Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30036
(699 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 153 3e-36
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 140 4e-32
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 125 9e-28
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 120 5e-26
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 118 2e-25
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 111 2e-23
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 109 6e-23
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 102 1e-20
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 101 2e-20
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 95 2e-18
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 91 2e-17
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 90 4e-17
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 80 4e-14
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 77 3e-13
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 75 2e-12
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 69 1e-10
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 66 1e-09
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 54 3e-06
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 52 1e-05
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 52 1e-05
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 51 3e-05
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 43 0.006
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 39 0.10
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 39 0.14
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 37 0.41
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 36 0.72
UniRef50_Q87BL9 Cluster: DNA helicase; n=5; Xylella fastidiosa|R... 36 1.3
UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_A4F9H9 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 35 1.7
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 34 2.9
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 34 3.9
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 33 5.1
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 33 5.1
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 6.7
UniRef50_Q9SZU4 Cluster: Putative uncharacterized protein F6G17.... 33 6.7
UniRef50_A7S0H0 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.7
UniRef50_Q55JL4 Cluster: Putative uncharacterized protein; n=2; ... 33 6.7
UniRef50_Q2TZP1 Cluster: Predicted RNA-binding protein homologou... 33 6.7
UniRef50_Q1DMY3 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A7F286 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 6.7
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 8.9
UniRef50_A6R232 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 8.9
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 33 8.9
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 153 bits (372), Expect = 3e-36
Identities = 73/104 (70%), Positives = 85/104 (81%)
Frame = +1
Query: 256 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 435
VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCY
Sbjct: 99 VLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCY 158
Query: 436 AQHTQVRAIRKKMCEIITRDVTNSDSGRW*TS*FPDSIAKDIEK 567
AQH+Q++ IR KM II R++T++D PDSIAKDIEK
Sbjct: 159 AQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEK 202
Score = 150 bits (363), Expect = 4e-35
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
KKG KKK+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVFEVSLAD
Sbjct: 14 KKGSKKKVVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLAD 73
Query: 182 LQADTDAERSFRKFRLIAEYVQGR 253
LQ + DAERSFRKF+L+AE V GR
Sbjct: 74 LQNEPDAERSFRKFKLVAESVNGR 97
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 140 bits (338), Expect = 4e-32
Identities = 67/103 (65%), Positives = 78/103 (75%)
Frame = +1
Query: 259 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 438
L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YA
Sbjct: 97 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYA 156
Query: 439 QHTQVRAIRKKMCEIITRDVTNSDSGRW*TS*FPDSIAKDIEK 567
QH QVR IRKKM EI+TR+V +D PDSI KDIEK
Sbjct: 157 QHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEK 199
Score = 132 bits (318), Expect = 1e-29
Identities = 63/86 (73%), Positives = 73/86 (84%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLAD
Sbjct: 14 KKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLAD 73
Query: 182 LQADTDAERSFRKFRLIAEYVQGRMC 259
LQ D E +FRKF+LI E VQG+ C
Sbjct: 74 LQND---EVAFRKFKLITEDVQGKNC 96
Score = 33.5 bits (73), Expect = 5.1
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +3
Query: 510 LREVVNKLIS*LHCQGHREGPAMASYPLRDVWHPKVKVLKRAPFSEISKLI 662
L+EVVNKLI E + YPL DV+ KVK+LK+ F E+ KL+
Sbjct: 181 LKEVVNKLIPD-SIGKDIEKACQSIYPLHDVFVRKVKMLKKPKF-ELGKLM 229
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 125 bits (302), Expect = 9e-28
Identities = 60/104 (57%), Positives = 74/104 (71%)
Frame = +1
Query: 256 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 435
VL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCY
Sbjct: 491 VLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCY 550
Query: 436 AQHTQVRAIRKKMCEIITRDVTNSDSGRW*TS*FPDSIAKDIEK 567
AQ +Q+R IR+KM EI+T T+ D P+SI ++IEK
Sbjct: 551 AQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEK 594
Score = 124 bits (299), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
KKG KKK DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE+SLAD
Sbjct: 408 KKGGKKKAADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLAD 467
Query: 182 LQADTDAERSFRKFRLIAEYVQGR 253
LQAD D +++RK RL AE VQGR
Sbjct: 468 LQADED--QAYRKIRLRAEDVQGR 489
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 120 bits (288), Expect = 5e-26
Identities = 58/86 (67%), Positives = 69/86 (80%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
KKG KKK VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG VFE+SLAD
Sbjct: 14 KKGAKKKAVDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLAD 73
Query: 182 LQADTDAERSFRKFRLIAEYVQGRMC 259
LQ D E +FRKF+LI E VQG+ C
Sbjct: 74 LQND---EVAFRKFKLITEDVQGKRC 96
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 118 bits (283), Expect = 2e-25
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
KKG KKK+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ GRVFEVSLAD
Sbjct: 14 KKGAKKKVVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLAD 70
Query: 182 LQADTDAERSFRKFRLIAEYVQGRMC 259
LQ D E +FRKF+LI E VQG+ C
Sbjct: 71 LQND---EVAFRKFKLITEDVQGKNC 93
Score = 38.3 bits (85), Expect = 0.18
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +1
Query: 460 IRKKMCEIITRDVTNSDSGRW*TS*FPDSIAKDIEK 567
IRKKM EI+TR+V +D PDSI KD+EK
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEK 146
Score = 33.5 bits (73), Expect = 5.1
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +3
Query: 510 LREVVNKLIS*LHCQGHREGPAMASYPLRDVWHPKVKVLKRAPFSEISKLI 662
L+EVVNKLI E + YPL DV+ KVK+LK+ F E+ KL+
Sbjct: 128 LKEVVNKLIPD-SIGKDVEKACQSIYPLHDVFVRKVKMLKKPKF-ELGKLM 176
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 111 bits (267), Expect = 2e-23
Identities = 53/102 (51%), Positives = 73/102 (71%)
Frame = +1
Query: 205 KVFPQIQINRRICARTYVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 384
+VF +I++ VL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF
Sbjct: 78 QVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVF 137
Query: 385 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSD 510
I FT K ++KT YA+ ++V+AIRKKM +I+T V+++D
Sbjct: 138 AICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSND 179
Score = 99 bits (238), Expect = 5e-20
Identities = 55/90 (61%), Positives = 67/90 (74%), Gaps = 6/90 (6%)
Frame = +2
Query: 2 KKGVKK--KIVDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVF 163
KKG KK K VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+
Sbjct: 6 KKGSKKGGKKVDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVY 65
