BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesV0280.Seq (766 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_1010 + 8561656-8561764,8563666-8563919,8564309-8564331,856... 32 0.58 11_06_0062 + 19709801-19710832,19712383-19712568,19712661-197128... 31 1.0 04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 31 1.0 01_05_0463 + 22461169-22461216,22463153-22463248,22463334-224634... 28 9.4 >07_01_1010 + 8561656-8561764,8563666-8563919,8564309-8564331, 8564926-8564962,8565503-8565985 Length = 301 Score = 31.9 bits (69), Expect = 0.58 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +1 Query: 70 KLRVIPNKMASSYFTESEAPRDFRVSSTESDGQYTKCH 183 + R +P++M S T + AP FRV E CH Sbjct: 198 RFRALPSRMGSRIVTAAGAPEPFRVDGVEDGCSRASCH 235 >11_06_0062 + 19709801-19710832,19712383-19712568,19712661-19712867, 19712940-19713078,19713172-19713380,19713520-19714134 Length = 795 Score = 31.1 bits (67), Expect = 1.0 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 11/99 (11%) Frame = +3 Query: 282 KLSKLLRLKMNRKHILDRCERLLAPKLKKDSLLTEAKQCRDKID----LLKLAINQRR-- 443 KL+K L+ K++R H L E+L L+K S L+ RD+ D L++ + + R Sbjct: 688 KLNKALQFKLDRTHSLAYREKLKEQVLEKQSSLSRIGASRDENDSAMAKLEMELGRHRWD 747 Query: 444 -----SNVDXKXKELSELKTYNTELALRASKISEKGSKS 545 ++ + ELS LK ++ A A + +EK +S Sbjct: 748 GQMMSKKMEDEEAELSRLKAEDSN-AQEACRDAEKQFRS 785 >04_04_1104 - 30928475-30928501,30929008-30929110,30929287-30929340, 30929803-30929895,30930063-30930140,30930416-30930527, 30930618-30930756,30930823-30930910,30930984-30931079, 30931675-30931781,30931874-30932009,30932089-30932186, 30932954-30933047,30933132-30933301,30933749-30933819, 30936066-30936194,30936552-30936654,30936764-30936907, 30937123-30937245,30937482-30937563,30939044-30939120, 30939261-30939315,30939365-30939443,30939544-30939620, 30939739-30939869,30939947-30940120,30940245-30940310, 30940937-30941572 Length = 1113 Score = 31.1 bits (67), Expect = 1.0 Identities = 14/50 (28%), Positives = 22/50 (44%) Frame = +1 Query: 112 TESEAPRDFRVSSTESDGQYTKCHLCYTVKRNFYCTDCIKEGNFVHSSCL 261 ++ +P + STESD ++ C +C T + C VH CL Sbjct: 620 SDDYSPSESDHGSTESDEEFHMCQICNTEEEKTLLLHCSGCSRHVHPGCL 669 >01_05_0463 + 22461169-22461216,22463153-22463248,22463334-22463446, 22463479-22463494,22463939-22464031,22464118-22464261, 22464508-22464596,22464687-22464792,22464874-22464961, 22465585-22465703,22465788-22465952,22466235-22466404, 22466488-22466597,22466682-22466791,22466886-22466996, 22467082-22467183,22467266-22467471,22467563-22467881, 22467983-22468093 Length = 771 Score = 27.9 bits (59), Expect = 9.4 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = +1 Query: 619 RWAALRRSWLPPTGXLL 669 RW + RSWL PTG LL Sbjct: 628 RWYHVPRSWLSPTGNLL 644 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,224,561 Number of Sequences: 37544 Number of extensions: 297209 Number of successful extensions: 699 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 688 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 699 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2051430072 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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