Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0025
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein. 32 1.3
BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein. 32 1.3
BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein. 32 1.3
AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein p... 32 1.3
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 31 4.1
BX640673-1|CAE45805.1| 648|Homo sapiens hypothetical protein pr... 29 9.5
BC126307-1|AAI26308.1| 986|Homo sapiens MYOCD protein protein. 29 9.5
AY764180-1|AAV33439.1| 986|Homo sapiens myocardin protein. 29 9.5
AK097821-1|BAC05177.1| 684|Homo sapiens protein ( Homo sapiens ... 29 9.5
AF532596-1|AAN33040.1| 938|Homo sapiens myocardin transcription... 29 9.5
>X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.
Length = 1028
Score = 32.3 bits (70), Expect = 1.3
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 97 VLPALSAEDVSYQACVDKYSRKGYQP 174
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein.
Length = 1028
Score = 32.3 bits (70), Expect = 1.3
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 97 VLPALSAEDVSYQACVDKYSRKGYQP 174
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein.
Length = 1028
Score = 32.3 bits (70), Expect = 1.3
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 97 VLPALSAEDVSYQACVDKYSRKGYQP 174
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein
protein.
Length = 1097
Score = 32.3 bits (70), Expect = 1.3
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 97 VLPALSAEDVSYQACVDKYSRKGYQP 174
VL AL +E + Y V KY RKGY+P
Sbjct: 944 VLQALGSEPIQYAVPVVKYDRKGYKP 969
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 30.7 bits (66), Expect = 4.1
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 300 EYIEDENV-EFPTCCARLRCVVEVNGERIVQTRGQPGELFPDKPWKGQQNEPNPAVVGMS 476
EY E E+V E PT E+NG +GQ GE +P + P PA G +
Sbjct: 277 EYKEAESVTEGPTVTEETIAQTEINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPA--GPA 334
Query: 477 GIQQTP 494
GI P
Sbjct: 335 GIMGPP 340
>BX640673-1|CAE45805.1| 648|Homo sapiens hypothetical protein
protein.
Length = 648
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -1
Query: 436 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 278
PF SGN P + T+ P T T N S S+ Y + S++ S
Sbjct: 108 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 160
>BC126307-1|AAI26308.1| 986|Homo sapiens MYOCD protein protein.
Length = 986
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -1
Query: 436 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 278
PF SGN P + T+ P T T N S S+ Y + S++ S
Sbjct: 403 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 455
>AY764180-1|AAV33439.1| 986|Homo sapiens myocardin protein.
Length = 986
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -1
Query: 436 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 278
PF SGN P + T+ P T T N S S+ Y + S++ S
Sbjct: 403 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 455
>AK097821-1|BAC05177.1| 684|Homo sapiens protein ( Homo sapiens
cDNA FLJ40502 fis, clone TESTI2045199. ).
Length = 684
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -1
Query: 436 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 278
PF SGN P + T+ P T T N S S+ Y + S++ S
Sbjct: 307 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 359
>AF532596-1|AAN33040.1| 938|Homo sapiens myocardin transcription
factor protein.
Length = 938
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -1
Query: 436 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 278
PF SGN P + T+ P T T N S S+ Y + S++ S
Sbjct: 403 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 455
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,963,531
Number of Sequences: 237096
Number of extensions: 2416745
Number of successful extensions: 10179
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10179
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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