Query: 164 EVSLADLQADTDAERSFRKFRLIAEYVQGR 253
EVSLAD++ D + FRK +L AE V+GR
Sbjct: 66 EVSLADMK--DDESQVFRKIKLRAEEVEGR 93
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 109 bits (262), Expect = 6e-23
Identities = 52/86 (60%), Positives = 64/86 (74%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
KKG+KKK DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR+FEVSLAD
Sbjct: 13 KKGLKKKTQDPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLAD 72
Query: 182 LQADTDAERSFRKFRLIAEYVQGRMC 259
LQ D D +FRK +L + VQG+ C
Sbjct: 73 LQKDED--HAFRKIKLRVDEVQGKNC 96
Score = 107 bits (256), Expect = 3e-22
Identities = 51/103 (49%), Positives = 70/103 (67%)
Frame = +1
Query: 259 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 438
L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA
Sbjct: 97 LTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYA 156
Query: 439 QHTQVRAIRKKMCEIITRDVTNSDSGRW*TS*FPDSIAKDIEK 567
+Q+RAIR+KM EII R+ + + P+ I ++IEK
Sbjct: 157 ASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEK 199
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 102 bits (244), Expect = 1e-20
Identities = 44/81 (54%), Positives = 63/81 (77%)
Frame = +1
Query: 268 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 447
FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+
Sbjct: 102 FHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSA 161
Query: 448 QVRAIRKKMCEIITRDVTNSD 510
Q++ IRK M +IT++ + +
Sbjct: 162 QIKKIRKIMNNLITKEAASRE 182
Score = 88.6 bits (210), Expect = 1e-16
Identities = 44/86 (51%), Positives = 58/86 (67%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
KKG K+KI +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LAD
Sbjct: 15 KKGSKRKIAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLAD 74
Query: 182 LQADTDAERSFRKFRLIAEYVQGRMC 259
L + KF+ E V G+ C
Sbjct: 75 LMENEKFGAYNYKFK--CEDVNGKDC 98
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 101 bits (242), Expect = 2e-20
Identities = 50/102 (49%), Positives = 65/102 (63%)
Frame = +1
Query: 253 YVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTC 432
+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I FT K Q+
Sbjct: 21 HCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVIAFTKKQE-DQKSHA 79
Query: 433 YAQHTQVRAIRKKMCEIITRDVTNSDSGRW*TS*FPDSIAKD 558
YAQ T+++ +R ++ E++ R+V D PDSI +D
Sbjct: 80 YAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQD 121
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 94.7 bits (225), Expect = 2e-18
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Frame = +1
Query: 265 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCY 435
+F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S S TCY
Sbjct: 102 SFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCY 161
Query: 436 AQHTQVRAIRKKMCEIITRDVTNSDSGRW*TS*FPDSIAKDIEK 567
A+ +QVRAIR+K+ IT + + + + K IEK
Sbjct: 162 AKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEK 205
Score = 91.9 bits (218), Expect = 1e-17
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
KKG KK+ +DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LAD
Sbjct: 15 KKGAKKRTIDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLAD 74
Query: 182 LQADTDAERSFRKFRLIAEYVQGR 253
L+ D ++++RK +L+ + V GR
Sbjct: 75 LK-DNSNDKAWRKVKLVIDEVDGR 97
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
K+G + K + RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LAD
Sbjct: 14 KRGKRGKAQETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLAD 73
Query: 182 LQADTDAERSFRKFRLIAEYVQGR 253
L E ++RK R + VQGR
Sbjct: 74 LNQSAGEEEAYRKVRFTVQEVQGR 97
Score = 76.2 bits (179), Expect = 7e-13
Identities = 30/79 (37%), Positives = 52/79 (65%)
Frame = +1
Query: 256 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 435
+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F + FT + Q + CY
Sbjct: 99 LLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCY 158
Query: 436 AQHTQVRAIRKKMCEIITR 492
A+ V+ +R ++ ++I R
Sbjct: 159 AKQRLVKWLRMRITKMIKR 177
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/101 (42%), Positives = 66/101 (65%)
Frame = +1
Query: 265 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH 444
+F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ
Sbjct: 98 SFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQR 157
Query: 445 TQVRAIRKKMCEIITRDVTNSDSGRW*TS*FPDSIAKDIEK 567
+Q++ IRKK+ EI+ ++V+ + +S+AK+I K
Sbjct: 158 SQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGK 198
Score = 83.0 bits (196), Expect = 6e-15
Identities = 39/86 (45%), Positives = 59/86 (68%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
KKG +KK +DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLAD
Sbjct: 12 KKG-QKKTIDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLAD 70
Query: 182 LQADTDAERSFRKFRLIAEYVQGRMC 259
LQ +D + ++RK +LI + V+G C
Sbjct: 71 LQGQSD-QMAWRKVKLIIDDVEGTRC 95
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/100 (39%), Positives = 60/100 (60%)
Frame = +1
Query: 268 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 447
F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T + +KTCY +H+
Sbjct: 52 FDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHS 111
Query: 448 QVRAIRKKMCEIITRDVTNSDSGRW*TS*FPDSIAKDIEK 567
+ IRK M ++I +++ D + +++ K IE+
Sbjct: 112 DEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEE 151
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 77.4 bits (182), Expect = 3e-13
Identities = 34/81 (41%), Positives = 52/81 (64%)
Frame = +1
Query: 268 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 447
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 448 QVRAIRKKMCEIITRDVTNSD 510
Q RA+R+++ +II ++ N D
Sbjct: 156 QKRALRRRITDIIIKEGINMD 176
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/86 (41%), Positives = 55/86 (63%)
Frame = +1
Query: 232 RRICARTYVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS 411
R I A + V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K +
Sbjct: 84 RSIAAGSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLA 143
Query: 412 LSQRKTCYAQHTQVRAIRKKMCEIIT 489
S + YA + R +R M + +T
Sbjct: 144 NSHKNHTYANSHKARQVRDVMIKALT 169
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 68.5 bits (160), Expect = 1e-10
Identities = 39/82 (47%), Positives = 51/82 (62%)
Frame = +2
Query: 8 GVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 187
G ++K +KD YDVKA +MF+ R +G T V R Q TK+ S GL G VFE SLA LQ
Sbjct: 1 GARRKTARRAKKKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQ 60
Query: 188 ADTDAERSFRKFRLIAEYVQGR 253
D + RKF+LI E ++G+
Sbjct: 61 ND---KVVVRKFKLITEDMRGK 79
Score = 67.7 bits (158), Expect = 3e-10
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Frame = +1
Query: 259 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF-TNKDSLSQRKTCY 435
L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G+ TN + R+
Sbjct: 82 LTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVC 140
Query: 436 AQHTQVRAIRKKMCEIITRDVTNSDSGRW*TS*FPDSIAKDIEKGLPWHLTLCAMFGIRK 615
AQ+ QV I +I+ D +D PD++ KD+EK + L +F +RK
Sbjct: 141 AQYQQVHQIWLITIQIM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVF-VRK 197
Query: 616 *K 621
K
Sbjct: 198 VK 199
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/86 (36%), Positives = 48/86 (55%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
KK ++K DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L D
Sbjct: 11 KKITQRKNPDPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGD 70
Query: 182 LQADTDAERSFRKFRLIAEYVQGRMC 259
L + KF L + V C
Sbjct: 71 LNPGAEDLNGNTKFYLQTQLVSDGKC 96
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +1
Query: 259 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 438
L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I FT++ +RK C+
Sbjct: 97 LTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHV 156
Query: 439 QHTQVRAIRKKMCEIITRDV 498
+ +R +R + E + ++
Sbjct: 157 KGRVIRMMRAGIYETLHNEL 176
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTT 103
KKG KKK++D F++KDWYDVKA +MF+ R +G T
Sbjct: 14 KKGAKKKVIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = -3
Query: 250 SLHIFGD*SEFAERPFRVSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHR 71
SLH+ G S+ + + L ISQGN ++S L+ FR + S + +K A++ AE R
Sbjct: 61 SLHVLGSQSDLPVG--MILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDR 118
Query: 70 RSLDIVPIFASEWVDNLLLNTFF 2
R L+++P+ S+ V LLL++ F
Sbjct: 119 RRLNVIPVLLSKRVGCLLLSSLF 141
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/79 (37%), Positives = 50/79 (63%)
Frame = +1
Query: 274 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 453
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K A+ +Q+
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQM 134
Query: 454 RAIRKKMCEIITRDVTNSD 510
+AIR+ M +I+ + + +D
Sbjct: 135 QAIREMMVDIVKKRASETD 153
Score = 32.7 bits (71), Expect = 8.9
Identities = 13/35 (37%), Positives = 26/35 (74%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTL 106
+K V++K+ D + K+WY+++AP+ ++ VGTT+
Sbjct: 3 RKKVQRKL-DGWKSKEWYNIEAPAYLNRVIVGTTM 36
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 50.8 bits (116), Expect = 3e-05
Identities = 31/101 (30%), Positives = 53/101 (52%)
Frame = +1
Query: 259 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 438
L F G++LT D +R +V+K + + A +VKT DG V+R+ +G T + +K+
Sbjct: 88 LTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTAQKS--- 144
Query: 439 QHTQVRAIRKKMCEIITRDVTNSDSGRW*TS*FPDSIAKDI 561
A+RKKM E + + DSG++ ++A D+
Sbjct: 145 ------AMRKKMIETLVKKAAELDSGQFLKEILEGTLAADL 179
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 43.2 bits (97), Expect = 0.006
Identities = 30/87 (34%), Positives = 44/87 (50%)
Frame = +1
Query: 250 TYVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 429
T F G L D +R +V++ + I+ IDV T DGY +RV + FT T
Sbjct: 69 TTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT---------T 119
Query: 430 CYAQHTQVRAIRKKMCEIITRDVTNSD 510
A+ +Q RAIRK+M ++I + D
Sbjct: 120 RRAKTSQQRAIRKEMFKVIEENAKECD 146
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 39.1 bits (87), Expect = 0.10
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +2
Query: 20 KIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 199
K VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D
Sbjct: 7 KKVDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGDWT 59
Query: 200 AERSFRKFRL 229
+ FR+
Sbjct: 60 KQNIKMIFRI 69
Score = 38.3 bits (85), Expect = 0.18
Identities = 25/76 (32%), Positives = 43/76 (56%)
Frame = +1
Query: 265 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH 444
+F G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K A+
Sbjct: 80 SFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK---------RART 130
Query: 445 TQVRAIRKKMCEIITR 492
+Q+ +IR+ M ++ +
Sbjct: 131 SQIESIRQIMINVVNK 146
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 38.7 bits (86), Expect = 0.14
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +1
Query: 250 TYVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 429
T F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S KT
Sbjct: 80 TNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT 139
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 37.1 bits (82), Expect = 0.41
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 280 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 426
+LT D LR +V++ + +EA+I V TTD Y +RV + T K + SQ K
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKKADRSQEK 132
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 36.3 bits (80), Expect = 0.72
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = +1
Query: 268 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 447
F G +L D +R + ++ + + +V T DGY LRV + FT R+ C + +
Sbjct: 79 FKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTS 129
Query: 448 QVRAIRKKMCEIITRDVTNS 507
Q AIRK M EI+ + S
Sbjct: 130 QKSAIRKVMQEIVEQKARES 149
>UniRef50_Q87BL9 Cluster: DNA helicase; n=5; Xylella fastidiosa|Rep:
DNA helicase - Xylella fastidiosa (strain Temecula1 /
ATCC 700964)
Length = 1190
Score = 35.5 bits (78), Expect = 1.3
Identities = 31/131 (23%), Positives = 47/131 (35%)
Frame = +2
Query: 8 GVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 187
G++++ D W + + + Q T + A GL +VSLAD
Sbjct: 548 GMQRQCDDRLQEHSWAVTRGEKVLHEEQCHITTWQAALAKESALTGLMEAAGQVSLADCD 607
Query: 188 ADTDAERSFRKFRLIAEYVQGRMCSATSTAWTSQPISSGGWLKNGRLSSKPTLM*RQPMD 367
A D FR F L Y +GR S + G K G + +P R +
Sbjct: 608 ALADTSIRFRIFLLTTHYWEGRWLSEMQAQLPAD--LDGEKKKTGGTAVEPRWRRRMKLT 665
Query: 368 TFYVSSALVSP 400
VS+ + P
Sbjct: 666 PCIVSTLFMLP 676
>UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1;
Desulfovibrio desulfuricans G20|Rep: Putative
uncharacterized protein - Desulfovibrio desulfuricans
(strain G20)
Length = 351
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -2
Query: 566 FSMSLAMESGNQLVHHLPESELVTSRVMISHIFFLIALT*VCWA*HVLRWLKESLLVKPM 387
F +S +S +L+H + + + + FF+ LT + A H +RWL+E+ ++ +
Sbjct: 106 FILSAMRDSNGRLLHRWRNGKASVTACLDDYAFFIAGLTALYEATHEVRWLREAAALQQV 165
Query: 386 QKT 378
Q T
Sbjct: 166 QDT 168
>UniRef50_A4F9H9 Cluster: Putative uncharacterized protein; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep: Putative
uncharacterized protein - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 414
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +2
Query: 173 LADLQADTDAERSFRK-FRLIAEYVQGRMCSATSTAWTSQ-PISSGGWLKNGRLSSKPTL 346
+ D++AD R++ + FR+ AE + G + + T TS P++S G+ K+GR ++PT+
Sbjct: 87 IGDMEADPVKARAWAEVFRMSAEEIPGFVSALTPEQLTSDTPVTSHGY-KDGRFDARPTV 145
Query: 347 M 349
+
Sbjct: 146 L 146
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 35.1 bits (77), Expect = 1.7
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +1
Query: 280 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 459
+LT D LR +V++ + +EA I V TTD Y +++ + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKA 133
Query: 460 IRKKMCEII 486
IR+ M +++
Sbjct: 134 IRRTMIDLV 142
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 34.3 bits (75), Expect = 2.9
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 268 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLSQRKTCYAQH 444
F +LT + L + ++ + IE +DV T DGY LRV + FT + SQ++ A
Sbjct: 85 FWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVRRCKTSQKRAIRAIM 144
Query: 445 TQV 453
Q+
Sbjct: 145 RQI 147
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 33.9 bits (74), Expect = 3.9
Identities = 20/86 (23%), Positives = 42/86 (48%)
Frame = +1
Query: 247 RTYVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 426
+ ++ F+G L+ D + MV K L+E +I + T V+ +F + +T +L
Sbjct: 91 KMFIRTTFNGFRLSYDFIFSMVLKPTKLVEFSIKINTLKKKVVEIFVL-YTITKNLHSNS 149
Query: 427 TCYAQHTQVRAIRKKMCEIITRDVTN 504
Y + +++R I ++ I + + N
Sbjct: 150 ITYGKRSRIRKINRESILCIKKMLEN 175
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 33.5 bits (73), Expect = 5.1
Identities = 22/91 (24%), Positives = 40/91 (43%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
K ++++ D + K WY +K P F +++G T + L GR EV++ +
Sbjct: 3 KAKARRRVRDTWKEKSWYTIKTPVNFEDKEIGETPAR-------DPDYLIGRGVEVTMRE 55
Query: 182 LQADTDAERSFRKFRLIAEYVQGRMCSATST 274
L D + + K R + V G + + T
Sbjct: 56 LSG--DFSKQYIKLRFEIDNVAGDVANTKFT 84
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 33.5 bits (73), Expect = 5.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 268 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 399
F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 87 FAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 6.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 498 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 391
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_Q9SZU4 Cluster: Putative uncharacterized protein F6G17.90;
n=2; Arabidopsis thaliana|Rep: Putative uncharacterized
protein F6G17.90 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 471
