Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0006
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC046098-1|AAH46098.1| 450|Homo sapiens CBF1 interacting corepr... 30 9.1
BC038987-1|AAH38987.1| 289|Homo sapiens Similar to RIKEN cDNA 1... 30 9.1
BC031018-1|AAH31018.1| 426|Homo sapiens CIR protein protein. 30 9.1
BC021175-1|AAH21175.1| 227|Homo sapiens CIR protein protein. 30 9.1
AY894575-1|AAX85114.1| 1214|Homo sapiens NBPF1 protein. 30 9.1
AF379626-1|AAO15394.1| 502|Homo sapiens AC3 protein. 30 9.1
AF379622-1|AAO15391.1| 358|Homo sapiens AB18 protein. 30 9.1
AF098297-1|AAD05243.1| 450|Homo sapiens CBF1 interacting corepr... 30 9.1
AC018470-1|AAY24216.1| 450|Homo sapiens unknown protein. 30 9.1
>BC046098-1|AAH46098.1| 450|Homo sapiens CBF1 interacting
corepressor protein.
Length = 450
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/69 (20%), Positives = 34/69 (49%)
Frame = +2
Query: 368 VHTMSLPRASAPPGLRPNEIIDQFHVTNFNVRLEIESEXLTGELKAGKQVPYLT*REPSI 547
++ S+P + P + P+E+I + + F ++ + LT + + V +P +
Sbjct: 151 INASSVPTDGSGPSMHPSELIAEMRNSGFALKRNVLGRNLTANDPSQEYVASEGEEDPEV 210
Query: 548 DSLKATSTE 574
+ LK+ +T+
Sbjct: 211 EFLKSLTTK 219
>BC038987-1|AAH38987.1| 289|Homo sapiens Similar to RIKEN cDNA
1700023B02 gene protein.
Length = 289
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/69 (20%), Positives = 34/69 (49%)
Frame = +2
Query: 368 VHTMSLPRASAPPGLRPNEIIDQFHVTNFNVRLEIESEXLTGELKAGKQVPYLT*REPSI 547
++ S+P + P + P+E+I + + F ++ + LT + + V +P +
Sbjct: 151 INASSVPTDGSGPSMHPSELIAEMRNSGFALKRNVLGRNLTANDPSQEYVASEGEEDPEV 210
Query: 548 DSLKATSTE 574
+ LK+ +T+
Sbjct: 211 EFLKSLTTK 219
>BC031018-1|AAH31018.1| 426|Homo sapiens CIR protein protein.
Length = 426
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/69 (20%), Positives = 34/69 (49%)
Frame = +2
Query: 368 VHTMSLPRASAPPGLRPNEIIDQFHVTNFNVRLEIESEXLTGELKAGKQVPYLT*REPSI 547
++ S+P + P + P+E+I + + F ++ + LT + + V +P +
Sbjct: 151 INASSVPTDGSGPSMHPSELIAEMRNSGFALKRNVLGRNLTANDPSQEYVASEGEEDPEV 210
Query: 548 DSLKATSTE 574
+ LK+ +T+
Sbjct: 211 EFLKSLTTK 219
>BC021175-1|AAH21175.1| 227|Homo sapiens CIR protein protein.
Length = 227
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/69 (20%), Positives = 34/69 (49%)
Frame = +2
Query: 368 VHTMSLPRASAPPGLRPNEIIDQFHVTNFNVRLEIESEXLTGELKAGKQVPYLT*REPSI 547
++ S+P + P + P+E+I + + F ++ + LT + + V +P +
Sbjct: 151 INASSVPTDGSGPSMHPSELIAEMRNSGFALKRNVLGRNLTANDPSQEYVASEGEEDPEV 210
Query: 548 DSLKATSTE 574
+ LK+ +T+
Sbjct: 211 EFLKSLTTK 219
>AY894575-1|AAX85114.1| 1214|Homo sapiens NBPF1 protein.
Length = 1214
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 397 RSSGQRHRVDPVSVLEDSVDQLRLPVDVRFDVLDHYTHYR 278
R SG V+ VL+DS+D+ + F++ D + HYR
Sbjct: 1134 RLSGMLMEVEEPEVLQDSLDRCYSTPSMYFELPDSFQHYR 1173
>AF379626-1|AAO15394.1| 502|Homo sapiens AC3 protein.
Length = 502
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 397 RSSGQRHRVDPVSVLEDSVDQLRLPVDVRFDVLDHYTHYR 278
R SG V+ VL+DS+D+ + F++ D + HYR
Sbjct: 422 RLSGMLMEVEEPEVLQDSLDRCYSTPSMYFELPDSFQHYR 461
>AF379622-1|AAO15391.1| 358|Homo sapiens AB18 protein.
Length = 358
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 397 RSSGQRHRVDPVSVLEDSVDQLRLPVDVRFDVLDHYTHYR 278
R SG V+ VL+DS+D+ + F++ D + HYR
Sbjct: 278 RLSGMLMEVEEPEVLQDSLDRCYSTPSMYFELPDSFQHYR 317
>AF098297-1|AAD05243.1| 450|Homo sapiens CBF1 interacting
corepressor CIR protein.
Length = 450
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/69 (20%), Positives = 34/69 (49%)
Frame = +2
Query: 368 VHTMSLPRASAPPGLRPNEIIDQFHVTNFNVRLEIESEXLTGELKAGKQVPYLT*REPSI 547
++ S+P + P + P+E+I + + F ++ + LT + + V +P +
Sbjct: 151 INASSVPTDGSGPSMHPSELIAEMRNSGFALKRNVLGRNLTANDPSQEYVASEGEEDPEV 210
Query: 548 DSLKATSTE 574
+ LK+ +T+
Sbjct: 211 EFLKSLTTK 219
>AC018470-1|AAY24216.1| 450|Homo sapiens unknown protein.
Length = 450
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/69 (20%), Positives = 34/69 (49%)
Frame = +2
Query: 368 VHTMSLPRASAPPGLRPNEIIDQFHVTNFNVRLEIESEXLTGELKAGKQVPYLT*REPSI 547
++ S+P + P + P+E+I + + F ++ + LT + + V +P +
Sbjct: 151 INASSVPTDGSGPSMHPSELIAEMRNSGFALKRNVLGRNLTANDPSQEYVASEGEEDPEV 210
Query: 548 DSLKATSTE 574
+ LK+ +T+
Sbjct: 211 EFLKSLTTK 219
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,237,417
Number of Sequences: 237096
Number of extensions: 1628054
Number of successful extensions: 4229
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4229
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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