Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00097
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    25   0.45 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.0  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   9.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.7  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +1

Query: 481 GRCRQQWRVTQDSDRPNRTRAQGGEGPIQRRQGLSRQQCQHKCSI 615
           G CR   R  ++SD    TR      P+     + RQ C  K  +
Sbjct: 49  GDCRDVVRCDKNSDNNGATRLASVRCPVGLAFDIERQTCDWKTKV 93


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 103 PHGSTFRLGADSGRFSQCCSRPPCEQR 183
           P+G T   G D G +   CS  PCE +
Sbjct: 88  PYGYT---GKDCGEYVDWCSTNPCENQ 111


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 484 RCRQQWRVTQDSDRPNRTRA 543
           RC   W  T  S  PNR RA
Sbjct: 169 RCPPDWEGTTLSQSPNRRRA 188


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 75  LITKLSVLVASWINISAWG*LRKIFSVL 158
           ++  LSV+ +S+++I+ W  L K F  +
Sbjct: 484 VLNLLSVIKSSFLDINTWKMLVKSFDAI 511


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 516 ILRHPPLLAAPSWVRLQTTHHLKTAG 439
           +L H PLLA PS+ +      L + G
Sbjct: 362 LLGHMPLLADPSFAQFSQEIGLASLG 387


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 317 GRLHRG*RQTRGEERSAWLHIASIHSSLRFAGGLY 421
           G  H G  ++     +AW  + S  S L  +GG++
Sbjct: 172 GATHHGGIKSDSVTSNAWWDVHSTGSWLDMSGGMH 206


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2

Query: 448 DSRDSTDSAVQP 413
           +SR+S+DS VQP
Sbjct: 85  NSRESSDSLVQP 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,283
Number of Sequences: 336
Number of extensions: 3751
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)