Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0004
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    29   4.8  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    29   4.8  
BT003575-1|AAO39579.1|  994|Drosophila melanogaster LD33058p pro...    29   6.3  
AE014297-1603|AAF54881.2| 1013|Drosophila melanogaster CG31342-P...    29   6.3  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 386 PRASAPPGPTPQRDYRPVPRTP 451
           PR  APP P P   Y+P P +P
Sbjct: 330 PRPPAPPAPAPGPTYQPRPPSP 351



 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 386 PRASAPPGPTPQRDYRPVPRTP 451
           PR  APP P P   Y+P P  P
Sbjct: 314 PRPPAPPAPAPGPTYQPRPPAP 335


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 386 PRASAPPGPTPQRDYRPVPRTP 451
           PR  APP P P   Y+P P +P
Sbjct: 330 PRPPAPPAPAPGPTYQPRPPSP 351



 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 386 PRASAPPGPTPQRDYRPVPRTP 451
           PR  APP P P   Y+P P  P
Sbjct: 314 PRPPAPPAPAPGPTYQPRPPAP 335


>BT003575-1|AAO39579.1|  994|Drosophila melanogaster LD33058p
           protein.
          Length = 994

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 368 VXTMXLPRASAPPGPTPQRDYRPVPRTP 451
           V  +  P   APP P P+    PVP TP
Sbjct: 204 VERVVAPSHQAPPAPPPEPPTSPVPTTP 231


>AE014297-1603|AAF54881.2| 1013|Drosophila melanogaster CG31342-PA
           protein.
          Length = 1013

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 368 VXTMXLPRASAPPGPTPQRDYRPVPRTP 451
           V  +  P   APP P P+    PVP TP
Sbjct: 204 VERVVAPSHQAPPAPPPEPPTSPVPTTP 231


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,584,210
Number of Sequences: 53049
Number of extensions: 264190
Number of successful extensions: 977
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)