Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0007
(618 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47515| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 29 2.3
SB_17452| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 29 2.3
SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_54554| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 7.0
SB_52808| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 7.0
SB_41510| Best HMM Match : Minor_tail_Z (HMM E-Value=3.5) 28 7.0
SB_40055| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 7.0
SB_36653| Best HMM Match : ACBP (HMM E-Value=3.6) 28 7.0
SB_25596| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_20592| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_14108| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 7.0
SB_9519| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 7.0
SB_5126| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_2129| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_54746| Best HMM Match : RVT_1 (HMM E-Value=8.4e-11) 28 7.0
SB_36062| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 7.0
SB_32612| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 7.0
SB_5327| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 7.0
SB_36229| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 27 9.2
>SB_47515| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 189
Score = 29.5 bits (63), Expect = 2.3
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +1
Query: 325 DSQPQEKVCSTTKDVFW-DR-SKIRLLLKLCLEDRFKNINKQKTLWHDIASHVGTTADEC 498
DS E ++ W DR + +L + L + K +T W A HV +D
Sbjct: 15 DSSFMEDAILNILNIRWQDRITNTEVLERANLPSVITTMRKAQTRW---AGHVCRMSDSR 71
Query: 499 CKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
K + GEL GS K G K+ C+ H+K+
Sbjct: 72 IPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 105
>SB_17452| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 189
Score = 29.5 bits (63), Expect = 2.3
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +1
Query: 325 DSQPQEKVCSTTKDVFW-DR-SKIRLLLKLCLEDRFKNINKQKTLWHDIASHVGTTADEC 498
DS E ++ W DR + +L + L + K +T W A HV +D
Sbjct: 15 DSSFMEDAILNILNIRWQDRITNTEVLERANLPSVITTMRKAQTRW---AGHVCRMSDSR 71
Query: 499 CKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
K + GEL GS K G K+ C+ H+K+
Sbjct: 72 IPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 105
>SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2346
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 262 ETGENRQFIHINEPPIIVQEHDSQPQE 342
E GE Q HIN I+V E PQE
Sbjct: 1139 EVGEELQIFHINPGSIVVTELPPSPQE 1165
>SB_54554| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 137
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 1 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 53
>SB_52808| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 166
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 30 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 82
>SB_41510| Best HMM Match : Minor_tail_Z (HMM E-Value=3.5)
Length = 208
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 141 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 193
>SB_40055| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 303
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 167 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 219
>SB_36653| Best HMM Match : ACBP (HMM E-Value=3.6)
Length = 206
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 424 FKNINKQKTLWHDIASHVGTTADECCKK 507
FK+ NK++ W +A G + DE +K
Sbjct: 39 FKDKNKKENAWKQVAEQAGCSVDEAKRK 66
>SB_25596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 424 FKNINKQKTLWHDIASHVGTTADECCKK 507
FK+ NK++ W +A G + DE +K
Sbjct: 39 FKDKNKKENAWKQVAEQAGCSVDEAKRK 66
>SB_20592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 1 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 53
>SB_14108| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 404
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 268 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 320
>SB_9519| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 299
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 163 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 215
>SB_5126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 222 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 274
>SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1319
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 1183 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 1235
>SB_2129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 30 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 82
>SB_54746| Best HMM Match : RVT_1 (HMM E-Value=8.4e-11)
Length = 959
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 887 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 939
>SB_36062| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 166
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 30 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 82
>SB_32612| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 166
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 30 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 82
>SB_5327| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 328
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 192 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 244
>SB_36229| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 269
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIG*AKKSNGCL*LHVKE 600
+ K +T W A HV +D K + GEL GS K G K+ C+ H+K+
Sbjct: 133 MRKVQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKD 185
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,634,508
Number of Sequences: 59808
Number of extensions: 331078
Number of successful extensions: 801
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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