BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20095 (724 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 27 0.14 DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 27 0.18 AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 22 6.7 AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 6.7 AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 22 6.7 AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.9 >DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 469 Score = 27.5 bits (58), Expect = 0.14 Identities = 19/45 (42%), Positives = 21/45 (46%) Frame = +3 Query: 441 EGITFTNSYVTSPICCPSRASLLQACTFTTTRP*TIVFTADAMER 575 E IT NS +SP P RA+L Q FTT P I D R Sbjct: 406 ESITSVNS-TSSPKPFPRRATLAQLHNFTTMTPQEIAQWIDRRSR 449 >DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monooxygenase protein. Length = 499 Score = 27.1 bits (57), Expect = 0.18 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 4/34 (11%) Frame = +2 Query: 56 SQVIVSKKQLPLF----ELIMAKKGVVAFVKDFY 145 S+ +V K +P F +LI+ KK FVKD Y Sbjct: 31 SRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDIY 64 >AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. Length = 136 Score = 21.8 bits (44), Expect = 6.7 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +1 Query: 472 RHRYAVQVEPVCYRHVRSQPQD 537 RHRY Q++P H P+D Sbjct: 55 RHRYNFQLKPYNPEHKPPGPKD 76 >AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic acetylcholine receptorApisa2 subunit protein. Length = 541 Score = 21.8 bits (44), Expect = 6.7 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -1 Query: 625 GFLKYSSERLFLVIFPVLSI 566 GF+ +RLFL IF + SI Sbjct: 479 GFVAMVLDRLFLWIFTIASI 498 >AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. Length = 135 Score = 21.8 bits (44), Expect = 6.7 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +1 Query: 472 RHRYAVQVEPVCYRHVRSQPQD 537 RHRY Q++P H P+D Sbjct: 56 RHRYNFQLKPYNPEHKPPGPKD 77 >AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase protein. Length = 580 Score = 21.4 bits (43), Expect = 8.9 Identities = 11/41 (26%), Positives = 20/41 (48%) Frame = +1 Query: 508 YRHVRSQPQDREQ*SSRRMLWRELEISRETDVRYYTSGSRI 630 +R++ + +R S RM+ E ++YY SGS + Sbjct: 271 WRNLMDEHSNRTN-SDPRMILTEAYTEFNLTIKYYKSGSTV 310 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 216,411 Number of Sequences: 438 Number of extensions: 5381 Number of successful extensions: 6 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 22413960 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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