Score = 33.1 bits (72), Expect = 6.7
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 461 SERKCVKSLHATSLTLTQGGGEQVDFL-TPLPRTSRRACHGILPSARCLASESESVEEGP 637
SE K VKS +S ++ E D L + + + RR I+P + +E S+EEGP
Sbjct: 349 SEEKPVKSASVSSHHVSPEDDETTDILLSEILASKRREGKSIIPDKNLVKTEQASIEEGP 408
>UniRef50_A7S0H0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 652
Score = 33.1 bits (72), Expect = 6.7
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Frame = +3
Query: 180 IYKLTLTR-KGLSANSD*SPNMCKDVCALQLPRHGPH------NR*AQVDG*KMADSH 332
++KLT+T KGL+ + + N+ KDV + R GP NR A++DG K +D H
Sbjct: 361 VFKLTVTDDKGLTGSGTVAVNVKKDVNQAPVARAGPDVVVHLPNRAAELDGSKSSDDH 418
>UniRef50_Q55JL4 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1281
Score = 33.1 bits (72), Expect = 6.7
Identities = 16/77 (20%), Positives = 41/77 (53%)
Frame = +2
Query: 365 DTFYVSSALVSPIRTP*ANARRATPSTLRSEQSERKCVKSLHATSLTLTQGGGEQVDFLT 544
D ++S + + I++P +++ P T R S+++ + + +T+++ + G+Q LT
Sbjct: 1178 DYDHLSFSTTASIKSPPSHSAALLPETKRHPHSQQQRIATPSSTNISTSDQDGKQEGSLT 1237
Query: 545 PLPRTSRRACHGILPSA 595
P+ T+ + P++
Sbjct: 1238 PVGPTTSKGSQSFQPTS 1254
>UniRef50_Q2TZP1 Cluster: Predicted RNA-binding protein homologous
to eukaryotic snRNP; n=13; Pezizomycotina|Rep: Predicted
RNA-binding protein homologous to eukaryotic snRNP -
Aspergillus oryzae
Length = 1103
Score = 33.1 bits (72), Expect = 6.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 248 GRMCSATSTAWTSQPISSGGWLKNGRLSSKPTLM*RQPMDTFYV 379
G +C ATS+AW S+ + S W++ +++ + PM F V
Sbjct: 615 GNLCVATSSAWDSKAVMSAWWVQASQITKTAEVGGLLPMGDFLV 658
>UniRef50_Q1DMY3 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 569
Score = 33.1 bits (72), Expect = 6.7
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +2
Query: 377 VSSALVSPIRTP*ANARRATPSTLRSEQSERKCVKSLHATSLTLTQGGGEQVDFLTP--- 547
V++ L +P P NA ATP+ + Q+ LHAT G G++V P
Sbjct: 140 VTTHLSAPSTAP--NAASATPTATNAAQTTAITSCHLHATKTFCIAGDGKEVQVTGPAGP 197
Query: 548 --LPRTSRRACHGILPSARCLASESESVE 628
P T CH C+ +E VE
Sbjct: 198 NTTPPTQYTDCHRHGSKLYCVGPNNEEVE 226
>UniRef50_A7F286 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 280
Score = 33.1 bits (72), Expect = 6.7
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Frame = +2
Query: 386 ALVSPIRTP*ANARRATPSTLRS---EQSERKCVKSLHATS--LTLTQGGGEQVDFLTPL 550
ALV+ IR P R TP LRS E+SE+ LH LT G + + +
Sbjct: 181 ALVTAIRNP---GPRLTPDLLRSVSQEKSEKNAQTILHLCGHHWCLTPG---HLAVGSKV 234
Query: 551 PRTSRRACHGILPSARCLASESESVEE 631
+ ACHGIL SA+ L E +S+++
Sbjct: 235 LNDEQTACHGILQSAKSL-EEHDSIQK 260
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.1 bits (72), Expect = 6.7
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +1
Query: 268 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 426
F + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 82 FKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 8.9
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 278 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 403
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_A6R232 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1177
Score = 32.7 bits (71), Expect = 8.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 248 GRMCSATSTAWTSQPISSGGWLKNGRLSSKPT 343
G +C ATSTAW S+ + G W N SK T
Sbjct: 635 GNLCVATSTAWDSKAV-MGAWWANANQVSKTT 665
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 32.7 bits (71), Expect = 8.9
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 2 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
KK + V+ + K+WY V AP K+ +G + + E + GRV VSL +
Sbjct: 4 KKQSGGRKVEGWKAKNWYKVHAPEFLGKQFIGEIISSNP-------ENVPGRVLTVSLGE 56
Query: 182 LQADTDAERSFRKFRLI 232
L D + F+++
Sbjct: 57 LIQDYSKQNVRASFKIM 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,171,959
Number of Sequences: 1657284
Number of extensions: 15487704
Number of successful extensions: 48411
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48390
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -