Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30015
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 158 2e-38
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 158 2e-38
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 158 2e-38
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 158 2e-38
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 158 2e-38
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 158 2e-38
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 158 2e-38
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 158 2e-38
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 158 2e-38
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 158 2e-38
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 158 2e-38
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 150 5e-36
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 71 3e-12
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 70 8e-12
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 41 0.003
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 158 bits (383), Expect = 2e-38
Identities = 79/160 (49%), Positives = 99/160 (61%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVEA*SHTKQSVARMLLGGYVHMMGALLPLITXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TV K + L G P
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXXXXXXXXXXCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 494
++GRL+HE+GWKY+ V LE+KRK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 254 RGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRK 403
RGM+PHKT+RG+ AL RL+ +DG PPP+D LKP RK
Sbjct: 85 RGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 134
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 2e-38
Identities = 79/160 (49%), Positives = 99/160 (61%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVEA*SHTKQSVARMLLGGYVHMMGALLPLITXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TV K + L G P
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXXXXXXXXXXCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 494
++GRL+HE+GWKY+ V LE+KRK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 254 RGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRK 403
RGM+PHKT+RG+ AL RL+ +DG PPP+D LKP RK
Sbjct: 85 RGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 134
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 2e-38
Identities = 79/160 (49%), Positives = 99/160 (61%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVEA*SHTKQSVARMLLGGYVHMMGALLPLITXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TV K + L G P
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXXXXXXXXXXCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 494
++GRL+HE+GWKY+ V LE+KRK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 254 RGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRK 403
RGM+PHKT+RG+ AL RL+ +DG PPP+D LKP RK
Sbjct: 85 RGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 134
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 2e-38
Identities = 79/160 (49%), Positives = 99/160 (61%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVEA*SHTKQSVARMLLGGYVHMMGALLPLITXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TV K + L G P
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXXXXXXXXXXCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 494
++GRL+HE+GWKY+ V LE+KRK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 254 RGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRK 403
RGM+PHKT+RG+ AL RL+ +DG PPP+D LKP RK
Sbjct: 85 RGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 134
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 2e-38
Identities = 79/160 (49%), Positives = 99/160 (61%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVEA*SHTKQSVARMLLGGYVHMMGALLPLITXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TV K + L G P
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXXXXXXXXXXCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 494
++GRL+HE+GWKY+ V LE+KRK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 254 RGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRK 403
RGM+PHKT+RG+ AL RL+ +DG PPP+D LKP RK
Sbjct: 85 RGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 134
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 158 bits (383), Expect = 2e-38
Identities = 79/160 (49%), Positives = 99/160 (61%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 62
Query: 195 NPARGPFHFRAPSKILWKTVEA*SHTKQSVARMLLGGYVHMMGALLPLITXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TV K + L G P
Sbjct: 63 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 122
Query: 375 XXXXXXXXXXXCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 494
++GRL+HE+GWKY+ V LE+KRK KA
Sbjct: 123 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 162
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 254 RGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRK 403
RGM+PHKT+RG+ AL RL+ +DG PPP+D LKP RK
Sbjct: 83 RGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 132
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 2e-38
Identities = 79/160 (49%), Positives = 99/160 (61%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVEA*SHTKQSVARMLLGGYVHMMGALLPLITXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TV K + L G P
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXXXXXXXXXXCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 494
++GRL+HE+GWKY+ V LE+KRK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 254 RGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRK 403
RGM+PHKT+RG+ AL RL+ +DG PPP+D LKP RK
Sbjct: 85 RGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 134
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 2e-38
Identities = 79/160 (49%), Positives = 99/160 (61%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVEA*SHTKQSVARMLLGGYVHMMGALLPLITXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TV K + L G P
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXXXXXXXXXXCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 494
++GRL+HE+GWKY+ V LE+KRK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 254 RGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRK 403
RGM+PHKT+RG+ AL RL+ +DG PPP+D LKP RK
Sbjct: 85 RGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 134
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 2e-38
Identities = 79/160 (49%), Positives = 99/160 (61%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVEA*SHTKQSVARMLLGGYVHMMGALLPLITXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TV K + L G P
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXXXXXXXXXXCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 494
++GRL+HE+GWKY+ V LE+KRK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 254 RGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRK 403
RGM+PHKT+RG+ AL RL+ +DG PPP+D LKP RK
Sbjct: 85 RGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 134
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 158 bits (383), Expect = 2e-38
Identities = 79/160 (49%), Positives = 99/160 (61%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVEA*SHTKQSVARMLLGGYVHMMGALLPLITXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TV K + L G P
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXXXXXXXXXXCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 494
++GRL+HE+GWKY+ V LE+KRK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +2
Query: 254 RGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRK 403
RGM+PHKT+RG+ AL L+ +DG PPP+D LKP RK
Sbjct: 85 RGMLPHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 134
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 2e-38
Identities = 79/160 (49%), Positives = 99/160 (61%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVEA*SHTKQSVARMLLGGYVHMMGALLPLITXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TV K + L G P
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXXXXXXXXXXCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 494
++GRL+HE+GWKY+ V LE+KRK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 254 RGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRK 403
RGM+PHKT+RG+ AL RL+ +DG PPP+D LKP RK
Sbjct: 85 RGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 134
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 150 bits (363), Expect = 5e-36
Identities = 75/160 (46%), Positives = 97/160 (60%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVV CE INISGNF+RNKL ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVEA*SHTKQSVARMLLGGYVHMMGALLPLITXXXXXXXXXX 374
+P+RGP+HFRAPS++ W+TV K + L G P
Sbjct: 65 SPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXXXXXXXXXXCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 494
++GRL+HE+GWKY+ V LE+KRK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
Score = 51.6 bits (118), Expect = 2e-06
Identities = 24/50 (48%), Positives = 29/50 (58%)
Frame = +2
Query: 254 RGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRK 403
RGM+PHKT+RG+ AL RL+ DG PPP+D LKP RK
Sbjct: 85 RGMLPHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAALKVVRLKPTRK 134
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 71.3 bits (167), Expect = 3e-12
Identities = 38/102 (37%), Positives = 48/102 (47%)
Frame = +3
Query: 189 NVNPARGPFHFRAPSKILWKTVEA*SHTKQSVARMLLGGYVHMMGALLPLITXXXXXXXX 368
N NP+RGP+HFRAPS+I W+TV K + L G P
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 369 XXXXXXXXXXXXXCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 494
++GRL+HE+GWKY+ V LEDKRK KA
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEKA 103
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 254 RGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRK 403
RGM+PHKT+RG+ AL RL+ +DG PPP+D LKP RK
Sbjct: 24 RGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 73
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 69.7 bits (163), Expect = 8e-12
Identities = 37/102 (36%), Positives = 48/102 (47%)
Frame = +3
Query: 189 NVNPARGPFHFRAPSKILWKTVEA*SHTKQSVARMLLGGYVHMMGALLPLITXXXXXXXX 368
N NP+RGP+HFRAPS+I W+TV K + L G P
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 369 XXXXXXXXXXXXXCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 494
++GRL+HE+GWKY+ V LE+KRK KA
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 103
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 254 RGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRK 403
RGM+PHKT+RG+ AL RL+ +DG PPP+D LKP RK
Sbjct: 24 RGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 73
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 41.1 bits (92), Expect = 0.003
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 260 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRKL-LSCRQTVP*N 436
M+ HKT+RG +L L+ +DG PPP+D LKP RK L RQ
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 437 W 439
W
Sbjct: 61 W 61
Score = 33.9 bits (74), Expect = 0.52
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 414 VGRLSHEIGWKYRDVVRKLEDKRKGKA 494
+GR + E+ WKY+ V LE+KRK KA
Sbjct: 52 LGRQAQEVRWKYQAVTATLEEKRKEKA 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,174,673
Number of Sequences: 237096
Number of extensions: 2237339
Number of successful extensions: 8210
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8210
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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