPPVG*SSVWRTA 677
HPNVY +G +C+SIL+ G WR A
Sbjct: 84 HPNVYPSGTVCLSILNEDYG----WRPA 107
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 493 GYTLSSGYFKAHMKFPPDYPYSPP 564
G G F +KFP DYP+ PP
Sbjct: 48 GTPYEGGMFNLSIKFPTDYPFKPP 71
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 493 GYTLSSGYFKAHMKFPPDYPYSPPSI 570
G G F + PP YPY PP I
Sbjct: 71 GCPYEKGVFTVSVHIPPKYPYEPPKI 96
>At1g55535.2 68414.m06355 expressed protein
Length = 250
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 636 LHPPVG*SSVWRTAPANVGNPTQSVRNRYSPSGNLNPS-KEPEHLSVPGERSMPTV 800
++ P +S++ + N+ +P + N YS N +PS E H+ P RS+ ++
Sbjct: 183 IYDPAYYTSLFEESQTNINSPKATQVNHYSAGNNGSPSAAEASHIKSPIFRSLHSI 238
>At1g55535.1 68414.m06354 expressed protein
Length = 260
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 636 LHPPVG*SSVWRTAPANVGNPTQSVRNRYSPSGNLNPS-KEPEHLSVPGERSMPTV 800
++ P +S++ + N+ +P + N YS N +PS E H+ P RS+ ++
Sbjct: 183 IYDPAYYTSLFEESQTNINSPKATQVNHYSAGNNGSPSAAEASHIKSPIFRSLHSI 238
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 347 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQ 508
SN + ++ LA E KSL E P +G +V ++ +++ + I GP T Y+
Sbjct: 3 SNENLPPNVIKQLAKELKSLDESPPDGIKV-VVNDEDFSQICADIEGPVGTPYE 55
>At4g10020.1 68417.m01639 short-chain dehydrogenase/reductase (SDR)
family protein similar to sterol-binding dehydrogenase
steroleosin GI:15824408 from [Sesamum indicum]
Length = 389
Score = 24.2 bits (50), Expect(2) = 5.6
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 538 PPDYPYSPPSIRVFN 582
PP YP SPP FN
Sbjct: 371 PPRYPASPPRFSQFN 385
Score = 22.6 bits (46), Expect(2) = 5.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 496 YTLSSGYFKAHMKFPPDYPYSPP 564
YT S ++ A PP YP SPP
Sbjct: 353 YTASPPHYTAS---PPRYPASPP 372
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 347 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQ 508
+ TV + S L+ L E L G EDN+F W+ I G DT+++
Sbjct: 29 TKTVDSHSVLKRLQSELMGLMMGADPGISA-FPEEDNIFCWKGTITGSKDTVFE 81
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 594 HPNVYENGDLCISILHPPVG-*SSVWRTAPANV 689
+PN+YE+G +C+S+L+ G + VW +++
Sbjct: 738 NPNLYESGRVCLSLLNTWSGSGTEVWNAGSSSI 770
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 347 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQ 508
+ TV + S L+ L E L G EDN+F W+ I G DT+++
Sbjct: 28 TKTVDSQSVLKRLQSELMGLMMGGGPGISA-FPEEDNIFCWKGTITGSKDTVFE 80
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,530,176
Number of Sequences: 28952
Number of extensions: 449906
Number of successful extensions: 1208
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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