BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS302B07f (521 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 1e-40 SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 5e-39 SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 153 6e-38 SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 147 6e-36 SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16 SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 33 0.11 SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3 SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8 SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8 SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 28 4.1 SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1 SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1 SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 4.1 SB_17329| Best HMM Match : S-antigen (HMM E-Value=0.31) 27 7.1 SB_33946| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1 SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14) 27 7.1 SB_44299| Best HMM Match : IWS1_C (HMM E-Value=3.9) 27 9.4 SB_33836| Best HMM Match : PsbI (HMM E-Value=2) 27 9.4 SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4 SB_5020| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4 >SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 219 Score = 163 bits (395), Expect = 1e-40 Identities = 80/133 (60%), Positives = 104/133 (78%) Frame = +1 Query: 118 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 297 M V +E L+ AKL+EQ +RYD+MA MKEV+E +LS EERNLLSV+YKN+VG RRSS Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLSVSYKNIVGQRRSS 139 Query: 298 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFY 477 WRVISSIE+KT S + K+Y+ +EKEL+++C +VLG+L++ LIP A + E+KVFY Sbjct: 140 WRVISSIEEKTAESS-SLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVFY 197 Query: 478 LKMKGDYYRYLAE 516 K+KGDYYRYLAE Sbjct: 198 FKLKGDYYRYLAE 210 >SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 309 Score = 157 bits (381), Expect = 5e-39 Identities = 78/111 (70%), Positives = 85/111 (76%) Frame = +1 Query: 187 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 366 MA AMKE TE L EERNLLSVAYKNVVGA+RSSWRVISSIEQK EGSERK+Q + Sbjct: 1 MAKAMKEATEISETLEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLEGSERKKQNTET 60 Query: 367 YRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEV 519 YR +E EL E+C VL LL+ LIP A + ESKVFYLKMKGDYYRY EV Sbjct: 61 YRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGDYYRYEGEV 111 >SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) Length = 248 Score = 153 bits (372), Expect = 6e-38 Identities = 79/141 (56%), Positives = 98/141 (69%), Gaps = 3/141 (2%) Frame = +1 Query: 106 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGA 285 P+ +EEL+ AK+AEQAERYDDM AM VT+ G L++EERNLLSVAYKNVVGA Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDEERNLLSVAYKNVVGA 62 Query: 286 RRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKAS---N 456 RRSSWRVISS+EQK E + K+YR + EL C +VL +L+ +L+ N Sbjct: 63 RRSSWRVISSMEQK--APEEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDIN 120 Query: 457 PESKVFYLKMKGDYYRYLAEV 519 E+KVFYLKM+GDY+RYL EV Sbjct: 121 TEAKVFYLKMRGDYHRYLVEV 141 >SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) Length = 251 Score = 147 bits (356), Expect = 6e-36 Identities = 75/123 (60%), Positives = 93/123 (75%), Gaps = 3/123 (2%) Frame = +1 Query: 127 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 306 DKEE V AKLAEQAERYDDM +MKEV + G ELS E+RNLLSVAYKNV+GARR+SWR+ Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTEDRNLLSVAYKNVIGARRASWRI 62 Query: 307 ISSIEQKTE--GSE-RKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFY 477 I+SIEQK E G + K +M + YR +E+EL+ IC ++L LLD LI + + ESKVFY Sbjct: 63 ITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEESKVFY 122 Query: 478 LKM 486 K+ Sbjct: 123 NKI 125 >SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 607 Score = 83.0 bits (196), Expect = 1e-16 Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 2/102 (1%) Frame = +1 Query: 118 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 297 M + ELVQ AKLAEQ ER++D+ MK+ E L+ E RNLLSV YKNVVG++R + Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKEHRNLLSVGYKNVVGSKRFA 245 Query: 298 WRVISSIEQKTEGSERKQQMAK--EYRVKVEKELREICYDVL 417 WR + ++ R Q+ +Y+ K+E EL+ +C ++L Sbjct: 246 WRHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287 >SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) Length = 442 Score = 33.5 bits (73), Expect = 0.11 Identities = 23/86 (26%), Positives = 40/86 (46%) Frame = +1 Query: 130 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 309 KE+ AK ++ ER + A K+ E + EE++ L K R+ + Sbjct: 339 KEKERLEAKQKKEQERLEKQAEKEKKEKERLEKKQREEKDRLEKKEKKEEEKRKKEEEIN 398 Query: 310 SSIEQKTEGSERKQQMAKEYRVKVEK 387 + IE+K + E+K+Q +E K E+ Sbjct: 399 AKIEEKKKREEKKKQEEEEKMKKKEQ 424 >SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3367 Score = 29.9 bits (64), Expect = 1.3 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 12/121 (9%) Frame = +1 Query: 115 TMSVDKEELVQRAKLAEQAERY---DDMAAAMKEVTETGVELSNE-ERNLLSVAYKNVVG 282 ++S+ +EL + LA Q + D A K+VT ++ + E R + + Sbjct: 3123 SLSLKSQELEAKNALANQKLKQMVKDQQEAEKKKVTSMEIQTTIETHRKQTIIEMVSCAA 3182 Query: 283 ARRSSWR--------VISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHL 438 R S++ + SS++++T+ + KQQ + +VE + E V G+ +HL Sbjct: 3183 CLRKSYQESAFLDLLITSSLQKQTKQIKEKQQAVMKDLAQVEPAVDEARQAVKGIKKQHL 3242 Query: 439 I 441 + Sbjct: 3243 V 3243 >SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2202 Score = 29.5 bits (63), Expect = 1.8 Identities = 22/100 (22%), Positives = 52/100 (52%), Gaps = 3/100 (3%) Frame = +1 Query: 106 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLL-SVAYKNVVG 282 PSS S DK+E+ +++ +++++ ++A K + E ++S + S+ K + Sbjct: 1066 PSSRSSHDKDEISEKSNPSDKSD--VEVARKNKHMPEALYKISETISGMNDSITLKEPLK 1123 Query: 283 ARRSSWR--VISSIEQKTEGSERKQQMAKEYRVKVEKELR 396 A+ R ++ + E +R+ + K++R++ EK+ R Sbjct: 1124 AKDGDGRNKEEQELKDRMENEKREDTIRKQHRLQWEKKAR 1163 >SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1234 Score = 29.5 bits (63), Expect = 1.8 Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 6/115 (5%) Frame = +1 Query: 130 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGAR------R 291 ++ L + K A +R +A+A+ + + + LS K VV + + Sbjct: 279 QKTLSEMFKQAVTEDRPKMLASAITKALNQDIHSPSALNLPLSTPAKQVVKTKWDRIREK 338 Query: 292 SSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 456 W ++S E+ +ER++Q E +VK E++ R+ ++ + HL K SN Sbjct: 339 HQWNLLSEDEKNKIKAERRKQKRLELKVKREEKERKRLEELKRVSFAHLGMKLSN 393 >SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) Length = 512 Score = 28.3 bits (60), Expect = 4.1 Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%) Frame = +1 Query: 148 RAKLAEQAERYDDMAAAM-KEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQ 324 + K+ +++E+YD + + KE T+ G + E + N AR + ++ + Sbjct: 13 KRKIFKKSEKYDRLEEPLEKEGTDGGEIEAEAEVEPHTEEEANYNEARSENCEKNNNNDS 72 Query: 325 KTEGSERKQQMAKEYRVKVEKELRE 399 T ++ +Q KE+ V +EK+L++ Sbjct: 73 STPDAKSQQADIKEWIVSLEKQLKD 97 >SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 676 Score = 28.3 bits (60), Expect = 4.1 Identities = 26/101 (25%), Positives = 48/101 (47%) Frame = +1 Query: 97 SSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNV 276 + L S+ +D+E R +++++ RY + A MK V E + ++E + + Sbjct: 537 TGLDSNLSKLDQEVRGLREEISQEESRYHYLHAMMK-VLEIQQKRIDDEMKAYTAQDQ-- 593 Query: 277 VGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELRE 399 R+ SWR EQ T + ++ + K R K +K +RE Sbjct: 594 -ADRKKSWR-----EQYTRKIQEQENLGKSLREK-QKAVRE 627 >SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1126 Score = 28.3 bits (60), Expect = 4.1 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +1 Query: 301 RVISSIEQKTEGSERKQQMAKEYRVKVEKELREIC 405 R++ IE+K E E ++ AKE + + E+E + IC Sbjct: 919 RIMKEIEEK-EKKEEAERKAKEEKEREERERKRIC 952 >SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) Length = 783 Score = 28.3 bits (60), Expect = 4.1 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = +1 Query: 346 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPK 447 K++M ++Y K+EKE+ Y+++ L K ++ K Sbjct: 292 KEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGK 325 >SB_17329| Best HMM Match : S-antigen (HMM E-Value=0.31) Length = 646 Score = 27.5 bits (58), Expect = 7.1 Identities = 34/128 (26%), Positives = 51/128 (39%) Frame = +1 Query: 7 IVQRKRKTDIVLKFAGSNTFFPFRQGHQ*ISSLPSSTMSVDKEELVQRAKLAEQAERYDD 186 +V++KR TD V P R + S+ + D EEL + KL E+A ++ Sbjct: 302 VVKKKRNTDGVK--------IPLRTRASTLDSVGTGMEQEDFEELSDQEKLKEEANGNEE 353 Query: 187 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 366 +EVT EE Y V ++S +V+S G +K KE Sbjct: 354 ----SEEVTGEKTAEDAEETRPKQSQYNKVKKRAKASKQVVSQTVIVKGGPNKKALKEKE 409 Query: 367 YRVKVEKE 390 + EKE Sbjct: 410 KSTE-EKE 416 >SB_33946| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 50 Score = 27.5 bits (58), Expect = 7.1 Identities = 10/32 (31%), Positives = 18/32 (56%) Frame = +1 Query: 406 YDVLGLLDKHLIPKASNPESKVFYLKMKGDYY 501 YD ++ HL+P A +++ +K+ DYY Sbjct: 6 YDSNTVVSHHLLPSAQTRYIRIYPVKVNSDYY 37 >SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14) Length = 708 Score = 27.5 bits (58), Expect = 7.1 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +1 Query: 175 RYDDMAAAMKEVTETGVELSNEERNLLSV 261 +YD++ AA+K+ T TG+ S + L V Sbjct: 57 KYDNLLAAVKDATNTGIRESGIDARLCDV 85 Score = 27.5 bits (58), Expect = 7.1 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +1 Query: 175 RYDDMAAAMKEVTETGVELSNEERNLLSV 261 +YD++ AA+K+ T TG+ S + L V Sbjct: 163 KYDNLLAAVKDATNTGIRESGIDARLCDV 191 >SB_44299| Best HMM Match : IWS1_C (HMM E-Value=3.9) Length = 454 Score = 27.1 bits (57), Expect = 9.4 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 1/90 (1%) Frame = +1 Query: 238 EERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVL 417 +ER + +V ++ ARRSS R + +++ TE + + E +V + R I Sbjct: 310 DERLVAAVVMQSRSEARRSSRRTMQTVQDTTENTLDRNN--NEIKVTKTQPSRRISVSDP 367 Query: 418 GLLDKH-LIPKASNPESKVFYLKMKGDYYR 504 LL + L+ + ++P + K + YR Sbjct: 368 KLLPRRPLVEETTSPSPNSLIEEAKTNKYR 397 >SB_33836| Best HMM Match : PsbI (HMM E-Value=2) Length = 241 Score = 27.1 bits (57), Expect = 9.4 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%) Frame = +1 Query: 142 VQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV-ISSI 318 + R +L++ Y MAA + E TE E + N+L+ + V A W + + Sbjct: 152 ISRDQLSQLLLVYVGMAADIMEFTEIIKEDEIRKVNMLN--NNHFVNAVILFWSMSLFQF 209 Query: 319 EQKTEGSERKQQMAKEYRVKVEKELRE 399 G+ER Q ++ + K+E+EL + Sbjct: 210 TLTISGTERTAQRLEKEKAKIEEELHK 236 >SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 994 Score = 27.1 bits (57), Expect = 9.4 Identities = 15/51 (29%), Positives = 27/51 (52%) Frame = +1 Query: 94 ISSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEER 246 +S LPS+ +E+V KLAE+ E ++++ T+ E + EE+ Sbjct: 643 VSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVSPVKPLSTKESKENALEEK 693 >SB_5020| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 687 Score = 27.1 bits (57), Expect = 9.4 Identities = 9/43 (20%), Positives = 28/43 (65%), Gaps = 4/43 (9%) Frame = +1 Query: 310 SSIEQKTEGSERKQQMAKEYRVKVE----KELREICYDVLGLL 426 +S+ +K E ++ + Y++K++ K+++++C+ V+G++ Sbjct: 20 NSLREKVERKTISNRITRNYKMKLQPMEIKDMKKLCFAVIGVI 62 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,357,177 Number of Sequences: 59808 Number of extensions: 285918 Number of successful extensions: 913 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 852 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 909 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1172759136 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -