Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0018
(678 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 31 0.57
U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical pr... 31 0.57
U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical pr... 31 0.57
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 31 1.00
AF036703-2|AAB88557.3| 535|Caenorhabditis elegans Hypothetical ... 31 1.00
Z81481-2|CAB03948.1| 593|Caenorhabditis elegans Hypothetical pr... 30 1.3
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 29 3.0
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 29 4.0
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 28 5.3
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 28 5.3
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 28 5.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 5.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 5.3
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 28 5.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 5.3
AL117199-2|CAB55041.1| 189|Caenorhabditis elegans Hypothetical ... 28 7.0
AL117199-1|CAB55038.1| 189|Caenorhabditis elegans Hypothetical ... 28 7.0
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/73 (23%), Positives = 36/73 (49%)
Frame = +2
Query: 251 QASASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRS 430
Q + +Q+++ +++ + P + N Q + ++LQN II+ +PP + +
Sbjct: 1001 QQNIPIQHQQQQQNMMNQPMQSNNNQNMANIQNQQNLQNPPIIQQQQQQQIPPAKVAPK- 1059
Query: 431 PRTRKVETPRKTP 469
PR R + P + P
Sbjct: 1060 PRYRGKKNPAQEP 1072
>U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical
protein F28E10.1c protein.
Length = 873
Score = 31.5 bits (68), Expect = 0.57
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 265 STVRRNK-KRFMLCSQEKEKHTAIAN*IKS*ELTKSEHYRSSVSNFRSSKNN*KTFASDS 441
S +R++K K+ + S + ++AN +KS +LTK H S + S +N KT S S
Sbjct: 85 SNIRKSKEKKAKMSSTPRSPLMSMANSVKS-KLTKITHLGRSSNESSGSSSNIKTSQSFS 143
Query: 442 *SRNPSQ 462
R P Q
Sbjct: 144 GIRQPKQ 150
>U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical
protein F28E10.1a protein.
Length = 1134
Score = 31.5 bits (68), Expect = 0.57
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 265 STVRRNK-KRFMLCSQEKEKHTAIAN*IKS*ELTKSEHYRSSVSNFRSSKNN*KTFASDS 441
S +R++K K+ + S + ++AN +KS +LTK H S + S +N KT S S
Sbjct: 131 SNIRKSKEKKAKMSSTPRSPLMSMANSVKS-KLTKITHLGRSSNESSGSSSNIKTSQSFS 189
Query: 442 *SRNPSQ 462
R P Q
Sbjct: 190 GIRQPKQ 196
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 30.7 bits (66), Expect = 1.00
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 120 LDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESK---LDDWRVPFKRL 260
+ KLQ+ DH K +G L+ V+K + SK LDD+ P K L
Sbjct: 765 IKKLQNQWGDHKKDMGSLENAVAKAKYFVAMINVSKLKTLDDYSAPLKEL 814
>AF036703-2|AAB88557.3| 535|Caenorhabditis elegans Hypothetical
protein T11F8.4 protein.
Length = 535
Score = 30.7 bits (66), Expect = 1.00
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Frame = +2
Query: 200 KYSNRS*KQARRLEGTFQASASVQYEETK--RDSCS-VPKRKKNI---QPLPIKSKAKSL 361
K S+R K R+ +G+ + +ETK R+S + R+ N + + KSK
Sbjct: 402 KNSDRKKKSERKKKGSKGDMILEKSKETKDHRESGRRLTDREANAVGGKSIDAKSKGNKD 461
Query: 362 QNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRKTPTLRSHKGLENKHSS*KSR 523
Q I P S+ PK KRS T K+ P KTP +SH E + SS S+
Sbjct: 462 MEQRTIMIDKPGSITPKS--KRSRTTTKI--PHKTPH-KSHLRKEKQESSANSK 510
>Z81481-2|CAB03948.1| 593|Caenorhabditis elegans Hypothetical
protein C38D9.2 protein.
Length = 593
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 326 QPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRKT 466
Q PIKS S +N N +++F + + ++SP + VETP KT
Sbjct: 240 QSSPIKSDGYSSENSNEQDSSFETTTEETPLPEKSP-PKAVETPMKT 285
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 54 QRARHTDALQRIMISFK-HFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKL 230
+RA HT ++ M + H+E+ LQD+V L+ + KLSQ P L
Sbjct: 683 ERASHTAQSEQEMKQLEAHYERAQKMLQDNVEQMNVENRGLRDEIEKLSQQMAALPRGGL 742
Query: 231 DD 236
++
Sbjct: 743 NE 744
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 157 LPWSFTSSCNLSSFFSKCLKEIIIRCKASVWRARCSAMIM 38
+P +F S L + C K I++ C A V R A+I+
Sbjct: 368 VPDNFLSPFRLLTVVKNCTKPIVVHCSAGVGRTGTLALIL 407
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +3
Query: 108 FEKKLDKLQDDVND---HGKTLGDLKTMV--SKLSQNTVIGPESKLDDWRVPFKRLHQYS 272
+EKK++ LQ VND H +T LK + K++Q + + +LD ++L++
Sbjct: 529 YEKKIEDLQSQVNDLLMHFETQNKLKEQLDAGKITQEEITESQVELDSSSSSSRKLNRKK 588
Query: 273 TK 278
K
Sbjct: 589 KK 590
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +2
Query: 170 PQDYGEQTFTKYSNRS*KQARRLEGTFQASASVQYEETKRDSCSVPKRKKNIQPLPIKSK 349
P D E K +R ++ ++ E + SV YE +DS + +I LP +
Sbjct: 46 PSDESELVVVKNVSRVVEEPKKKEVKVKEQESVDYERVAKDSEPSEYKTIDIHRLPNDLQ 105
Query: 350 AKSLQNQNIIEAAF 391
AK + ++ + + A+
Sbjct: 106 AKYIIHEELGKGAY 119
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +2
Query: 170 PQDYGEQTFTKYSNRS*KQARRLEGTFQASASVQYEETKRDSCSVPKRKKNIQPLPIKSK 349
P D E K +R ++ ++ E + SV YE +DS + +I LP +
Sbjct: 46 PSDESELVVVKNVSRVVEEPKKKEVKVKEQESVDYERVAKDSEPSEYKTIDIHRLPNDLQ 105
Query: 350 AKSLQNQNIIEAAF 391
AK + ++ + + A+
Sbjct: 106 AKYIIHEELGKGAY 119
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +2
Query: 170 PQDYGEQTFTKYSNRS*KQARRLEGTFQASASVQYEETKRDSCSVPKRKKNIQPLPIKSK 349
P D E K +R ++ ++ E + SV YE +DS + +I LP +
Sbjct: 15872 PSDESELVVVKNVSRVVEEPKKKEVKVKEQESVDYERVAKDSEPSEYKTIDIHRLPNDLQ 15931
Query: 350 AKSLQNQNIIEAAF 391
AK + ++ + + A+
Sbjct: 15932 AKYIIHEELGKGAY 15945
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +2
Query: 170 PQDYGEQTFTKYSNRS*KQARRLEGTFQASASVQYEETKRDSCSVPKRKKNIQPLPIKSK 349
P D E K +R ++ ++ E + SV YE +DS + +I LP +
Sbjct: 15872 PSDESELVVVKNVSRVVEEPKKKEVKVKEQESVDYERVAKDSEPSEYKTIDIHRLPNDLQ 15931
Query: 350 AKSLQNQNIIEAAF 391
AK + ++ + + A+
Sbjct: 15932 AKYIIHEELGKGAY 15945
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +1
Query: 310 EKEKHTAIAN*IKS*ELTKSEHYRSSVSNFRSSKNN 417
EK+ + AI N +K+ ++E+Y+ ++ ++R SKNN
Sbjct: 267 EKKNNLAI-NIVKTDNEEETEYYKPTIESYRISKNN 301
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 69 TDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQ 200
+D LQ MIS+++ + +L DD N + L + + ++S+LSQ
Sbjct: 364 SDELQERMISYQNNGIDVQQLLDDSNQKTELLDENERILSQLSQ 407
>AL117199-2|CAB55041.1| 189|Caenorhabditis elegans Hypothetical
protein Y43F11A.4 protein.
Length = 189
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 182 GEQTFTKYSNRS*KQARR--LEGTFQASASVQYEETKRDSCSVPKRKKNIQPLPIKSKAK 355
GE + ++N+ + R LE Q +A+ + DSC +PK+K + I ++K
Sbjct: 111 GELSAAMFTNKMVMEQRMKDLEKMDQKTANNLFVAALGDSCFIPKKKVDYSKFKITKRSK 170
Query: 356 S 358
S
Sbjct: 171 S 171
>AL117199-1|CAB55038.1| 189|Caenorhabditis elegans Hypothetical
protein Y43F11A.1 protein.
Length = 189
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 182 GEQTFTKYSNRS*KQARR--LEGTFQASASVQYEETKRDSCSVPKRKKNIQPLPIKSKAK 355
GE + ++N+ + R LE Q +A+ + DSC +PK+K + I ++K
Sbjct: 111 GELSAAMFTNKMVMEQRMKDLEKMDQKTANNLFVAALGDSCFIPKKKVDYSKFKITKRSK 170
Query: 356 S 358
S
Sbjct: 171 S 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,665,064
Number of Sequences: 27780
Number of extensions: 265822
Number of successful extensions: 887
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -