Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30014
(611 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 133 1e-31
At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1 (HS... 131 3e-31
At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3 (HS... 131 4e-31
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 128 2e-30
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 124 5e-29
At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein, puta... 109 1e-24
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 107 4e-24
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 105 2e-23
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 99 2e-21
At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)... 97 8e-21
At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p... 97 1e-20
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 93 1e-19
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)... 91 7e-19
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 84 6e-17
At2g32120.2 68415.m03926 heat shock protein 70 family protein / ... 70 1e-12
At2g32120.1 68415.m03925 heat shock protein 70 family protein / ... 70 1e-12
At5g09400.1 68418.m01089 potassium transporter family protein si... 32 0.34
At5g55670.1 68418.m06941 RNA recognition motif (RRM)-containing ... 31 0.60
At1g33770.1 68414.m04174 protein kinase family protein contains ... 29 2.4
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 29 2.4
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 29 3.2
At3g15560.1 68416.m01972 expressed protein 28 4.2
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL... 28 4.2
At2g12900.1 68415.m01408 hypothetical protein similar to transcr... 28 4.2
At3g55150.1 68416.m06125 exocyst subunit EXO70 family protein co... 27 7.4
At2g43970.2 68415.m05468 La domain-containing protein contains P... 27 7.4
At2g43970.1 68415.m05467 La domain-containing protein contains P... 27 7.4
At5g62310.1 68418.m07822 incomplete root hair elongation (IRE) /... 27 9.8
At4g31800.1 68417.m04517 WRKY family transcription factor 27 9.8
At1g73010.1 68414.m08443 expressed protein similar to phosphatas... 27 9.8
At1g55600.1 68414.m06364 WRKY family transcription factor simila... 27 9.8
At1g01350.1 68414.m00050 zinc finger (CCCH-type/C3HC4-type RING ... 27 9.8
>At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2
(HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock
cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis
thaliana}
Length = 653
Score = 133 bits (321), Expect = 1e-31
Identities = 71/142 (50%), Positives = 93/142 (65%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
YSDNQPGVLIQVFEGERA TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA
Sbjct: 437 YSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSA 496
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA* 406
+K+T K+N+ + K ++ + ++ K+ ++ + + +
Sbjct: 497 EDKTTGKKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNM- 555
Query: 407 SATMEDEKLKEKILLNSDKQTI 472
T+ DEK+ EK L +DK+ +
Sbjct: 556 RNTIRDEKIGEK-LPAADKKKV 576
>At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1
(HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}
Length = 651
Score = 131 bits (317), Expect = 3e-31
Identities = 70/142 (49%), Positives = 93/142 (65%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
YSDNQPGVLIQV+EGERA TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA
Sbjct: 437 YSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSA 496
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA* 406
+K+T ++N+ + K + + ++ K+ ++ + + +
Sbjct: 497 EDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNM- 555
Query: 407 SATMEDEKLKEKILLNSDKQTI 472
T++DEK+ EK L +DK+ I
Sbjct: 556 RNTIQDEKIGEK-LPAADKKKI 576
>At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3
(HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock
cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis
thaliana}
Length = 649
Score = 131 bits (316), Expect = 4e-31
Identities = 70/142 (49%), Positives = 90/142 (63%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
YSDNQPGVLIQV+EGERA TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA
Sbjct: 437 YSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSA 496
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA* 406
+K+T ++N+ + K + + ++ K+ + + + +
Sbjct: 497 EDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVDAKNALENYAYNM- 555
Query: 407 SATMEDEKLKEKILLNSDKQTI 472
T+ DEK+ EK L DK+ I
Sbjct: 556 RNTIRDEKIGEK-LAGDDKKKI 576
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 128 bits (310), Expect = 2e-30
Identities = 69/142 (48%), Positives = 91/142 (64%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
YSDNQPGVLIQV+EGERA TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA
Sbjct: 437 YSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSA 496
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA* 406
+K+T ++N+ + K ++ + + K+ + + + +
Sbjct: 497 EDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNM- 555
Query: 407 SATMEDEKLKEKILLNSDKQTI 472
T++DEK+ K L +DK+ I
Sbjct: 556 RNTIKDEKIASK-LDAADKKKI 576
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 124 bits (299), Expect = 5e-29
Identities = 67/144 (46%), Positives = 90/144 (62%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
Y+DNQPGVLIQV+EGERA T+DNNLLG FEL GIPPAPRGVPQI V FDIDANGILNVSA
Sbjct: 436 YADNQPGVLIQVYEGERARTRDNNLLGTFELKGIPPAPRGVPQINVCFDIDANGILNVSA 495
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA* 406
+K+ +N+ + K ++ + + + K+ ++ + + +
Sbjct: 496 EDKTAGVKNQITITNDKGRLSKEEIEKMVQDAEKYKAEDEQVKKKVEAKNSLENYAYNM- 554
Query: 407 SATMEDEKLKEKILLNSDKQTIPR 478
T++DEKL +K L DKQ I +
Sbjct: 555 RNTIKDEKLAQK-LTQEDKQKIEK 577
>At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein,
putative / HSC70, putative / HSP70, putative strong
similarity to heat shock cognate 70 kd protein 1
SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]
Length = 617
Score = 109 bits (263), Expect = 1e-24
Identities = 50/75 (66%), Positives = 61/75 (81%)
Frame = +2
Query: 53 DNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIE 232
DNQP VLIQV+EGERA T DNN+LG+F L+GIPPAPRG+PQ V FDID+NGILNVSA +
Sbjct: 439 DNQPDVLIQVYEGERARTIDNNILGQFVLSGIPPAPRGIPQFTVCFDIDSNGILNVSAED 498
Query: 233 KSTNKENRSPLPTTK 277
K+T K+N+ + K
Sbjct: 499 KATGKKNKITITNDK 513
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/34 (70%), Positives = 32/34 (94%)
Frame = +1
Query: 253 QITITNDKGRLSKEEIERMVNEAEKYRNEDDKAK 354
+ITITNDKGRLSK++IE+MV EAEKY++ED++ K
Sbjct: 506 KITITNDKGRLSKDDIEKMVQEAEKYKSEDEEHK 539
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 107 bits (258), Expect = 4e-24
Identities = 54/133 (40%), Positives = 78/133 (58%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
Y D Q V IQVFEGER++TKD LLGKF+LTG+PPAPRG PQIEVTF++DANGILNV A
Sbjct: 462 YQDQQTTVSIQVFEGERSLTKDCRLLGKFDLTGVPPAPRGTPQIEVTFEVDANGILNVKA 521
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA* 406
+K++ K + + K ++ + + KE I + + + +
Sbjct: 522 EDKASGKSEKITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMK 581
Query: 407 SATMEDEKLKEKI 445
+ + +KL +K+
Sbjct: 582 NQVSDKDKLADKL 594
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 105 bits (253), Expect = 2e-23
Identities = 54/133 (40%), Positives = 77/133 (57%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
Y D Q V IQVFEGER++TKD LLGKF+L GIPPAPRG PQIEVTF++DANGILNV A
Sbjct: 462 YQDQQTTVSIQVFEGERSLTKDCRLLGKFDLNGIPPAPRGTPQIEVTFEVDANGILNVKA 521
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA* 406
+K++ K + + K ++ + + KE I + + + +
Sbjct: 522 EDKASGKSEKITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMK 581
Query: 407 SATMEDEKLKEKI 445
+ + +KL +K+
Sbjct: 582 NQVNDKDKLADKL 594
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 99.1 bits (236), Expect = 2e-21
Identities = 57/140 (40%), Positives = 74/140 (52%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
Y D Q V I V+EGER+MTKDN LGKF+LTGI PAPRGVPQIEVTF++DANGIL V A
Sbjct: 476 YQDQQTTVTINVYEGERSMTKDNRELGKFDLTGILPAPRGVPQIEVTFEVDANGILQVKA 535
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA* 406
+K + K + + KE I + + + +
Sbjct: 536 EDKVAKTSQSITITNDKGRLTEEEIEEMIREAEEFAEEDKIMKEKIDARNKLETYVYNMK 595
Query: 407 SATMEDEKLKEKILLNSDKQ 466
S + EKL +KI + DK+
Sbjct: 596 STVADKEKLAKKI-SDEDKE 614
>At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746590
Length = 682
Score = 97.1 bits (231), Expect = 8e-21
Identities = 45/66 (68%), Positives = 54/66 (81%)
Frame = +2
Query: 50 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 229
+DNQ V I+V +GER M DN LLG+F+L GIPP+PRGVPQIEVTFDIDANGI+ VSA
Sbjct: 479 ADNQTQVGIRVLQGEREMATDNKLLGEFDLVGIPPSPRGVPQIEVTFDIDANGIVTVSAK 538
Query: 230 EKSTNK 247
+K+T K
Sbjct: 539 DKTTGK 544
>At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial,
putative / HSP70, mitochondrial, putative strong
similarity to SP|Q01899 Heat shock 70 kDa protein,
mitochondrial precursor {Phaseolus vulgaris}
Length = 682
Score = 96.7 bits (230), Expect = 1e-20
Identities = 45/67 (67%), Positives = 54/67 (80%)
Frame = +2
Query: 50 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 229
+DNQ V I+V +GER M DN +LG+F+L GIPPAPRG+PQIEVTFDIDANGI VSA
Sbjct: 474 ADNQMQVGIKVLQGEREMAADNKVLGEFDLVGIPPAPRGMPQIEVTFDIDANGITTVSAK 533
Query: 230 EKSTNKE 250
+K+T KE
Sbjct: 534 DKATGKE 540
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 250 EQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAK 354
+ ITI + G LS +EI RMV EAE +D + K
Sbjct: 541 QNITIRSSGG-LSDDEINRMVKEAELNAQKDQEKK 574
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 93.5 bits (222), Expect = 1e-19
Identities = 43/67 (64%), Positives = 50/67 (74%)
Frame = +2
Query: 50 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 229
+D Q V I V +GER +DN LG F L GIPPAPRGVPQIEV FDIDANGIL+VSA+
Sbjct: 501 ADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAV 560
Query: 230 EKSTNKE 250
+K T K+
Sbjct: 561 DKGTGKK 567
Score = 32.3 bits (70), Expect = 0.26
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +1
Query: 250 EQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAKGD 360
+ ITIT L K+E+++MV EAE++ +DDK K D
Sbjct: 568 QDITITG-ASTLPKDEVDQMVQEAERFA-KDDKEKRD 602
>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746592
Length = 718
Score = 90.6 bits (215), Expect = 7e-19
Identities = 42/67 (62%), Positives = 49/67 (73%)
Frame = +2
Query: 50 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 229
+D Q V I V +GER +DN +G F L GIPPAPRGVPQIEV FDIDANGIL+VSA
Sbjct: 501 ADGQTSVEINVLQGEREFVRDNKSIGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAS 560
Query: 230 EKSTNKE 250
+K T K+
Sbjct: 561 DKGTGKK 567
Score = 30.7 bits (66), Expect = 0.80
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +1
Query: 250 EQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAKGD 360
+ ITIT L K+E++ MV EAE++ E DK K D
Sbjct: 568 QDITITG-ASTLPKDEVDTMVQEAERFAKE-DKEKRD 602
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 84.2 bits (199), Expect = 6e-17
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFD-IDANGILNVS 223
Y D Q V IQVFEGER++TKD LLGKF+LTG+PPAPRG PQIEVTF+ IDA L
Sbjct: 462 YQDQQTTVSIQVFEGERSLTKDCRLLGKFDLTGVPPAPRGTPQIEVTFEKIDARNALETY 521
Query: 224 AIEKSTNKENRSPL-------PTTKVVSPRKRSSVWLMRQRSTE 334
++ L K+ + K + WL +++E
Sbjct: 522 VYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSE 565
>At2g32120.2 68415.m03926 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 69.7 bits (163), Expect = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = +2
Query: 53 DNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
DNQ LI ++EGE ++N+LLG F+L GIPPAP+GVP+I V DIDA+ L V A
Sbjct: 456 DNQKEALIIIYEGEGETVEENHLLGYFKLVGIPPAPKGVPEINVCMDIDASNALRVFA 513
>At2g32120.1 68415.m03925 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 69.7 bits (163), Expect = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = +2
Query: 53 DNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
DNQ LI ++EGE ++N+LLG F+L GIPPAP+GVP+I V DIDA+ L V A
Sbjct: 456 DNQKEALIIIYEGEGETVEENHLLGYFKLVGIPPAPKGVPEINVCMDIDASNALRVFA 513
>At5g09400.1 68418.m01089 potassium transporter family protein
similar to K+ transporter HAK5 [Arabidopsis thaliana]
GI:7108597; contains Pfam profile PF02705: K+ potassium
transporter; KUP/HAK/KT Transporter family member,
PMID:11500563; Note: possible sequencing error causes a
frameshift in the 4th exon|15810448|gb|AY056263
Length = 858
Score = 31.9 bits (69), Expect = 0.34
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = +1
Query: 184 HLRHRCQRYPQRFRYREVHQQGEQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAKGDH 363
HL RY + +E HQ EQ+ I + + + +E ER + E N+D ++ D
Sbjct: 669 HLFRCIARYGYKDARKETHQAFEQLLIESLEKFIRREAQERSL---ESDGNDDSDSEEDF 725
Query: 364 PGPRMHWNLTGFSMKCYHGG*EAQGKD-SPEL*QADHSSNKCNIHPF 501
PG R+ G SM ++ +D + + + + SS+ N HPF
Sbjct: 726 PGSRVVIGPNG-SMYSMGVPLLSEYRDLNKPIMEMNTSSDHTNHHPF 771
>At5g55670.1 68418.m06941 RNA recognition motif (RRM)-containing
protein
Length = 710
Score = 31.1 bits (67), Expect = 0.60
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +1
Query: 190 RHRCQRYPQRFRYREVHQQGEQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAKGDHPG 369
RHR R R R RE H + + + + + R + E +R E E+Y + D P
Sbjct: 608 RHRDDRDTGREREREHHHKDRERSREHVRDRERERERDRHREERERYGGDHRTRHRDEPE 667
Query: 370 PRMHWN 387
WN
Sbjct: 668 HDEEWN 673
>At1g33770.1 68414.m04174 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 614
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +2
Query: 161 RGVPQIEVTFDIDANGILNVSAIEKSTNKENRSPLPTTKVVSPRKRSSV 307
RG+ +VT + A+G NVS S KE R T V+ P RS+V
Sbjct: 473 RGLRDSKVTPEFIASGNSNVSLTTPSFKKEKRF-TDTNSVIHPSSRSNV 520
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 229 REVHQQGEQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAK 354
++VH+ E I+ ++ + +EE ++ E +K + ED+K K
Sbjct: 169 KKVHKHAEIISSKTEEEKKKEEEDKKKKEEEDKKKKEDEKKK 210
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +1
Query: 202 QRYPQRFRYREVHQQGEQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAK 354
+R +R R E+ ++ EQ ++ R +EE+ER + E ++ + E++ AK
Sbjct: 564 KREEERKREEEMAKRREQ-----ERQRKEREEVERKIREEQERKREEEMAK 609
>At3g15560.1 68416.m01972 expressed protein
Length = 471
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 187 LRHRCQRYPQRFRYREVHQQGEQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAK 354
LRHR + R +++ + +T N++ RL+ +E+E NE K R +K +
Sbjct: 29 LRHREEAQNMRAEMKKLDDETNDLTRKNNEDRLTIQELE---NELVKRRRRAEKCR 81
>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
(PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
(EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
{Arabidopsis thaliana}; contains Pfam profiles: PF00614
phospholipase D.active site motif, PF00168 C2 domain
Length = 1083
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 153 GGIPVSSNLPSKLLSLVIARSPSNTWMSTPG 61
GG+ +S+N P + ++ PSN+W S PG
Sbjct: 187 GGLHISTNQPGPSVPQ-LSSLPSNSWQSRPG 216
>At2g12900.1 68415.m01408 hypothetical protein similar to
transcription factor(bZIP family) VSF-1 GI:3425907 from
[Lycopersicon esculentum]
Length = 264
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 256 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKAKGDHPGPRM 378
ITI+N+KG + + ++ E +YR E D++ P M
Sbjct: 210 ITISNEKGSVELQRLKMETCEVLQYRREFDRSNMQGMDPNM 250
>At3g55150.1 68416.m06125 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit; tomato leucine zipper-containing protein,
Lycopersicon esculentum, PIR:S21495
Length = 636
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 157 RRWDPGQLEFTEQVVIFGHS 98
R+WDP FT+ V +F HS
Sbjct: 54 RKWDPNTPSFTKIVSLFNHS 73
>At2g43970.2 68415.m05468 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 529
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +1
Query: 232 EVHQQGEQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAKGDH 363
+V + G ++I + G L ++ I+++VN+ E Y ++ + A DH
Sbjct: 173 QVTETGASVSIDSKTG-LPEDSIQKIVNQVEYYFSDLNLATTDH 215
>At2g43970.1 68415.m05467 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 545
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +1
Query: 232 EVHQQGEQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAKGDH 363
+V + G ++I + G L ++ I+++VN+ E Y ++ + A DH
Sbjct: 173 QVTETGASVSIDSKTG-LPEDSIQKIVNQVEYYFSDLNLATTDH 215
>At5g62310.1 68418.m07822 incomplete root hair elongation (IRE) /
protein kinase, putative nearly identical to IRE
(incomplete root hair elongation) [Arabidopsis thaliana]
gi|6729346|dbj|BAA89783
Length = 1168
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +2
Query: 167 VPQIEVTFDIDANGILNVSAIEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMT 346
VP+ + TF +D ILN ++ T + L +PR L+ R T + +
Sbjct: 579 VPRSQNTFSLDELNILNEMSMTNGTKDSSAGSLTPPSPATPRNSQVDLLLSGRKTISELE 638
Query: 347 RQKE 358
++
Sbjct: 639 NYQQ 642
>At4g31800.1 68417.m04517 WRKY family transcription factor
Length = 310
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 433 QGKDSPEL*QADHSSNKCNIHPFKWMGFPV--QAGRARRSMS 552
Q + SPE+ Q D K P +++GFP+ +G+ S S
Sbjct: 85 QSRQSPEIEQTDIPIKKRKQDPDEFLGFPIGLSSGKTENSSS 126
>At1g73010.1 68414.m08443 expressed protein similar to phosphatase,
orphan 1 (GI:20196841) [Mus musculus], (GI:20196839)
[Homo sapiens]; contains TIGRFAM TIGR01489:
2,3-diketo-5-methylthio-1-phosphopentane phosphatase
profile; contains TIGRFAM TIGR01488: HAD-superfamily
hydrolase, subfamily IB (PSPase-like)
Length = 295
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 263 LPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA*SATMEDEKLKEK 442
L T V PRK VW + ++ +E GQ IL+ + +E+E KEK
Sbjct: 201 LNTEDYVMPRKNFPVWDLISQNPMLIKAAIREWTDGQSMEMILIGTIEEIRLEEE--KEK 258
Query: 443 ILLNSD 460
+L +++
Sbjct: 259 MLTSAE 264
>At1g55600.1 68414.m06364 WRKY family transcription factor similar
to SPF1 protein GI:484261 from [Ipomoea batatas];
contains Pfam profile: PF03106 WRKY DNA -binding domain
Length = 485
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +1
Query: 211 PQRFRYREVHQQGEQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAKGDHPGPRMHWNL 390
P+R RY + G T + L E E N+ ++R K +P PR ++
Sbjct: 273 PKRRRYEVSNMIGATRTSKTQRIILQMESDEDNPNDGYRWRKYGQKVVKGNPNPRSYFKC 332
Query: 391 TGFSMK 408
T +
Sbjct: 333 TNIECR 338
>At1g01350.1 68414.m00050 zinc finger (CCCH-type/C3HC4-type RING
finger) family protein similar to SP|O15541 Zinc finger
protein 183 {Homo sapiens}; contains Pfam profiles
PF04396: Protein of unknown function, DUF537, PF00097:
Zinc finger, C3HC4 type (RING finger), PF00642: Zinc
finger C-x8-C-x5-C-x3-H type (and similar)
Length = 586
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 301 ERMVNEAEKYRNEDDKAKGD 360
E +E++ YRNEDD+ GD
Sbjct: 555 EEHAHESQYYRNEDDETDGD 574
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,407,970
Number of Sequences: 28952
Number of extensions: 314956
Number of successful extensions: 1224
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -