Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30023
(770 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 73 5e-14
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 40 4e-04
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 38 0.002
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 37 0.003
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.020
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 34 0.026
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 32 0.10
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 31 0.18
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 29 0.56
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 29 0.74
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 29 0.97
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 1.7
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 27 3.9
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 26 6.9
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 26 6.9
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 6.9
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 72.9 bits (171), Expect = 5e-14
Identities = 34/73 (46%), Positives = 47/73 (64%)
Frame = +1
Query: 1 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGGA 180
+ SYP DT+RRRMMM SG A + Y ++ C I EG FFKGA +N+LRG GA
Sbjct: 248 VASYPLDTIRRRMMMTSGEA---VKYSSSFECGRQILAKEGARSFFKGAGANILRGVAGA 304
Query: 181 FVLVLYDEIKKVL 219
VL +YD+++ ++
Sbjct: 305 GVLSIYDQVQLLM 317
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 39.9 bits (89), Expect = 4e-04
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 13 PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLR-GTGGAFVL 189
P DTV+ RM QS A + YKN+IHC I +G F+ GA + R G V
Sbjct: 223 PIDTVKSRM--QSLSASKE--YKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVF 278
Query: 190 VLYDEIKKVL 219
+Y+++ ++L
Sbjct: 279 TVYEKVMEIL 288
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 4 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLR-GTGGA 180
+S PFD ++ R+ A Y T+A+ EG + +KG VLR G GG
Sbjct: 216 LSTPFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVPKVLRLGPGGG 275
Query: 181 FVLVLYDEI 207
+LV+++ +
Sbjct: 276 ILLVVFNSV 284
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 1 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKG 144
++ PFD V+ R+ QS + +Y N + C I+K EG + F+KG
Sbjct: 33 LVGQPFDCVKVRLQSQSNVSP---IYNNALDCVKKISKNEGLAAFYKG 77
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 34.3 bits (75), Expect = 0.020
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLR-GTGGA 180
I +P + +R R+ Q G + Y I C+ K EG +KG N+L+ A
Sbjct: 352 IVFPLNVIRTRLQTQ-GTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVA 410
Query: 181 FVLVLYDEIKKVL 219
++Y+ KK L
Sbjct: 411 ISYLVYENCKKWL 423
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 33.9 bits (74), Expect = 0.026
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 13 PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFF 138
PFD +++RM + S + YK+ +HC T+ + EG F+
Sbjct: 133 PFDVIKQRMQLPSRK------YKSALHCATTVFRNEGLGAFY 168
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 31.9 bits (69), Expect = 0.10
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +1
Query: 4 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLR 165
+++P D +RRR + YKN I KTEG + FF+G SN+L+
Sbjct: 243 LTFPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 31.1 bits (67), Expect = 0.18
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 13 PFDTVRRRMMMQSGR--AKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGGAFV 186
PF V+ RM S + YK+ + ++ I K G F GA + +LR G+ V
Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSV 207
Query: 187 -LVLYDEIKKVL 219
L +Y+ K+++
Sbjct: 208 QLPIYNWAKRMI 219
Score = 31.1 bits (67), Expect = 0.18
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 16 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLR 165
FDTV RM Q K+ LYKN I C ++EG +KG +++ R
Sbjct: 250 FDTVMTRMYNQ----KNKELYKNPIDCILKTIRSEGFFALYKGFGAHLAR 295
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 29.5 bits (63), Expect = 0.56
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 4 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLR 165
I+ PFD ++ R+ ++ +YKN +H + EG F G F VLR
Sbjct: 227 ITNPFDMLKTRVQLEPH------IYKNFLHSAKLVYANEGFRGFLDGFFLRVLR 274
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 29.1 bits (62), Expect = 0.74
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 51 WSCQERYPVQEHHPLLGYHCQDRGNLALLQGSLLQRPQRYWW 176
WS RY + HH ++ Y + G+ +Q S L+ P + W+
Sbjct: 908 WSQSSRYGWKGHHIMVQYWSELTGSSNYMQESDLEYPYKRWF 949
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 28.7 bits (61), Expect = 0.97
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +1
Query: 1 IISYPFDTVRRRMMMQ----SGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRG 168
++ P + ++ R+ +Q + +S+ Y + IAK EG FF G + +LR
Sbjct: 126 VVYVPSEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQIAKQEGMKTFFYGYRATILRD 185
Query: 169 TG-GAFVLVLYDEIKKV 216
F L+ Y+++++V
Sbjct: 186 IPFSGFQLLFYEKLRQV 202
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 76 YKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 219
Y NT + I K EG + F++G F ++ LY+ K L
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFL 277
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 26.6 bits (56), Expect = 3.9
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -2
Query: 85 CSCTGYRSWHDQTASSCAYGLC 20
CS + W D+ S C +G C
Sbjct: 627 CSVCNFERWKDRIISLCGHGFC 648
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 6.9
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 13 PFDTVRRRMMM--QSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGGAFV 186
P V+ R+ + +SG+A Y+++I C + EG +KG +++L
Sbjct: 182 PIWLVKTRLQLDKKSGQAAQ---YRSSIDCIIKTIRLEGFRGLYKGLSASLLGVGESTLQ 238
Query: 187 LVLYDEIK 210
VLY++ K
Sbjct: 239 WVLYEKFK 246
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 25.8 bits (54), Expect = 6.9
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 4 ISYPFDTVRRRMMMQSGRA-KSDILYKNTIHCWATIAKTEGTSPFFKG 144
+SYPF+ RR+M + R KS + K + T K G FF G
Sbjct: 253 VSYPFEVCRRKMQIGGIRKNKSFLRLKQVVQ---TTYKEAGMRGFFVG 297
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 194 KTSTKAPPVPLRTLEKAPL 138
K S+KAPPVPL + + P+
Sbjct: 1016 KLSSKAPPVPLPSADAPPI 1034
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,943,138
Number of Sequences: 5004
Number of extensions: 56179
Number of successful extensions: 144
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 371330890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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