BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS302A11f (521 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF132147-1|AAD33594.1| 414|Drosophila melanogaster DNA repair p... 87 1e-17 AE014135-61|AAN06526.1| 343|Drosophila melanogaster CG1836-PB, ... 87 1e-17 AE014135-60|AAF59352.1| 414|Drosophila melanogaster CG1836-PA, ... 87 1e-17 AF136606-1|AAD33695.1| 414|Drosophila melanogaster DHR23 protein. 85 4e-17 AY089339-1|AAL90077.1| 290|Drosophila melanogaster AT15685p pro... 73 2e-13 AE014297-3457|AAF56234.1| 290|Drosophila melanogaster CG10694-P... 73 2e-13 BT023777-1|AAZ41786.1| 905|Drosophila melanogaster LD29489p pro... 32 0.54 AY119467-1|AAM50121.1| 581|Drosophila melanogaster GH04034p pro... 32 0.54 AE014297-544|AAF54074.3| 905|Drosophila melanogaster CG1965-PA ... 32 0.54 BT001611-1|AAN71366.1| 697|Drosophila melanogaster RE32656p pro... 30 1.7 BT030410-1|ABO52830.1| 592|Drosophila melanogaster IP08946p pro... 30 2.2 AE014297-2368|AAF55432.1| 277|Drosophila melanogaster CG5829-PA... 30 2.2 BT015224-1|AAT94453.1| 697|Drosophila melanogaster RE33368p pro... 29 5.1 AE014297-3614|AAN14015.2| 697|Drosophila melanogaster CG13627-P... 29 5.1 AE014297-3613|AAF56325.1| 697|Drosophila melanogaster CG13627-P... 29 5.1 >AF132147-1|AAD33594.1| 414|Drosophila melanogaster DNA repair protein Rad23 protein. Length = 414 Score = 87.0 bits (206), Expect = 1e-17 Identities = 45/71 (63%), Positives = 57/71 (80%) Frame = -1 Query: 359 AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLA 180 +G A+D D++QP LG + I+++ QDK+AIERLKALGFPE +V+QAYFACEKNE A Sbjct: 348 SGSAADNE--DLEQP-LGV-STIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQA 403 Query: 179 ANFLLSQNFDD 147 ANFLLS +FDD Sbjct: 404 ANFLLSSSFDD 414 Score = 83.8 bits (198), Expect = 1e-16 Identities = 39/69 (56%), Positives = 56/69 (81%) Frame = -1 Query: 521 PQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASD 342 PQF QMR++I QNP+LL+AVLQQIGQTNPALLQ+IS++Q+AF+ MLN+P++ + A+ Sbjct: 248 PQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQDAFLNMLNQPIDRESESGATV 307 Query: 341 ENVADIQQP 315 V++ + P Sbjct: 308 PPVSNARIP 316 >AE014135-61|AAN06526.1| 343|Drosophila melanogaster CG1836-PB, isoform B protein. Length = 343 Score = 87.0 bits (206), Expect = 1e-17 Identities = 45/71 (63%), Positives = 57/71 (80%) Frame = -1 Query: 359 AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLA 180 +G A+D D++QP LG + I+++ QDK+AIERLKALGFPE +V+QAYFACEKNE A Sbjct: 277 SGSAADNE--DLEQP-LGV-STIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQA 332 Query: 179 ANFLLSQNFDD 147 ANFLLS +FDD Sbjct: 333 ANFLLSSSFDD 343 Score = 83.8 bits (198), Expect = 1e-16 Identities = 39/69 (56%), Positives = 56/69 (81%) Frame = -1 Query: 521 PQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASD 342 PQF QMR++I QNP+LL+AVLQQIGQTNPALLQ+IS++Q+AF+ MLN+P++ + A+ Sbjct: 177 PQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQDAFLNMLNQPIDRESESGATV 236 Query: 341 ENVADIQQP 315 V++ + P Sbjct: 237 PPVSNARIP 245 >AE014135-60|AAF59352.1| 414|Drosophila melanogaster CG1836-PA, isoform A protein. Length = 414 Score = 87.0 bits (206), Expect = 1e-17 Identities = 45/71 (63%), Positives = 57/71 (80%) Frame = -1 Query: 359 AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLA 180 +G A+D D++QP LG + I+++ QDK+AIERLKALGFPE +V+QAYFACEKNE A Sbjct: 348 SGSAADNE--DLEQP-LGV-STIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQA 403 Query: 179 ANFLLSQNFDD 147 ANFLLS +FDD Sbjct: 404 ANFLLSSSFDD 414 Score = 83.8 bits (198), Expect = 1e-16 Identities = 39/69 (56%), Positives = 56/69 (81%) Frame = -1 Query: 521 PQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASD 342 PQF QMR++I QNP+LL+AVLQQIGQTNPALLQ+IS++Q+AF+ MLN+P++ + A+ Sbjct: 248 PQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQDAFLNMLNQPIDRESESGATV 307 Query: 341 ENVADIQQP 315 V++ + P Sbjct: 308 PPVSNARIP 316 >AF136606-1|AAD33695.1| 414|Drosophila melanogaster DHR23 protein. Length = 414 Score = 85.4 bits (202), Expect = 4e-17 Identities = 44/71 (61%), Positives = 57/71 (80%) Frame = -1 Query: 359 AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLA 180 +G A+D D++QP LG + I+++ QDK+AIERLKALGFPE +V+QAYFACEKNE A Sbjct: 348 SGSAADNE--DLEQP-LGV-STIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQA 403 Query: 179 ANFLLSQNFDD 147 ANFLLS +F+D Sbjct: 404 ANFLLSSSFED 414 Score = 83.8 bits (198), Expect = 1e-16 Identities = 39/69 (56%), Positives = 56/69 (81%) Frame = -1 Query: 521 PQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASD 342 PQF QMR++I QNP+LL+AVLQQIGQTNPALLQ+IS++Q+AF+ MLN+P++ + A+ Sbjct: 248 PQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQDAFLNMLNQPIDRESESGATV 307 Query: 341 ENVADIQQP 315 V++ + P Sbjct: 308 PPVSNARIP 316 >AY089339-1|AAL90077.1| 290|Drosophila melanogaster AT15685p protein. Length = 290 Score = 72.9 bits (171), Expect = 2e-13 Identities = 41/121 (33%), Positives = 72/121 (59%) Frame = -1 Query: 509 QMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASDENVA 330 +MR +I QNP L++ ++ ++ +T+PA +V ++QE + M++ G + N Sbjct: 183 RMREMINQNPELIHRLMNRLAETDPATFEVFQRNQEELMNMIS-------GGASRTPN-- 233 Query: 329 DIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFD 150 +I+ Q I ++A++ A+ RL+ALGF M +QAY AC+K+E LAA L+ Q+ + Sbjct: 234 EIEHLQ------ITLTAEETAAVGRLEALGFERVMAVQAYLACDKDEQLAAEVLIRQSEE 287 Query: 149 D 147 D Sbjct: 288 D 288 >AE014297-3457|AAF56234.1| 290|Drosophila melanogaster CG10694-PA protein. Length = 290 Score = 72.9 bits (171), Expect = 2e-13 Identities = 41/121 (33%), Positives = 72/121 (59%) Frame = -1 Query: 509 QMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASDENVA 330 +MR +I QNP L++ ++ ++ +T+PA +V ++QE + M++ G + N Sbjct: 183 RMREMINQNPELIHRLMNRLAETDPATFEVFQRNQEELMNMIS-------GGASRTPN-- 233 Query: 329 DIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFD 150 +I+ Q I ++A++ A+ RL+ALGF M +QAY AC+K+E LAA L+ Q+ + Sbjct: 234 EIEHLQ------ITLTAEETAAVGRLEALGFERVMAVQAYLACDKDEQLAAEVLIRQSEE 287 Query: 149 D 147 D Sbjct: 288 D 288 >BT023777-1|AAZ41786.1| 905|Drosophila melanogaster LD29489p protein. Length = 905 Score = 31.9 bits (69), Expect = 0.54 Identities = 17/68 (25%), Positives = 36/68 (52%) Frame = -1 Query: 392 RMLNEPVNPSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQA 213 R N+ ++ G++SD+ +AD QQ +L + Q+ +Q +A+E + +++ Sbjct: 567 RERNDLLSSHLDGMSSDDEIAD-QQQELSVTTMAQIESQSVDALEDVTDDFSKIELILMK 625 Query: 212 YFACEKNE 189 +FA K + Sbjct: 626 FFAWRKTD 633 >AY119467-1|AAM50121.1| 581|Drosophila melanogaster GH04034p protein. Length = 581 Score = 31.9 bits (69), Expect = 0.54 Identities = 17/68 (25%), Positives = 36/68 (52%) Frame = -1 Query: 392 RMLNEPVNPSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQA 213 R N+ ++ G++SD+ +AD QQ +L + Q+ +Q +A+E + +++ Sbjct: 243 RERNDLLSSHLDGMSSDDEIAD-QQQELSVTTMAQIESQSVDALEDVTDDFSKIELILMK 301 Query: 212 YFACEKNE 189 +FA K + Sbjct: 302 FFAWRKTD 309 >AE014297-544|AAF54074.3| 905|Drosophila melanogaster CG1965-PA protein. Length = 905 Score = 31.9 bits (69), Expect = 0.54 Identities = 17/68 (25%), Positives = 36/68 (52%) Frame = -1 Query: 392 RMLNEPVNPSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQA 213 R N+ ++ G++SD+ +AD QQ +L + Q+ +Q +A+E + +++ Sbjct: 567 RERNDLLSSHLDGMSSDDEIAD-QQQELSVTTMAQIESQSVDALEDVTDDFSKIELILMK 625 Query: 212 YFACEKNE 189 +FA K + Sbjct: 626 FFAWRKTD 633 >BT001611-1|AAN71366.1| 697|Drosophila melanogaster RE32656p protein. Length = 697 Score = 30.3 bits (65), Expect = 1.7 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%) Frame = -1 Query: 518 QFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQ-EAFVRMLNEPVNPSAAGVASD 342 Q Q +QQ L Q+ Q L Q + H + + + V A A + Sbjct: 557 QAQAQEQHLQQQHQQHQLQLLQLQQQQQQLQQPVQHHPPQQLQQQQQQQVAQDPAASAFE 616 Query: 341 ENVADIQQPQLGSQNVIQVSAQDKEAIE 258 E+ +QQ QLG+ +++ A D+EA E Sbjct: 617 EHQRLVQQ-QLGANTPLRIFAPDEEAAE 643 >BT030410-1|ABO52830.1| 592|Drosophila melanogaster IP08946p protein. Length = 592 Score = 29.9 bits (64), Expect = 2.2 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -1 Query: 485 NPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPV 372 +P LL L GQ LQV QHQ++ V L+ P+ Sbjct: 122 HPALLQHALTPTGQQQQQQLQVQQQHQQSHVERLSPPM 159 >AE014297-2368|AAF55432.1| 277|Drosophila melanogaster CG5829-PA protein. Length = 277 Score = 29.9 bits (64), Expect = 2.2 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -1 Query: 485 NPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPV 372 +P LL L GQ LQV QHQ++ V L+ P+ Sbjct: 122 HPALLQHALTPTGQQQQQQLQVQQQHQQSHVERLSPPM 159 >BT015224-1|AAT94453.1| 697|Drosophila melanogaster RE33368p protein. Length = 697 Score = 28.7 bits (61), Expect = 5.1 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 1/88 (1%) Frame = -1 Query: 518 QFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQ-EAFVRMLNEPVNPSAAGVASD 342 Q Q +QQ L Q+ Q L Q + H + + + V A A + Sbjct: 557 QAQAQEQHLQQQHQQHQLQLLQLQQQQQQLQQPVQHHPPQQLQQQQQQQVAQDPAASAFE 616 Query: 341 ENVADIQQPQLGSQNVIQVSAQDKEAIE 258 E+ +QQ QLG+ +++ D+EA E Sbjct: 617 EHQRLVQQ-QLGANTPLRIFVPDEEAAE 643 >AE014297-3614|AAN14015.2| 697|Drosophila melanogaster CG13627-PB, isoform B protein. Length = 697 Score = 28.7 bits (61), Expect = 5.1 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 1/88 (1%) Frame = -1 Query: 518 QFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQ-EAFVRMLNEPVNPSAAGVASD 342 Q Q +QQ L Q+ Q L Q + H + + + V A A + Sbjct: 557 QAQAQEQHLQQQHQQHQLQLLQLQQQQQQLQQPVQHHPPQQLQQQQQQQVAQDPAASAFE 616 Query: 341 ENVADIQQPQLGSQNVIQVSAQDKEAIE 258 E+ +QQ QLG+ +++ D+EA E Sbjct: 617 EHQRLVQQ-QLGANTPLRIFVPDEEAAE 643 >AE014297-3613|AAF56325.1| 697|Drosophila melanogaster CG13627-PA, isoform A protein. Length = 697 Score = 28.7 bits (61), Expect = 5.1 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 1/88 (1%) Frame = -1 Query: 518 QFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQ-EAFVRMLNEPVNPSAAGVASD 342 Q Q +QQ L Q+ Q L Q + H + + + V A A + Sbjct: 557 QAQAQEQHLQQQHQQHQLQLLQLQQQQQQLQQPVQHHPPQQLQQQQQQQVAQDPAASAFE 616 Query: 341 ENVADIQQPQLGSQNVIQVSAQDKEAIE 258 E+ +QQ QLG+ +++ D+EA E Sbjct: 617 EHQRLVQQ-QLGANTPLRIFVPDEEAAE 643 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,889,033 Number of Sequences: 53049 Number of extensions: 319320 Number of successful extensions: 829 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 798 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 827 length of database: 24,988,368 effective HSP length: 80 effective length of database: 20,744,448 effective search space used: 1929233664 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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