Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30023
(770 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 90 2e-18
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 68 7e-12
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 65 5e-11
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 64 2e-10
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 42 4e-04
03_05_1041 - 29884975-29885107,29885485-29885552,29885652-298858... 41 0.001
03_02_0646 + 10141967-10142476,10143721-10144254 40 0.002
04_04_0048 + 22351788-22352177,22353175-22353711 38 0.012
01_07_0386 + 43218686-43218745,43218972-43219190,43219307-432193... 38 0.012
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 37 0.016
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 37 0.016
11_08_0097 + 28330565-28330645,28330768-28330986,28331066-283311... 36 0.047
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 36 0.047
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 34 0.14
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 33 0.19
09_04_0437 - 17587944-17588909 33 0.19
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 33 0.33
09_04_0628 + 19093665-19094033,19094408-19094722 32 0.44
08_02_1016 - 23606089-23607072 32 0.44
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902... 31 1.0
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 31 1.3
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 30 1.8
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 30 2.4
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 29 3.1
11_04_0086 + 13362788-13362937,13363887-13363970,13364233-133642... 28 7.2
07_03_0117 + 13589997-13590998 28 7.2
03_01_0644 - 4719954-4720022,4720445-4720912,4721009-4721312,472... 28 7.2
11_01_0445 - 3455449-3456096,3456348-3457958 28 9.5
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/73 (56%), Positives = 51/73 (69%)
Frame = +1
Query: 1 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGGA 180
+ISYP DTVRRRMMMQSG +Y +T+ CW I K EG F++GA SN+ R TG A
Sbjct: 266 LISYPLDTVRRRMMMQSGMDVQ--MYSSTLDCWRKIYKVEGIKSFYRGALSNMFRSTGAA 323
Query: 181 FVLVLYDEIKKVL 219
+LVLYDE+KK +
Sbjct: 324 AILVLYDEVKKFM 336
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 68.1 bits (159), Expect = 7e-12
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = +1
Query: 1 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGGA 180
+ SYP DTVRRRMMM SG A + YK+++ ++ I K EG FKGA +N+LR GA
Sbjct: 303 LASYPIDTVRRRMMMTSGEA---VKYKSSMDAFSQILKNEGAKSLFKGAGANILRAIAGA 359
Query: 181 FVLVLYDEIK 210
VL YD+++
Sbjct: 360 GVLSGYDQLQ 369
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 65.3 bits (152), Expect = 5e-11
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = +1
Query: 1 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGGA 180
+ SYP DTVRRRMMM SG A + Y +++ + I EG FKGA +N+LR GA
Sbjct: 301 LASYPIDTVRRRMMMTSGEA---VKYNSSLDAFKQIVAKEGAKSLFKGAGANILRAVAGA 357
Query: 181 FVLVLYDEIKKVL 219
VL YD+++ V+
Sbjct: 358 GVLAGYDKLQVVV 370
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/69 (44%), Positives = 42/69 (60%)
Frame = +1
Query: 7 SYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGGAFV 186
+YPFDT+RRRMM+ SG+ + YKN H I TEG F+G +N+L G GA V
Sbjct: 246 AYPFDTLRRRMMLTSGQP---LKYKNAFHAAKQIVSTEGFFTLFRGVGANILSGMAGAGV 302
Query: 187 LVLYDEIKK 213
L YD++ +
Sbjct: 303 LAGYDQLHR 311
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGGA 180
II+YP + VR ++ Q + Y I C + + EG F++G +N+LR T A
Sbjct: 235 IITYPHEVVRSKLQEQGRARHGAVHYTGVIDCIKQVYQKEGIPGFYRGCATNLLRTTPNA 294
Query: 181 FV-LVLYDEIKKVL 219
+ Y+ I +++
Sbjct: 295 VITFTSYEMINRLM 308
>03_05_1041 -
29884975-29885107,29885485-29885552,29885652-29885816,
29886262-29886372,29886999-29887072,29887387-29887480,
29887750-29887849,29888075-29888151,29888856-29888935,
29889025-29889157
Length = 344
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 10 YPFDTVRRRMMMQSGRAKSDIL-YKNTIHCWATIAKTEGTSPFFKGAFSNVLRGT 171
+P D VR R + GR D+ Y+NT H TIA++EG + G + VL T
Sbjct: 34 HPLDVVRTRFQVSGGRGCYDLPPYRNTAHAVYTIARSEGLRGLYAGFYPAVLGST 88
>03_02_0646 + 10141967-10142476,10143721-10144254
Length = 347
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLR-GTGG 177
I + PFD V+ R+M Q GR DI YK +H TI EG +KG ++R G
Sbjct: 266 ICTGPFDVVKTRLMAQ-GRT-GDIKYKGMVHAIRTIYTEEGLRALWKGLLPRLMRIPPGQ 323
Query: 178 AFVLVLYDEI 207
A + + D++
Sbjct: 324 AIMWAVADQV 333
Score = 35.5 bits (78), Expect = 0.047
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 25 VRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLR-GTGGA 180
V+ R+ Q G + + YK IHC TI EG + GA V+R GT A
Sbjct: 172 VKIRLQQQKGLSPDLLRYKGPIHCARTIVTEEGLFGLWAGALPTVMRNGTNQA 224
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 13 PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKG 144
P D ++ R+ + A Y+ HC T+ ++EG +KG
Sbjct: 59 PIDVIKTRLQLDRSGA-----YRGIAHCGTTVVRSEGVRALWKG 97
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 4 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGGAF 183
+S P D ++ RMM Q AK +LY+N+ C K EG + +KG R F
Sbjct: 233 LSCPADVIKTRMMNQGKDAK--VLYRNSYDCLVKTVKHEGLTALWKGFLPTWARLGPWQF 290
Query: 184 VL-VLYDEIKK 213
V V Y+++++
Sbjct: 291 VFWVSYEKLRQ 301
>01_07_0386 +
43218686-43218745,43218972-43219190,43219307-43219391,
43219583-43219713,43219802-43219900,43219984-43220088,
43220190-43220264,43222006-43222092,43222129-43222173
Length = 301
Score = 37.5 bits (83), Expect = 0.012
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 4 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLR 165
I P D V+ RMM D YK+T+ C+A K +G F+KG +N R
Sbjct: 227 IGSPVDVVKSRMM-------GDATYKSTLDCFAKTLKNDGLPAFYKGFIANFCR 273
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Frame = +1
Query: 4 ISYPFDTVRRRMMM---------QSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSN 156
++YP D +RRRM M +G K + Y I + + EG +KG N
Sbjct: 266 VAYPLDVIRRRMQMVGWNNAASIVTGEGKEALQYNGMIDAFRKTVRYEGVGALYKGLVPN 325
Query: 157 VLRGTGG-AFVLVLYDEIKKVL 219
++ A V Y+ ++KVL
Sbjct: 326 SVKVVPSIAIAFVTYEFVQKVL 347
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 37.1 bits (82), Expect = 0.016
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 4 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLR-GTGGA 180
++YP D VR R+ Q K+ YK H +TI + EG +KG + +L G A
Sbjct: 129 VTYPLDVVRTRLATQ----KTTRYYKGIFHAVSTICRDEGVKGLYKGLGATLLGVGPSIA 184
Query: 181 FVLVLYDEIK 210
+Y+ ++
Sbjct: 185 ISFTVYESLR 194
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 7 SYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKG---AFSNVLRGTGG 177
++P D V+RRM +Q S + + I + EG F++G + V+ G
Sbjct: 225 TFPLDLVKRRMQLQGAAGTSSVCKSSITGTIRQIFQKEGLRGFYRGIVPEYLKVVPSVGI 284
Query: 178 AFVLVLYDEIKKVL 219
AF + Y+ +K +L
Sbjct: 285 AF--MTYETLKSLL 296
>11_08_0097 +
28330565-28330645,28330768-28330986,28331066-28331144,
28331222-28331355,28331447-28331545,28331638-28331742,
28332377-28332451,28333671-28333757,28333854-28333889
Length = 304
Score = 35.5 bits (78), Expect = 0.047
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 4 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLR-GTGGA 180
+ P D V+ RMM D Y +TI C+ K +G F+KG N R G+
Sbjct: 233 VGSPVDVVKSRMM-------GDSAYTSTIDCFVKTLKNDGPLAFYKGFLPNFARLGSWNV 285
Query: 181 FVLVLYDEIKKV 216
+ + ++++K+
Sbjct: 286 IMFLTLEQVQKL 297
Score = 31.5 bits (68), Expect = 0.77
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 1 IISYPFDTVRRRMMMQSG-RAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRG-TG 174
+ + P DT + R+ +Q A + Y+ + ATIA+ EG + +KG + R
Sbjct: 28 VCTIPLDTAKVRLQLQKNVAADAAPKYRGLLGTAATIAREEGAAALWKGIVPGLHRQCIY 87
Query: 175 GAFVLVLYDEIKKV 216
G + LY+ ++ V
Sbjct: 88 GGLRIGLYEPVRTV 101
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 35.5 bits (78), Expect = 0.047
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 4 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLR 165
I+YP D VRR+M +Q+ + + K T A IAK +G F G N L+
Sbjct: 259 ITYPLDVVRRQMQVQAFSSSNLEKGKGTFGSIAMIAKHQGWRQLFSGLSINYLK 312
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGG-A 180
I++P D VRRRM ++ ++ + + I +TE ++G +
Sbjct: 254 ITFPLDLVRRRMQLEGAAGRARVYQTGLFGTFGHIVRTESLRGLYRGILPEYCKVVPSVG 313
Query: 181 FVLVLYDEIKKVL 219
V + Y+ +K +L
Sbjct: 314 IVFMTYETLKSIL 326
>12_02_0618 -
21262021-21262117,21262429-21262466,21262933-21262986,
21263274-21263438,21263523-21263759,21263857-21263918,
21264543-21264656,21264816-21264942,21266200-21266218,
21266338-21266428,21266932-21267094,21267182-21267330,
21268147-21268287,21268368-21268533,21268568-21268631,
21268729-21269084,21269759-21269977,21270328-21270433,
21270713-21270942
Length = 865
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 73 LYKNTIHCWATIAKTEGTSPFFKGAFSNVLR-GTGGAFVLVLYDEIKKV 216
+Y+N HC + TEG + +KG F+ R G A V+ ++++++
Sbjct: 811 VYRNGFHCGYQVVVTEGVTSLYKGGFATFARLGPQTAITFVVCEKLREL 859
>09_04_0437 - 17587944-17588909
Length = 321
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1
Query: 7 SYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGGAFV 186
S P D V+ R+M A + Y + C ++EG +KG V R G F
Sbjct: 245 STPVDVVKTRVMNMKVVAGAPPPYSGALDCLIKTVRSEGAMALYKGFVPTVTR--QGPFT 302
Query: 187 LVLYDEIKKV 216
+VL+ +++V
Sbjct: 303 IVLFVTLEQV 312
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 7 SYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGGAFV 186
++P + R++M Q G +YKN H I + EG +KG + ++ A +
Sbjct: 342 TFPLEVARKQM--QVGAVGGRQVYKNVFHALYCIMENEGIGGLYKGLGPSCIKLMPAAGI 399
Query: 187 -LVLYDEIKKVL 219
+ Y+ KK+L
Sbjct: 400 SFMCYEACKKIL 411
Score = 32.3 bits (70), Expect = 0.44
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 13 PFDTVRRRMMMQS-GRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLR-GTGGAFV 186
P +T+R +M+ S G + +++ + +I KTEG + F+G F NV+R A
Sbjct: 156 PLETIRTHLMVGSNGDSMTEV--------FQSIMKTEGWTGLFRGNFVNVIRVAPSKAIE 207
Query: 187 LVLYDEIKKVL 219
L +D KK L
Sbjct: 208 LFAFDTAKKFL 218
>09_04_0628 + 19093665-19094033,19094408-19094722
Length = 227
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 87 GVLVQDIALGTTRLHHHAPTDCVEGIGDD 1
G V+ +ALG LHHHAP D ++ G D
Sbjct: 8 GGAVEGLALGIAPLHHHAPCDDLKDDGGD 36
>08_02_1016 - 23606089-23607072
Length = 327
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +1
Query: 7 SYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGGAFV 186
S P D V+ R+M + Y I C ++EG +KG V R G F
Sbjct: 251 SNPVDVVKTRVMNMKVAPGAPPPYSGAIDCALKTVRSEGVMALYKGFIPTVSR--QGPFT 308
Query: 187 LVLYDEIKKV 216
+VL+ +++V
Sbjct: 309 VVLFVTLEQV 318
>01_01_1139 -
9024609-9024708,9024832-9024910,9025083-9025252,
9025339-9025451,9025518-9025586,9025867-9025944,
9026022-9026084,9026590-9026670,9027166-9027222,
9027352-9027705
Length = 387
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTGGA 180
++ YP DTVRR+M M+ Y + I + +G ++G N L+ +
Sbjct: 301 LMCYPLDTVRRQMQMKGSP------YNTVLDAIPGIVERDGLIGLYRGFVPNALKNLPNS 354
Query: 181 FV-LVLYDEIKKVL 219
+ L +D +K ++
Sbjct: 355 SIKLTAFDTVKTLI 368
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +1
Query: 4 ISYPFDTVRRRMMMQSGR---AKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTG 174
++YP D VRR+M +Q+ + A + T A I + +G F G N ++
Sbjct: 250 LTYPLDVVRRQMQVQNKQPHNANDAFRIRGTFQGLALIIRCQGWRQLFAGLSLNYVKVVP 309
Query: 175 G-AFVLVLYDEIKKVL 219
A YD +K +L
Sbjct: 310 SVAIGFTTYDMMKNLL 325
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +1
Query: 4 ISYPFDTVRRRMMMQSGRAKSDI---LYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTG 174
++YP D VRR+M +QS + + T I +T+G F G N ++
Sbjct: 247 LTYPLDVVRRQMQVQSQQYHDKFGGPQIRGTFQGLMIIKQTQGWRQLFAGLSLNYIKVVP 306
Query: 175 G-AFVLVLYDEIKKVL 219
A YD +K +L
Sbjct: 307 SVAIGFTAYDTMKSLL 322
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Frame = +1
Query: 10 YPFDTVRRRMMMQS-------GRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRG 168
+P D V++R ++ G YK H I EG +KG F ++++
Sbjct: 259 HPLDVVKKRFQIEGLKRHPRYGARIESSTYKGMYHALKEIVAKEGFGGLYKGLFPSLVKS 318
Query: 169 T-GGAFVLVLYDEI 207
GA V Y+ I
Sbjct: 319 APAGAVTFVAYEYI 332
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 13 PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLR-GTGGAFVL 189
P +T+R +M+ S +T + +I K EG + F+G F NV+R A L
Sbjct: 154 PLETIRTHLMVGSNG-------NSTAEVFQSIMKHEGWTGLFRGNFVNVIRVAPSKAIEL 206
Query: 190 VLYDEIKKVL 219
+D K L
Sbjct: 207 FAFDTANKFL 216
>11_04_0086 +
13362788-13362937,13363887-13363970,13364233-13364294,
13365146-13365507,13365928-13366142,13366236-13366292
Length = 309
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Frame = +1
Query: 4 ISYPFDTVRRRMMMQSGR-AKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVLRGTG-G 177
+ P D RM S A YKN H IA EG +KGA V+R
Sbjct: 133 VGSPADLALIRMQADSTLPAAQSRNYKNAFHALYRIAADEGVLALWKGAGPTVVRAMSLN 192
Query: 178 AFVLVLYDE 204
+L YD+
Sbjct: 193 MGMLASYDQ 201
>07_03_0117 + 13589997-13590998
Length = 333
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 7 SYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKG-AFSNVLRGTGGAF 183
+YP D VRR++ + G T+ + I + +G + G + V + A
Sbjct: 256 TYPLDVVRRQIQLGGGGG-------GTLQAFRAIVRAQGARQLYAGLGITYVKKVPSTAV 308
Query: 184 VLVLYDEIKKVL 219
LV YD +K +L
Sbjct: 309 GLVAYDYMKSLL 320
>03_01_0644 -
4719954-4720022,4720445-4720912,4721009-4721312,
4722321-4722745
Length = 421
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 1 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSPFFKGAFSNVL-RGTGG 177
I+ P DT+R RM+ G A + I + +TEG +KG +++ G
Sbjct: 236 ILCIPMDTIRTRMVAPGGEALGGV-----IGVARHMIQTEGFFSLYKGLVPSLISMAPSG 290
Query: 178 AFVLVLYDEIK 210
A +YD +K
Sbjct: 291 AVFYGVYDILK 301
>11_01_0445 - 3455449-3456096,3456348-3457958
Length = 752
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 695 GSEFDIIM*WIFDFCTHY 748
G FDIIM W+F FC +
Sbjct: 390 GCNFDIIMTWVFMFCVMF 407
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,332,616
Number of Sequences: 37544
Number of extensions: 330927
Number of successful extensions: 654
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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