Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0015
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 179 1e-45
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 179 1e-45
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 178 3e-45
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 175 1e-44
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 174 4e-44
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 173 7e-44
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 173 1e-43
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 171 3e-43
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 171 3e-43
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 99 3e-21
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 99 3e-21
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 98 4e-21
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 98 4e-21
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 98 4e-21
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 98 4e-21
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 96 2e-20
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 71 8e-13
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 70 1e-12
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.44
At4g37190.1 68417.m05265 expressed protein 30 1.0
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 1.8
At2g26850.1 68415.m03221 F-box family protein contains Pfam PF00... 29 1.8
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 29 2.4
At2g40820.1 68415.m05038 proline-rich family protein contains pr... 28 5.4
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 28 5.4
At5g55500.1 68418.m06912 beta-(1,2)-xylosyltransferase (XYLT) id... 27 7.2
At3g61360.1 68416.m06866 pentatricopeptide (PPR) repeat-containi... 27 7.2
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 27 7.2
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 27 7.2
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 27 9.5
At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger) fa... 27 9.5
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 179 bits (436), Expect = 1e-45
Identities = 79/87 (90%), Positives = 85/87 (97%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVY+NEASGGKYVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 INVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAEL+DSVLDVVRKEAE CDCL+ F
Sbjct: 107 TEGAELIDSVLDVVRKEAENCDCLQGF 133
Score = 81.8 bits (193), Expect = 3e-16
Identities = 36/45 (80%), Positives = 38/45 (84%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREI+HIQ GQCGNQIGAKFWEVI EHGID TG GD+DLQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLE 45
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 179 bits (436), Expect = 1e-45
Identities = 78/87 (89%), Positives = 85/87 (97%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEASGG+YVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHY
Sbjct: 48 INVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 107
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAEL+D+VLDVVRKEAE CDCL+ F
Sbjct: 108 TEGAELIDAVLDVVRKEAENCDCLQGF 134
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/46 (82%), Positives = 42/46 (91%), Gaps = 1/46 (2%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD-SDLQLE 254
MREI+HIQ GQCGNQIG+KFWEVI DEHGID+TG YSGD +DLQLE
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLE 46
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 178 bits (433), Expect = 3e-45
Identities = 77/87 (88%), Positives = 85/87 (97%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEASGG+YVPRAV++DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHY
Sbjct: 48 INVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHY 107
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAEL+D+VLDVVRKEAE CDCL+ F
Sbjct: 108 TEGAELIDAVLDVVRKEAENCDCLQGF 134
Score = 83.8 bits (198), Expect = 8e-17
Identities = 36/46 (78%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS-DLQLE 254
MREI+H+Q GQCGNQIG+KFWEVI DEHG+D TG Y+GDS DLQLE
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLE 46
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 175 bits (427), Expect = 1e-44
Identities = 77/87 (88%), Positives = 84/87 (96%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
+NVYYNEAS G+YVPRAV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 VNVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAEL+DSVLDVVRKEAE CDCL+ F
Sbjct: 107 TEGAELIDSVLDVVRKEAENCDCLQGF 133
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREI+HIQ GQCGNQIG+KFWEV++ EHGID TG Y GDS+LQLE
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLE 45
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 174 bits (423), Expect = 4e-44
Identities = 76/87 (87%), Positives = 84/87 (96%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
+NVYYNEAS G++VPRAV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 VNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAEL+DSVLDVVRKEAE CDCL+ F
Sbjct: 107 TEGAELIDSVLDVVRKEAENCDCLQGF 133
Score = 84.2 bits (199), Expect = 6e-17
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREI+HIQ GQCGNQIGAKFWEV+ EHGID+TG Y G++DLQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLE 45
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 173 bits (421), Expect = 7e-44
Identities = 77/87 (88%), Positives = 84/87 (96%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
I+VY+NEASGGKYVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 IDVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAEL+DSVLDVVRKEAE DCL+ F
Sbjct: 107 TEGAELIDSVLDVVRKEAENSDCLQGF 133
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/45 (84%), Positives = 39/45 (86%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDS LQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLE 45
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 173 bits (420), Expect = 1e-43
Identities = 74/87 (85%), Positives = 84/87 (96%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
+NVYYNEAS G+YVPRA+++DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 VNVYYNEASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAEL+D+VLDVVRKEAE CDCL+ F
Sbjct: 107 TEGAELIDAVLDVVRKEAENCDCLQGF 133
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREI+HIQ GQCGNQIG+KFWEV+ DEHGID TG Y G+SDLQLE
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLE 45
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 171 bits (416), Expect = 3e-43
Identities = 75/87 (86%), Positives = 83/87 (95%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEAS G++VPRAV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 INVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAEL+DSVLDVVRKEAE CDCL+ F
Sbjct: 107 TEGAELIDSVLDVVRKEAENCDCLQGF 133
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLE 45
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 171 bits (416), Expect = 3e-43
Identities = 75/87 (86%), Positives = 83/87 (95%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEAS G++VPRAV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 INVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAEL+DSVLDVVRKEAE CDCL+ F
Sbjct: 107 TEGAELIDSVLDVVRKEAENCDCLQGF 133
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLE 45
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 98.7 bits (235), Expect = 3e-21
Identities = 43/88 (48%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
+ N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 48 AFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E+VD LD VRK A+ C L+ F
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGF 135
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 239
MREI+ I GQ G Q+G WE+ EHGI G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT 40
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 98.7 bits (235), Expect = 3e-21
Identities = 43/88 (48%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
+ N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 48 AFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E+VD LD VRK A+ C L+ F
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGF 135
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 239
MREI+ I GQ G Q+G WE+ EHGI G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT 40
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 97.9 bits (233), Expect = 4e-21
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
+ N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 48 AFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E+VD LD +RK A+ C L+ F
Sbjct: 108 YTIGKEIVDLCLDRIRKLADNCTGLQGF 135
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 236
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 97.9 bits (233), Expect = 4e-21
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
+ N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 48 AFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E+VD LD +RK A+ C L+ F
Sbjct: 108 YTIGKEIVDLCLDRIRKLADNCTGLQGF 135
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 236
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 97.9 bits (233), Expect = 4e-21
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
+ N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 48 AFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E+VD LD +RK A+ C L+ F
Sbjct: 108 YTIGKEIVDLCLDRIRKLADNCTGLQGF 135
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 236
MRE + I GQ G Q+G WE+ EHGI G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 97.9 bits (233), Expect = 4e-21
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
+ N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 48 AFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E+VD LD +RK A+ C L+ F
Sbjct: 108 YTIGKEIVDLCLDRIRKLADNCTGLQGF 135
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 236
MRE + I GQ G Q+G WE+ EHGI G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 95.9 bits (228), Expect = 2e-20
Identities = 40/88 (45%), Positives = 62/88 (70%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
+ N +++E S G++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 48 AFNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E+VD+ L+ +RK A+ C L+ F
Sbjct: 108 YTVGREIVDTCLERLRKLADNCTGLQGF 135
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 239
MREI+ I GQ G Q+G WE+ EHGI G DS
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDS 40
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.5 bits (165), Expect = 8e-13
Identities = 29/88 (32%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Frame = +2
Query: 260 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGH 433
+V++ +A Y+PRA+++DLEP ++ +++G + ++ +N GAGNNWA G
Sbjct: 49 DVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG- 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
Y +G + + ++D++ +EA+G D L F
Sbjct: 108 YHQGKGVEEEIMDMIDREADGSDSLEGF 135
Score = 48.0 bits (109), Expect = 5e-06
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 221
REI+ +Q GQCGNQIG +FW+ + EHGI G
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDG 35
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/88 (32%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Frame = +2
Query: 260 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGH 433
+V++ +A Y+PRA+++DLEP ++ +++G + ++ +N GAGNNWA G
Sbjct: 49 DVFFYQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG- 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
Y +G + + ++D++ +EA+G D L F
Sbjct: 108 YHQGKGVEEEIMDMIDREADGSDSLEGF 135
Score = 48.0 bits (109), Expect = 5e-06
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 221
REI+ +Q GQCGNQIG +FW+ + EHGI G
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDG 35
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 452 LVDSVLDVVRKEAEGCDCLRVF 517
+++SV VVRKEAE C+CL+VF
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFW 182
MREIV IQ G+ N +G+ FW
Sbjct: 1 MREIVTIQVGEFANFVGSHFW 21
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -3
Query: 470 PVPNQPVQPPLCNXLSP-SYSPPQTVRRRSCPVGRFAQ---TARNGRSPWFQAQGPPSQL 303
P P+ P+ P L P S +PP S P+ T N RSP QGPP+
Sbjct: 54 PPPSSPLPPSLPPPSPPGSLTPPLPQPSPSAPITPSPPSPTTPSNPRSPPSPNQGPPNTP 113
Query: 302 AGRT 291
+G T
Sbjct: 114 SGST 117
>At2g26850.1 68415.m03221 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 182 PELCSDLIPALTRLDVDDFPHDCTKNLEPP 93
P+L S ++ ++ LD+ D P DC L PP
Sbjct: 50 PDLASPVLGKMSILDLPDLPLDCILELLPP 79
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 126 EIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLEASMSTI 272
+I++ A + G+ GA FWEVIS + ++G S + L ST+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVIS-----EGMSNFAGPSSIILSDKSSTV 389
>At2g40820.1 68415.m05038 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 903
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 473 HPVPNQPVQPPLCNXLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQLA 300
+P P QP PP+ + P+Y P++V S P T + P++ PP Q A
Sbjct: 760 YPPPMQPPPPPMNSGYMPTYI-PKSVNDSSMPNPPMNNTNPQMQQPYYP---PPMQPA 813
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 470 PVPNQPVQPPLCNXLSPSYSPP 405
PV +P PP SPSYSPP
Sbjct: 169 PVYTKPTLPPPVYKKSPSYSPP 190
>At5g55500.1 68418.m06912 beta-(1,2)-xylosyltransferase (XYLT)
identical to SP|Q9LDH0
Length = 534
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Frame = -3
Query: 281 KLRYSRH*CFKLQVGVAAVSTRGVNAVLVRDYFPE------LCSDLIPALTRLDVDDFPH 120
+L + RH F G +AVS R VN ++ +Y E DL+ ++ +D +DF
Sbjct: 171 RLGFKRHRRFGGGEGGSAVSRRLVNDEMLNEYMQEGGIDRHTMRDLVASIRAVDTNDFV- 229
Query: 119 DCTKNLEPP 93
C + +E P
Sbjct: 230 -CEEWVEEP 237
>At3g61360.1 68416.m06866 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 498
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -3
Query: 473 HPVPNQPVQPPLCNXLSPSYSPPQTVRRRSCPVGRFAQTARNG 345
HP PN P+QP L + S P+ V S +GR NG
Sbjct: 44 HPFPNHPIQPILAKHIPLSSLSPEFV---SEVLGRLFAAHSNG 83
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 411 PAPDCPKTKLSGRKICPNGPERTESMVPG-SRSTITARGT 295
PAP P L ICP+G + M SRS + GT
Sbjct: 129 PAPTSPANVLPTGNICPSGKIQITGMTQSRSRSDVLGSGT 168
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 470 PVPNQPVQPPLCNXLSPSYSPPQTVRRRSCPVG 372
P P+ PP+ + P++SPP T P+G
Sbjct: 619 PPPSHSPPPPVYSPPPPTFSPPPTHNTNQPPMG 651
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 470 PVPNQPVQPPLCNXLSPSYSPPQTVRRRSCP 378
P+P P PPL +P PP +RRR+ P
Sbjct: 28 PLPPPP-PPPLMRRRAPPPPPPPLMRRRAPP 57
>At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger)
family protein similar to C-terminal zinc-finger
[Glycine max] GI:558543; contains Pfam profile: PF00097
zinc finger, C3HC4 type (RING finger)
Length = 486
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3
Query: 452 VQPPLCNXLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQL 303
+Q P N S Y PPQ + + +G TA N P+ + PPS L
Sbjct: 50 LQEPYDNN-SMFYGPPQYHHQHASNLGSGMSTAPNFYVPYVNYEAPPSFL 98
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,691,265
Number of Sequences: 28952
Number of extensions: 302275
Number of successful extensions: 1050
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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