Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0020
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2E1R1 Cluster: Ankyrin repeat protein, putative; n=1; ...    35   1.3  
UniRef50_A0BLV7 Cluster: Chromosome undetermined scaffold_115, w...    32   8.9  

>UniRef50_A2E1R1 Cluster: Ankyrin repeat protein, putative; n=1;
           Trichomonas vaginalis G3|Rep: Ankyrin repeat protein,
           putative - Trichomonas vaginalis G3
          Length = 503

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 462 YNVKTALTECKKYNNYHEWFIYI 530
           YN+K  L +C KYNNY  +F+Y+
Sbjct: 220 YNLKIDLNQCCKYNNYEAFFVYL 242


>UniRef50_A0BLV7 Cluster: Chromosome undetermined scaffold_115, whole
            genome shotgun sequence; n=3; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_115, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 2265

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 450  VMFYYNVKTALTECKKYNNYHEWFIYIL*IHTKHISFQL 566
            +++  N + A+  C+ +NNY +W I I  I    +S QL
Sbjct: 1480 IIYQLNYENAVKLCQSFNNYQDWVILIQKIKEPRLSKQL 1518


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,080,580
Number of Sequences: 1657284
Number of extensions: 8057564
Number of successful extensions: 17627
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17620
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)