BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesV0280.Seq (766 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44 SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8 SB_19576| Best HMM Match : Somatomedin_B (HMM E-Value=2.7) 29 4.1 SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 4.1 SB_37043| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00036) 29 5.4 SB_56293| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_52108| Best HMM Match : DUF1053 (HMM E-Value=6) 28 7.2 SB_42243| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 28 9.5 SB_33182| Best HMM Match : rve (HMM E-Value=0.00043) 28 9.5 SB_6203| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5 SB_39575| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5 >SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3259 Score = 32.3 bits (70), Expect = 0.44 Identities = 23/94 (24%), Positives = 42/94 (44%) Frame = +3 Query: 267 DRYSEKLSKLLRLKMNRKHILDRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRS 446 DR + + +R++ + D ERL K+ TE QC +K+ L+ + Sbjct: 2375 DRIATLEKRYVRMQHEVTGLNDDNERLETELATKE---TELIQCEEKVRDLQEKLELSEQ 2431 Query: 447 NVDXKXKELSELKTYNTELALRASKISEKGSKSG 548 N++ ++ L ELA+R + ++E K G Sbjct: 2432 NLNQLLRKAEALPKIEEELAVRMAALNEAAEKQG 2465 >SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1553 Score = 30.3 bits (65), Expect = 1.8 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 1/114 (0%) Frame = +3 Query: 195 SKEELLLHGLYKRRKFCT*FMPYSDRYSEKLSKLLRLKMNRKHILDRCERLLAP-KLKKD 371 S+ E+L +Y R T +R ++ L+ R + + E L+ K K D Sbjct: 1435 SEHEVLAEEVYTRYSSRT--RASIERIRQQYEDCLQDVQTRNNSVVEMENKLSEMKSKAD 1492 Query: 372 SLLTEAKQCRDKIDLLKLAINQRRSNVDXKXKELSELKTYNTELALRASKISEK 533 + + C D I + L I+ SN+D K E + + +L+ ++ E+ Sbjct: 1493 EYTDQLEHCEDTIREMNLKIHSLESNIDQKDHENAMKEDAINQLSSEMDELQEQ 1546 >SB_19576| Best HMM Match : Somatomedin_B (HMM E-Value=2.7) Length = 149 Score = 29.1 bits (62), Expect = 4.1 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Frame = +1 Query: 94 MASSYFTESEAPRDFRVSSTESDGQYTKCHLCYTVKRNFYC-TDCI 228 M TE D + S +SD Q C C++ K + C DC+ Sbjct: 1 MCCHSITEYSTKLDEDIKSLDSDFQKILCKFCFSTKESLRCPADCL 46 >SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) Length = 4160 Score = 29.1 bits (62), Expect = 4.1 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +3 Query: 279 EKLSKLLRLKMNRKHILDRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDX 458 EK+ + RL+ + I E L PK+K+ S T+ + R+ ++ LK INQ N+ Sbjct: 68 EKMELIARLENQDELIKQLREGLRNPKVKEKSENTKLNKEREILE-LKGVINQHEINIKQ 126 Query: 459 KXKEL 473 +EL Sbjct: 127 LQQEL 131 >SB_37043| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00036) Length = 1336 Score = 28.7 bits (61), Expect = 5.4 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +1 Query: 67 IKLRVIPNKMASSYFTESEAPR-DFRVSSTESDGQYTKCH-LCYTVKRNFYCTDCIKEGN 240 I+L ++ + A++ + P D RV + G Y + + R++YCT C K N Sbjct: 395 IELNIVSREHANTVIFSGDLPDPDHRVYLYLARGHYDYIKSMTAVLGRSYYCTACKKGYN 454 Query: 241 FVHSSCL 261 V +C+ Sbjct: 455 NVRHACV 461 >SB_56293| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 300 Score = 28.3 bits (60), Expect = 7.2 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +1 Query: 91 KMASSYFTESEAPRDFRVSSTESDGQYTKCHLCYTVKRNFYCTDCI 228 +M F + +P V GQY K TV+RNFY DC+ Sbjct: 39 QMLLHIFGATSSPSCSNVDLRRCRGQYGKL-AADTVRRNFYVDDCL 83 >SB_52108| Best HMM Match : DUF1053 (HMM E-Value=6) Length = 349 Score = 28.3 bits (60), Expect = 7.2 Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%) Frame = -2 Query: 159 TLC*RNSKISRSLAFSEITRSHF--IRDYAQFNSVYMSSLDF 40 TL +++ + ++ + + RSH+ +R A+F+S Y S +DF Sbjct: 151 TLQTKDTTLQEAITTATLARSHYSRLRSDAEFDSFYQSCVDF 192 >SB_42243| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 762 Score = 28.3 bits (60), Expect = 7.2 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Frame = +3 Query: 360 LKKDSLLTEAKQCRDKIDLLKLAIN---QRRSNVDXKXKELSELKTYNTELALRASKISE 530 LKKDS +TE+ + + +L L QRR + E S++KT+ T + +S Sbjct: 4 LKKDSGITESTRIETFLFVLVLTAPKSLQRRKVIRETWIEQSKIKTFVTRFVIGGKTLSS 63 Query: 531 KGSKS 545 + KS Sbjct: 64 EERKS 68 >SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) Length = 3071 Score = 27.9 bits (59), Expect = 9.5 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +3 Query: 375 LLTEAKQCRDKIDLLKLAINQRRSNVDXKXKELSELKTYNTEL 503 LLT D+ID LK AI++ + ++ ELK N +L Sbjct: 1380 LLTSKDFLEDEIDNLKAAIDKTEKEKEDLKADIDELKAENIKL 1422 >SB_33182| Best HMM Match : rve (HMM E-Value=0.00043) Length = 801 Score = 27.9 bits (59), Expect = 9.5 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = -2 Query: 666 KXPSWRKPRPAXCSPTSQPVHCTD 595 K PSWR PA +QP C D Sbjct: 359 KTPSWRTLAPAHAPSATQPAACCD 382 >SB_6203| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 741 Score = 27.9 bits (59), Expect = 9.5 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -2 Query: 420 SVGQFCLYIVLLLSGGSPFLASGLGAS 340 SVG L I LL +GG+P + GLG S Sbjct: 49 SVGSSKLAITLLRNGGNPNIQDGLGKS 75 >SB_39575| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 770 Score = 27.9 bits (59), Expect = 9.5 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = -2 Query: 666 KXPSWRKPRPAXCSPTSQPVHCTD 595 K PSWR PA +QP C D Sbjct: 330 KTPSWRTLAPAHAPSATQPAACCD 353 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,933,629 Number of Sequences: 59808 Number of extensions: 354249 Number of successful extensions: 840 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 744 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 819 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2072022557 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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