BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesV0272.Seq (793 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.1 EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.1 EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.1 DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 1.1 AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 1.4 EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5 EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5 EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5 DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.5 AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 7.5 AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 7.5 EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 9.9 AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 9.9 AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 9.9 AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 9.9 >EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 3 protein. Length = 461 Score = 24.6 bits (51), Expect = 1.1 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = -3 Query: 458 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 327 LP DS L L V + S V LN++A+ T V + F Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYF 261 >EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 2 protein. Length = 461 Score = 24.6 bits (51), Expect = 1.1 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = -3 Query: 458 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 327 LP DS L L V + S V LN++A+ T V + F Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYF 261 >EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 1 protein. Length = 461 Score = 24.6 bits (51), Expect = 1.1 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = -3 Query: 458 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 327 LP DS L L V + S V LN++A+ T V + F Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYF 261 >DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 24.6 bits (51), Expect = 1.1 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = -3 Query: 458 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 327 LP DS L L V + S V LN++A+ T V + F Sbjct: 286 LPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYF 329 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 24.2 bits (50), Expect = 1.4 Identities = 11/35 (31%), Positives = 21/35 (60%) Frame = +2 Query: 425 QGQDKPESQLEVNRSVGEQQGLLQDLEHERNQYLV 529 Q DK ++ + + +QQ L+Q L+ ++QYL+ Sbjct: 165 QTADKKKASAPLQQLALQQQRLIQQLQITQSQYLL 199 >EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 6 protein. Length = 461 Score = 23.4 bits (48), Expect = 2.5 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 458 LPADSRACLVLAVAVGRSAIVALNIIAQ 375 LP DS L L V + S V LN++A+ Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAE 245 >EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 5 protein. Length = 461 Score = 23.4 bits (48), Expect = 2.5 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 458 LPADSRACLVLAVAVGRSAIVALNIIAQ 375 LP DS L L V + S V LN++A+ Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAE 245 >EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 4 protein. Length = 461 Score = 23.4 bits (48), Expect = 2.5 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 458 LPADSRACLVLAVAVGRSAIVALNIIAQ 375 LP DS L L V + S V LN++A+ Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAE 245 >DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 23.4 bits (48), Expect = 2.5 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 458 LPADSRACLVLAVAVGRSAIVALNIIAQ 375 LP DS L L V + S V LN++A+ Sbjct: 286 LPPDSGEKLTLGVTILLSLTVFLNLVAE 313 >AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. Length = 400 Score = 21.8 bits (44), Expect = 7.5 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = +2 Query: 173 GEEERSHHKCREQTDTKQQDELHGV 247 GE S + RE ++ D+LH V Sbjct: 249 GERSCSRDRSREYKKDRRYDQLHNV 273 >AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein protein. Length = 352 Score = 21.8 bits (44), Expect = 7.5 Identities = 13/46 (28%), Positives = 20/46 (43%) Frame = +3 Query: 315 LIFAENAIKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSPRVS 452 L E IK+ ++ + N +G P GDG + SP+ S Sbjct: 307 LCLTERQIKIWFQNRRMKWKKENKSKGT---PGSGDGDTEISPQTS 349 >EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. Length = 683 Score = 21.4 bits (43), Expect = 9.9 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +3 Query: 81 VPNDILEEQLYNSVVVADYDSAVEK 155 VP+++ + LYN +VV++ S K Sbjct: 566 VPDEVPSDVLYNRLVVSEDGSETFK 590 >AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. Length = 683 Score = 21.4 bits (43), Expect = 9.9 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +3 Query: 81 VPNDILEEQLYNSVVVADYDSAVEK 155 VP+++ + LYN +VV++ S K Sbjct: 566 VPDEVPSDVLYNRLVVSEDGSETFK 590 >AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein protein. Length = 427 Score = 21.4 bits (43), Expect = 9.9 Identities = 8/22 (36%), Positives = 13/22 (59%) Frame = +2 Query: 176 EEERSHHKCREQTDTKQQDELH 241 +EER K R+Q++ + LH Sbjct: 181 QEERQRTKERDQSEVESTSSLH 202 >AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein protein. Length = 427 Score = 21.4 bits (43), Expect = 9.9 Identities = 8/22 (36%), Positives = 13/22 (59%) Frame = +2 Query: 176 EEERSHHKCREQTDTKQQDELH 241 +EER K R+Q++ + LH Sbjct: 181 QEERQRTKERDQSEVESTSSLH 202 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 187,400 Number of Sequences: 438 Number of extensions: 3694 Number of successful extensions: 19 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 25003662 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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