Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0382.Seq
         (790 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2486|AAM70880.1|  420|Drosophila melanogaster CG4847-PD...    32   1.0  
AY122134-1|AAM52646.1|  966|Drosophila melanogaster GH27779p pro...    29   5.5  
AE014134-308|AAF51329.2|  966|Drosophila melanogaster CG31663-PA...    29   5.5  

>AE013599-2486|AAM70880.1|  420|Drosophila melanogaster CG4847-PD,
           isoform D protein.
          Length = 420

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 172 WSINESLLTTLPLLRINVSIIAQKGLGVSPLGASVGADLGG 50
           W I+  LL  LPLL   V++++ +G G    G   G  LGG
Sbjct: 27  WQISMKLLLVLPLL---VAVVSGQGFGGGGFGGGFGGGLGG 64


>AY122134-1|AAM52646.1|  966|Drosophila melanogaster GH27779p
           protein.
          Length = 966

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +2

Query: 281 AARAICSNCADEKITASFFPALAAGTFSVGNGSGS-TGAFACLRNGRAD 424
           AA   CS  A + + A+    L    FS+G GSGS TG     + G  D
Sbjct: 644 AAATYCSILAPKSLLATLIGVLGMAHFSLGRGSGSFTGGLLIGQFGTRD 692


>AE014134-308|AAF51329.2|  966|Drosophila melanogaster CG31663-PA
           protein.
          Length = 966

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +2

Query: 281 AARAICSNCADEKITASFFPALAAGTFSVGNGSGS-TGAFACLRNGRAD 424
           AA   CS  A + + A+    L    FS+G GSGS TG     + G  D
Sbjct: 644 AAATYCSILAPKSLLATLIGVLGMAHFSLGRGSGSFTGGLLIGQFGTRD 692


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,143,853
Number of Sequences: 53049
Number of extensions: 860839
Number of successful extensions: 2464
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2463
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)