Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30049
(727 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 9e-24
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 85 7e-17
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 61 8e-10
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 61 8e-10
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 52 4e-07
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 51 8e-07
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 48 6e-06
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 47 1e-05
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 47 2e-05
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 46 3e-05
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 45 7e-05
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 44 2e-04
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 41 9e-04
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 40 0.002
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 39 0.004
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 38 0.008
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 38 0.008
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_57086| Best HMM Match : PT (HMM E-Value=2.4) 30 1.7
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09) 29 3.8
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_26341| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 28 6.7
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 28 6.7
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7) 28 6.7
SB_22331| Best HMM Match : fn3 (HMM E-Value=7.1e-14) 28 6.7
SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 28 6.7
SB_43963| Best HMM Match : Ammonium_transp (HMM E-Value=0) 28 8.9
SB_5106| Best HMM Match : F5_F8_type_C (HMM E-Value=3.6e-31) 28 8.9
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 109 bits (263), Expect = 2e-24
Identities = 49/67 (73%), Positives = 61/67 (91%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTATFSIS+LQ IDT +RE QAL+L+PTRELA QIQKVV+ALGD+++ +CHACIGGTN+
Sbjct: 47 KTATFSISVLQAIDTQLREPQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIG 106
Query: 434 EDIRQLE 454
EDIR+L+
Sbjct: 107 EDIRKLD 113
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +3
Query: 162 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
GFEKPSAIQQRAI P ++GRDVIAQAQSGTGK
Sbjct: 16 GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGK 47
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 487 GRVYDMIIVVRFHANTIKLFVLDEADE 567
GRV+DMI +IK+ VLDEADE
Sbjct: 124 GRVFDMIRRRNLRTRSIKMLVLDEADE 150
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 107 bits (257), Expect = 9e-24
Identities = 52/73 (71%), Positives = 63/73 (86%), Gaps = 6/73 (8%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRE------CQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 415
KTATF+ISILQ+IDT+ ++ CQAL+LAPTRELAQQIQKVV+ALGD+++ KCHACI
Sbjct: 135 KTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHVKCHACI 194
Query: 416 GGTNVREDIRQLE 454
GGTNVRED +LE
Sbjct: 195 GGTNVREDRMKLE 207
Score = 90.2 bits (214), Expect = 1e-18
Identities = 51/84 (60%), Positives = 55/84 (65%), Gaps = 22/84 (26%)
Frame = +3
Query: 72 GHLHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ------------ 215
G ++WD+VVE+FDDMNLKE LLRGIYAYGFEKPSAIQQRAI PC Q
Sbjct: 52 GKRQSNWDEVVESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQL 111
Query: 216 ----------GRDVIAQAQSGTGK 257
RDVIAQAQSGTGK
Sbjct: 112 NLTKNHYVLSARDVIAQAQSGTGK 135
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +1
Query: 487 GRVYDMIIVVRFHANTIKLFVLDEADE 567
GRV+DMI + IKLFVLDEADE
Sbjct: 218 GRVFDMINRGVLNTRDIKLFVLDEADE 244
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 84.6 bits (200), Expect = 7e-17
Identities = 36/51 (70%), Positives = 47/51 (92%)
Frame = +2
Query: 302 IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 454
+RE QAL+L+PTRELA QIQKVV+ALGD+++ +CHACIGGTN+ EDIR+L+
Sbjct: 1 LREPQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLD 51
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 61.3 bits (142), Expect = 8e-10
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA + + +L++ DT+ QAL+L PTRELA Q ++ I LG H+ A+ GGT+++
Sbjct: 97 KTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLK 156
Query: 434 EDIRQL 451
+DI +L
Sbjct: 157 DDILRL 162
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++GTGK
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 61.3 bits (142), Expect = 8e-10
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA + + +L++ DT+ QAL+L PTRELA Q ++ I LG H+ A+ GGT+++
Sbjct: 97 KTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLK 156
Query: 434 EDIRQL 451
+DI +L
Sbjct: 157 DDILRL 162
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++GTGK
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 430
KT FS+ L+ + T Q +IL PTRE+A Q++ V+ A+G H + C IGG ++
Sbjct: 63 KTCVFSVIALENVITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISL 122
Query: 431 REDIRQLE 454
ED + L+
Sbjct: 123 EEDKKALK 130
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/49 (55%), Positives = 32/49 (65%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F + L LLRG+ GFEKPS IQ +AI G D+IAQA+SGTGK
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGK 63
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 51.2 bits (117), Expect = 8e-07
Identities = 26/49 (53%), Positives = 29/49 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D LK ELLR I GFE PS +Q I I G D+I QA+SG GK
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGK 97
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F ++ LQQ++ + L++ TRELA QI K ++ N K GG N+
Sbjct: 97 KTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINI 156
Query: 431 REDIRQLE 454
++D + L+
Sbjct: 157 KKDQQTLK 164
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 51.2 bits (117), Expect = 8e-07
Identities = 26/49 (53%), Positives = 29/49 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D LK ELLR I GFE PS +Q I I G D+I QA+SG GK
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGK 97
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F ++ LQQ++ + L++ TRELA QI K ++ N K GG N+
Sbjct: 97 KTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINI 156
Query: 431 REDIRQLE 454
++D + L+
Sbjct: 157 KKDQQTLK 164
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 430
KT F++ ILQ + + + ALIL PTRELA QI + ALG + KC +GG ++
Sbjct: 14 KTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDM 72
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +3
Query: 30 RIKVVTMDLREWTLG-HLH-TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIM 203
R+ +D W G H+ D + +E+F D+NL EL + F+ P+ IQ +++
Sbjct: 45 RLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLS 104
Query: 204 PCIQGRDVIAQAQSGTGKLL 263
+ GRD+I A++G+GK L
Sbjct: 105 CVMSGRDIIGLAETGSGKTL 124
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDV--IAQAQSGTGK 257
++F+++ L L RG+Y GF KPS IQ+ A+ + V IAQ+QSGTGK
Sbjct: 103 KSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGK 155
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 388
KTA F +++L ++D + Q + L+PT ELA+Q KV A+G H
Sbjct: 155 KTAAFVLTMLSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKH 199
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
VE F D + + L G+ GF P+ IQ++ I + GRDV+ A++G+GK L L
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFL 105
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +2
Query: 254 KTATFSISILQ----QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
KT F I I++ Q TS+ AL+++PTRELA Q +V++ +G+ + IGG
Sbjct: 100 KTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGG 159
Query: 422 TNVREDIRQL 451
+++ + +++
Sbjct: 160 KDLKNEQKRI 169
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+G+GK
Sbjct: 710 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGK 761
Score = 35.1 bits (77), Expect = 0.058
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 314 QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 454
QA+ +APTRELA QI + C GG +V +RQL+
Sbjct: 790 QAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQ 836
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+G+GK
Sbjct: 133 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGK 184
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 427
KTA F I + +++ T + +ALIL+PTRELA Q QK + LG K +GG +
Sbjct: 331 KTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFIKELGRFTGLKSSVILGGDS 390
Query: 428 V 430
V
Sbjct: 391 V 391
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/50 (44%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGK 257
F+D++L E LL + G++KP+ +Q+ AI P ++G RD++A AQ+G+GK
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAI-PIVKGKRDLMACAQTGSGK 925
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +2
Query: 320 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 454
L+L PTRELAQQ+Q+V ++G H + GG IR+LE
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELE 180
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +3
Query: 123 NLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
++ E+ L+GI GF + IQ ++I P ++GRD++ A++G+GK L L
Sbjct: 578 DVSEKTLQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFL 627
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 320 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 454
+I++PTREL+ Q V L H N +GG N + + +L+
Sbjct: 648 IIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQ 692
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/52 (32%), Positives = 35/52 (67%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+ +F+++ E+L+ I G+ +P+ +Q+ A+ + GRD++A AQ+G+GK
Sbjct: 478 ITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGK 529
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = +2
Query: 254 KTATFSISIL-----QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 418
KTA + + +L Q ++ R AL +APTRELA+QI DH K C G
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYG 588
Query: 419 GTNVREDIRQLE 454
G +V QLE
Sbjct: 589 GVSVPYQASQLE 600
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F + L + L+ A G +KP+ IQ + P +QGRD I A++G+GK
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGK 57
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = +2
Query: 224 CYRSSPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 403
C + + KTA F++ ILQ++ A++L PTRELA QI LG + K
Sbjct: 47 CIGCAKTGSGKTAAFALPILQKLCDDPYGIFAVVLTPTRELAFQIADQFKVLGRPIGLKE 106
Query: 404 HACIGGTNVREDIRQL 451
+GG ++ + L
Sbjct: 107 AVIVGGLDMMKQALSL 122
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +2
Query: 389 LNAKCHACIGGTNVREDIRQLE 454
++ KCHACIGGTNVRED +LE
Sbjct: 1 MHVKCHACIGGTNVREDRMKLE 22
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 317 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 427
ALILAPTRELAQQI++ ++ G L + + IGG +
Sbjct: 181 ALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGAD 217
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+ + + + + +L + G++ P+ IQ++AI +Q RD+I A++G+GK
Sbjct: 100 IRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGK 151
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLS 269
F + E L + + +G+ P+ IQ + + + GRDV+ A +G+GKLL S
Sbjct: 198 FFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGKLLPS 250
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC-IQGRDVIAQAQSGTGKLL 263
++ + + ++LR + GF KP+ IQ +I P + RD+I A++G+GK L
Sbjct: 132 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTL 183
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 317 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 454
ALI+APTRELA Q++ ++ + + K A +GG + R L+
Sbjct: 221 ALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLK 266
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 93 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
D+V+ +D ++ + E R + GF P+ IQ I + G+DV A A +GTGK
Sbjct: 7 DEVLNAYDSLDEEAED-RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGK 60
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +3
Query: 96 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
Q V +F + L++++L+ + A +P+ IQ I I VI AQ+G+GK L L
Sbjct: 375 QRVYSFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYL 433
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 302 IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
++ +A I+ P RELA QI K +L H + IGG
Sbjct: 453 LKRPRACIVVPARELATQILKTAKSLCHHARFRSVGLIGG 492
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 305 RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 454
R+ A+++ PTRELA QI + N +C GGT + E I +L+
Sbjct: 143 RDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELK 192
Score = 35.9 bits (79), Expect = 0.033
Identities = 18/59 (30%), Positives = 35/59 (59%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYR 278
V+T+ ++ ++L + +EKP+ IQ +AI + GRD+IA + T +L + ++R
Sbjct: 104 VKTWAQTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHR 162
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 35.1 bits (77), Expect = 0.058
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLY 275
+F E+++ I + +P+ IQ +A+ + GRD+I A++G+GK L+
Sbjct: 518 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLW 573
Score = 32.3 bits (70), Expect = 0.41
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = +2
Query: 320 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 454
LI APTREL QQI G N A GG N E + L+
Sbjct: 594 LICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQ 638
>SB_57086| Best HMM Match : PT (HMM E-Value=2.4)
Length = 226
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 497 YTRPWSAHHVHEH-HSPVGEYLHGHWCHQCKHGI*HSSDHQ 378
YT P++ + H + H +Y H + HQC H H HQ
Sbjct: 175 YTHPYTHPYTHPYTHQYTHQYPH-QYTHQCTHQYTHQYTHQ 214
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -3
Query: 497 YTRPWSAHHVHEH-HSPVGEYLHGHWCHQCKHGI*HSSDHQELSP 366
YT ++ + H++ H +Y H + HQC H H H P
Sbjct: 139 YTHQYTHQYTHQYTHQYTHQYTH-QYTHQCTHPYTHQYTHPYTHP 182
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 497 YTRPWSAHHVHEH-HSPVGEYLHGHWCHQCKHGI*HSSDHQ 378
YT ++ H+ H++ H +Y H + HQ H H HQ
Sbjct: 2 YTHQYTHHYTHQYTHQYPHQYTH-QYTHQYPHQYPHQYTHQ 41
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -3
Query: 497 YTRPWSAHHVHEHHSPVGEYLHGHWCHQCKHGI*HSSDHQ 378
YT P++ + H++ +Y H + HQ H H HQ
Sbjct: 74 YTHPYTHPYTHQY---THQYTHHQYTHQYTHQYPHQYPHQ 110
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC-IQGRDVIAQAQS 245
++ + + ++LR + GF KP+ IQ +I P + RD+I A++
Sbjct: 74 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAET 119
>SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 476 HHVHEHHSPVGEYLHGHWCHQCKHGI*HSSDHQELS 369
HH H+HH ++ H H H +H H DH ++
Sbjct: 11 HHHHDHHHHDHQH-HDHQHHDHQHHDHHHHDHHHMT 45
>SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09)
Length = 304
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 509 IIISYTRPWSAHHVHEHHSPVGEYLHGHWCHQCKH 405
III T + HH H +H + + H HW H H
Sbjct: 143 IIIIITIVIAIHHHHYYHHHLLHHHHHHWHHHHHH 177
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 488 PWSAHHVHEHHSPVGEYLHGHWCHQCKHGI*HSSDHQELS-PPS 360
PW+ H +H +P G+Y +HG H++ E + PPS
Sbjct: 479 PWNMQHPPQHRAPPGQYPPLGASPPVQHGRGHATGRGEFAGPPS 522
>SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 287 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 415
Q D++++E IL ELA++IQK++ LN K AC+
Sbjct: 58 QGDSTLKEPVQKILIIGLELAKEIQKLIDEASSGLNIKHAACL 100
>SB_26341| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 329
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 476 HHVHEHHSPVGEYLHGHWCHQCKHGI*HSSDHQELSPP 363
HH+ H G HGH H+ +H HSS +Q +PP
Sbjct: 272 HHLEPEHEEHGHGGHGHGDHEREH---HSSQNQ--APP 304
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Frame = +2
Query: 254 KTATFSISILQQI-DTSI-----RECQALILAPTRELAQQIQKVVIALGDHLNAKC 403
KT +F++ +++++ D + R + L++APTRELA+Q+ L +L C
Sbjct: 123 KTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENLKSNLEVYC 178
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 8/75 (10%)
Frame = -3
Query: 581 SGTTFSSASSRTKSLMVLA*KRTTII-------ISYTRPWSAH-HVHEHHSPVGEYLHGH 426
S TT ++ T +++++ TTII + Y R H H H HH + H H
Sbjct: 172 SSTTIVVTTNNTITIIIITITSTTIITMPSPSIVIYRRHHQHHQHHHHHHHQHNHHHHHH 231
Query: 425 WCHQCKHGI*HSSDH 381
H H H H
Sbjct: 232 NHHHHHHHHYHHYHH 246
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -3
Query: 476 HHVHEHHSPVGEYLHGHWCHQCKHGI*HSSDHQE 375
HH H HH + H H H H H HQ+
Sbjct: 258 HHHHHHHHQHNHHQHHHHHHHHHHN--HHHHHQQ 289
>SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 590
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 515 TTIIISYTRPWSAHHVHEHHSPVGE 441
T III T P + HH H HH P G+
Sbjct: 408 THIIIIIT-PLANHHSHHHHHPSGQ 431
>SB_22331| Best HMM Match : fn3 (HMM E-Value=7.1e-14)
Length = 908
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -2
Query: 597 WSLENLWNNIFISFIKNKKFDGVGMKAHDDYHII---YTTLECPPR 469
W +E LW+N F I ++ +G+ K D + ++ ++EC PR
Sbjct: 69 WGVERLWSNTFELLIGDQS-NGLNPKCGDRHAVLPYDMISIECNPR 113
>SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 403 AFSIQVITKSYHHLLNLLGQLSCGSQDQSLTFTNACID 290
A ++Q +TK+Y HL+N+ G +++ T C D
Sbjct: 201 AHALQTLTKAYRHLMNVTGN---RDKEEKANATEQCAD 235
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -3
Query: 506 IISYTRPWSAHHVHEHHSPVGEYLHGHWCHQCKHGI*HSSDH 381
I + T P+ HH H H + H H H+ +H H H
Sbjct: 300 ITTATPPYRYHHHHHHRHHHHHHHHHHQRHRHRHRHRHRHHH 341
>SB_43963| Best HMM Match : Ammonium_transp (HMM E-Value=0)
Length = 730
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 515 TTIIISYTRPWSAHHVHEH 459
TTII++ ++P S HH H H
Sbjct: 556 TTIIVTSSKPLSHHHHHHH 574
>SB_5106| Best HMM Match : F5_F8_type_C (HMM E-Value=3.6e-31)
Length = 445
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -2
Query: 597 WSLENLWNNIFISFIKNKKFDGVGMKAHDDYHII---YTTLECPPR 469
W +++LW+N F I ++ +G+ K D + ++ ++EC PR
Sbjct: 224 WGIQHLWSNTFELLIGDQS-NGLNPKCGDRHAVLPYDMISIECNPR 268
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,070,063
Number of Sequences: 59808
Number of extensions: 560562
Number of successful extensions: 2322
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 2026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2279
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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