Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30008
(465 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069569-1|AAL39714.1| 476|Drosophila melanogaster LD29847p pro... 68 7e-12
AE014134-1100|AAF52389.2| 476|Drosophila melanogaster CG9539-PA... 68 7e-12
AB062670-1|BAB78518.1| 476|Drosophila melanogaster DSec61alpha ... 68 7e-12
AE014134-2436|AAN10860.1| 424|Drosophila melanogaster CG31765-P... 31 1.0
AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein. 27 9.4
AY119261-1|AAM51121.1| 940|Drosophila melanogaster SD22791p pro... 27 9.4
AY060685-1|AAL28233.1| 388|Drosophila melanogaster GH12561p pro... 27 9.4
AY059435-1|AAL13341.1| 609|Drosophila melanogaster GH02003p pro... 27 9.4
AL031583-4|CAA20898.1| 1045|Drosophila melanogaster EG:34F3.4 pr... 27 9.4
AE014298-108|AAF45550.2| 940|Drosophila melanogaster CG16989-PA... 27 9.4
AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-P... 27 9.4
AE014296-2294|AAF49806.1| 516|Drosophila melanogaster CG32130-P... 27 9.4
AE014296-2293|AAF49808.1| 516|Drosophila melanogaster CG32130-P... 27 9.4
AE014296-2292|AAF49807.1| 542|Drosophila melanogaster CG32130-P... 27 9.4
AE014296-2291|AAF49809.2| 609|Drosophila melanogaster CG32130-P... 27 9.4
AE014134-532|AAN10405.1| 1028|Drosophila melanogaster CG3558-PB,... 27 9.4
>AY069569-1|AAL39714.1| 476|Drosophila melanogaster LD29847p
protein.
Length = 476
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1
Query: 73 GPSAPGTGILLAVTIIYQYFEIFVKEQAEMGGMSTLLF 186
G GTGILLAVTIIYQYFEIFVKEQ+EMGGM TLLF
Sbjct: 439 GAIGSGTGILLAVTIIYQYFEIFVKEQSEMGGMGTLLF 476
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +3
Query: 3 YIPTAAAFGGLCIGALSVLADFLGAIGSG 89
YIPTAAAFGGLCIGALSV+ADFLGAIGSG
Sbjct: 416 YIPTAAAFGGLCIGALSVMADFLGAIGSG 444
>AE014134-1100|AAF52389.2| 476|Drosophila melanogaster CG9539-PA
protein.
Length = 476
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1
Query: 73 GPSAPGTGILLAVTIIYQYFEIFVKEQAEMGGMSTLLF 186
G GTGILLAVTIIYQYFEIFVKEQ+EMGGM TLLF
Sbjct: 439 GAIGSGTGILLAVTIIYQYFEIFVKEQSEMGGMGTLLF 476
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +3
Query: 3 YIPTAAAFGGLCIGALSVLADFLGAIGSG 89
YIPTAAAFGGLCIGALSV+ADFLGAIGSG
Sbjct: 416 YIPTAAAFGGLCIGALSVMADFLGAIGSG 444
>AB062670-1|BAB78518.1| 476|Drosophila melanogaster DSec61alpha
protein.
Length = 476
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1
Query: 73 GPSAPGTGILLAVTIIYQYFEIFVKEQAEMGGMSTLLF 186
G GTGILLAVTIIYQYFEIFVKEQ+EMGGM TLLF
Sbjct: 439 GAIGSGTGILLAVTIIYQYFEIFVKEQSEMGGMGTLLF 476
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +3
Query: 3 YIPTAAAFGGLCIGALSVLADFLGAIGSG 89
YIPTAAAFGGLCIGALSV+ADFLGAIGSG
Sbjct: 416 YIPTAAAFGGLCIGALSVMADFLGAIGSG 444
>AE014134-2436|AAN10860.1| 424|Drosophila melanogaster CG31765-PA
protein.
Length = 424
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -3
Query: 421 HHPRTRRHA-HNTTPVGALPSTQQILNLKSNFFD----KVQRCIHIQHYQI*KRTPN 266
HHPR+ +H H+TT LP+ QI+ F + QR H+ H I + N
Sbjct: 352 HHPRSHQHVQHSTTASQFLPARPQIMPANDQFSNGSVHPHQRSHHVTHLIIPPQNSN 408
>AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein.
Length = 1854
Score = 27.5 bits (58), Expect = 9.4
Identities = 27/125 (21%), Positives = 53/125 (42%)
Frame = -3
Query: 379 VGALPSTQQILNLKSNFFDKVQRCIHIQHYQI*KRTPNDVDSSRNDNKNGAERSGPTAAI 200
VG P+ ++ + + QR + + Q ++ N V ++ + NG ++ AA+
Sbjct: 181 VGGSPAQSSFVDYNAQ---QQQRLLQLSRQQ--QQLRNAVTAAAS-TANGGDKETLYAAL 234
Query: 199 ITRLRRAVCSCRPSPLVP*QRSRSTGK*W*RRAVSQCPEPMAPRKSASTDRAPMHSPPNA 20
+ R++ + +P+P VP R + P+ PR+S ST R P+
Sbjct: 235 FQQYRQSPTNGQPAPPVPLHRKPAAA-------------PVVPRRSQSTPRPPLQQQQQQ 281
Query: 19 AAVGM 5
G+
Sbjct: 282 QQAGI 286
>AY119261-1|AAM51121.1| 940|Drosophila melanogaster SD22791p
protein.
Length = 940
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -1
Query: 270 LMMSIRAETTIKT-ELNAAVRLPLSLRDLE-EQCAHAAHLRLFLDKDLEVLVNDGDGEQY 97
L+M + T+ T E+ +++ L S R+L+ E + A + D D E+ + +GD +Q
Sbjct: 391 LVMEMLVGTSKLTPEIASSIGLAPSQRNLQMEHASTAETYQELCDSDAEMELEEGDEQQQ 450
Query: 96 PS 91
PS
Sbjct: 451 PS 452
>AY060685-1|AAL28233.1| 388|Drosophila melanogaster GH12561p
protein.
Length = 388
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 109 RRAVSQCPEPMAPRKSASTDRAPMHSPPNAAA 14
RR++S+ M RKSAST AP + AA+
Sbjct: 209 RRSISKSITSMFSRKSASTSTAPPNGSSGAAS 240
>AY059435-1|AAL13341.1| 609|Drosophila melanogaster GH02003p
protein.
Length = 609
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -3
Query: 184 RAVCSCRPSPLVP*QRSRSTGK*W*RRAVSQCPEPMAPRKSAST---DRAPMHSPPNAAA 14
RA P+P + TG A Q EP+ P+ +T + P+ +PPNAAA
Sbjct: 522 RAASGAAPAPSAT-APAVDTGAVAASEAAGQNAEPVTPQPQDATKMQEPIPLPAPPNAAA 580
Query: 13 V 11
V
Sbjct: 581 V 581
>AL031583-4|CAA20898.1| 1045|Drosophila melanogaster EG:34F3.4
protein.
Length = 1045
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -1
Query: 270 LMMSIRAETTIKT-ELNAAVRLPLSLRDLE-EQCAHAAHLRLFLDKDLEVLVNDGDGEQY 97
L+M + T+ T E+ +++ L S R+L+ E + A + D D E+ + +GD +Q
Sbjct: 496 LVMEMLVGTSKLTPEIASSIGLAPSQRNLQMEHASTAETYQELCDSDAEMELEEGDEQQQ 555
Query: 96 PS 91
PS
Sbjct: 556 PS 557
>AE014298-108|AAF45550.2| 940|Drosophila melanogaster CG16989-PA
protein.
Length = 940
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -1
Query: 270 LMMSIRAETTIKT-ELNAAVRLPLSLRDLE-EQCAHAAHLRLFLDKDLEVLVNDGDGEQY 97
L+M + T+ T E+ +++ L S R+L+ E + A + D D E+ + +GD +Q
Sbjct: 391 LVMEMLVGTSKLTPEIASSIGLAPSQRNLQMEHASTAETYQELCDSDAEMELEEGDEQQQ 450
Query: 96 PS 91
PS
Sbjct: 451 PS 452
>AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-PD,
isoform D protein.
Length = 1854
Score = 27.5 bits (58), Expect = 9.4
Identities = 27/125 (21%), Positives = 53/125 (42%)
Frame = -3
Query: 379 VGALPSTQQILNLKSNFFDKVQRCIHIQHYQI*KRTPNDVDSSRNDNKNGAERSGPTAAI 200
VG P+ ++ + + QR + + Q ++ N V ++ + NG ++ AA+
Sbjct: 181 VGGSPAQSSFVDYNAQ---QQQRLLQLSRQQ--QQLRNAVTAAAS-TANGGDKETLYAAL 234
Query: 199 ITRLRRAVCSCRPSPLVP*QRSRSTGK*W*RRAVSQCPEPMAPRKSASTDRAPMHSPPNA 20
+ R++ + +P+P VP R + P+ PR+S ST R P+
Sbjct: 235 FQQYRQSPTNGQPAPPVPLHRKPAAA-------------PVVPRRSQSTPRPPLQQQQQQ 281
Query: 19 AAVGM 5
G+
Sbjct: 282 QQAGI 286
>AE014296-2294|AAF49806.1| 516|Drosophila melanogaster CG32130-PD,
isoform D protein.
Length = 516
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -3
Query: 184 RAVCSCRPSPLVP*QRSRSTGK*W*RRAVSQCPEPMAPRKSAST---DRAPMHSPPNAAA 14
RA P+P + TG A Q EP+ P+ +T + P+ +PPNAAA
Sbjct: 429 RAASGAAPAPSAT-APAVDTGAVAASEAAGQNAEPVTPQPQDATKMQEPIPLPAPPNAAA 487
Query: 13 V 11
V
Sbjct: 488 V 488
>AE014296-2293|AAF49808.1| 516|Drosophila melanogaster CG32130-PB,
isoform B protein.
Length = 516
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -3
Query: 184 RAVCSCRPSPLVP*QRSRSTGK*W*RRAVSQCPEPMAPRKSAST---DRAPMHSPPNAAA 14
RA P+P + TG A Q EP+ P+ +T + P+ +PPNAAA
Sbjct: 429 RAASGAAPAPSAT-APAVDTGAVAASEAAGQNAEPVTPQPQDATKMQEPIPLPAPPNAAA 487
Query: 13 V 11
V
Sbjct: 488 V 488
>AE014296-2292|AAF49807.1| 542|Drosophila melanogaster CG32130-PC,
isoform C protein.
Length = 542
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -3
Query: 184 RAVCSCRPSPLVP*QRSRSTGK*W*RRAVSQCPEPMAPRKSAST---DRAPMHSPPNAAA 14
RA P+P + TG A Q EP+ P+ +T + P+ +PPNAAA
Sbjct: 455 RAASGAAPAPSAT-APAVDTGAVAASEAAGQNAEPVTPQPQDATKMQEPIPLPAPPNAAA 513
Query: 13 V 11
V
Sbjct: 514 V 514
>AE014296-2291|AAF49809.2| 609|Drosophila melanogaster CG32130-PA,
isoform A protein.
Length = 609
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -3
Query: 184 RAVCSCRPSPLVP*QRSRSTGK*W*RRAVSQCPEPMAPRKSAST---DRAPMHSPPNAAA 14
RA P+P + TG A Q EP+ P+ +T + P+ +PPNAAA
Sbjct: 522 RAASGAAPAPSAT-APAVDTGAVAASEAAGQNAEPVTPQPQDATKMQEPIPLPAPPNAAA 580
Query: 13 V 11
V
Sbjct: 581 V 581
>AE014134-532|AAN10405.1| 1028|Drosophila melanogaster CG3558-PB,
isoform B protein.
Length = 1028
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 109 RRAVSQCPEPMAPRKSASTDRAPMHSPPNAAA 14
RR++S+ M RKSAST AP + AA+
Sbjct: 849 RRSISKSITSMFSRKSASTSTAPPNGSSGAAS 880
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,914,786
Number of Sequences: 53049
Number of extensions: 465291
Number of successful extensions: 1660
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1660
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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