BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS302A11f (521 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 100 7e-22 U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 31 0.38 U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 31 0.38 L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 29 1.5 L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 29 1.5 L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 29 1.5 AF125959-2|AAD14732.1| 531|Caenorhabditis elegans Udp-glucurono... 27 8.1 AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 8.1 >Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical protein ZK20.3 protein. Length = 372 Score = 100 bits (239), Expect = 7e-22 Identities = 56/127 (44%), Positives = 82/127 (64%), Gaps = 2/127 (1%) Frame = -1 Query: 521 PQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASD 342 PQ ++RA+IQQNP +L AVLQQ+ NP L+Q I +Q+AF+ +LN AG A+ Sbjct: 252 PQLAEIRALIQQNPEMLAAVLQQLAAVNPRLVQTIQNNQQAFMDLLNG--GAQGAGAAAG 309 Query: 341 ENVADIQQPQLGSQNVIQVSAQDKEAIERLKAL--GFPEHMVIQAYFACEKNENLAANFL 168 N + P+ ++VI +S ++ AIER+KA+ PE +V++AYFAC+KNE A NF+ Sbjct: 310 -NAPERNTPR---RHVIHLSPEEAAAIERIKAIVVNAPEAVVVEAYFACDKNEEAAINFI 365 Query: 167 LSQNFDD 147 S N D+ Sbjct: 366 FS-NLDE 371 Score = 29.1 bits (62), Expect = 2.0 Identities = 19/78 (24%), Positives = 33/78 (42%) Frame = -1 Query: 380 EPVNPSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFAC 201 EPV +AA ++ AD+ ++ + +E + + +G+ I A A Sbjct: 143 EPVPVAAAPASNPAPAADVAPEAAAPAEAEALTDEQEENVLAITGMGYDREQTIAALRAA 202 Query: 200 EKNENLAANFLLSQNFDD 147 N + A FLL+ DD Sbjct: 203 FWNPDRAVEFLLNGLPDD 220 >U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical protein T13H2.5b protein. Length = 1092 Score = 31.5 bits (68), Expect = 0.38 Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Frame = -1 Query: 518 QFQQMRAVIQQN--PNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVAS 345 Q QQ + + QQ PN+ +A LQQ Q QV+ Q+ V PV P A VA Sbjct: 864 QMQQQQQLAQQGLVPNVSSAWLQQQAQLAQQQQQVVQQNLLMRVPSAQTPVAPRAPTVAP 923 Query: 344 DENVADIQQP 315 V P Sbjct: 924 QSVVQQAPAP 933 >U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein T13H2.5a protein. Length = 2471 Score = 31.5 bits (68), Expect = 0.38 Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Frame = -1 Query: 518 QFQQMRAVIQQN--PNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVAS 345 Q QQ + + QQ PN+ +A LQQ Q QV+ Q+ V PV P A VA Sbjct: 2243 QMQQQQQLAQQGLVPNVSSAWLQQQAQLAQQQQQVVQQNLLMRVPSAQTPVAPRAPTVAP 2302 Query: 344 DENVADIQQP 315 V P Sbjct: 2303 QSVVQQAPAP 2312 >L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting protein protein8, isoform a protein. Length = 1132 Score = 29.5 bits (63), Expect = 1.5 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -1 Query: 515 FQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 402 F+Q + QQ P N ++QQ+G NP L ++ Q Q+ Sbjct: 870 FKQQQQQQQQQPQQSN-LMQQLGNINPQFLALLLQQQQ 906 Score = 28.7 bits (61), Expect = 2.7 Identities = 26/84 (30%), Positives = 32/84 (38%) Frame = -1 Query: 518 QFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASDE 339 QF Q IQQNP L+NA Q I Q +Q +Q Q A A A E Sbjct: 960 QFPQFPQAIQQNPLLMNAQHQLILQQQQLAMQ-HAQAQAAQAAQAQAAQAAQAQAQAQAE 1018 Query: 338 NVADIQQPQLGSQNVIQVSAQDKE 267 Q Q +Q Q Q ++ Sbjct: 1019 AKLKTQAAQAKAQADAQARVQTQQ 1042 >L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting protein protein8, isoform b protein. Length = 1780 Score = 29.5 bits (63), Expect = 1.5 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -1 Query: 515 FQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 402 F+Q + QQ P N ++QQ+G NP L ++ Q Q+ Sbjct: 870 FKQQQQQQQQQPQQSN-LMQQLGNINPQFLALLLQQQQ 906 >L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting protein protein8, isoform c protein. Length = 1697 Score = 29.5 bits (63), Expect = 1.5 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -1 Query: 515 FQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 402 F+Q + QQ P N ++QQ+G NP L ++ Q Q+ Sbjct: 870 FKQQQQQQQQQPQQSN-LMQQLGNINPQFLALLLQQQQ 906 >AF125959-2|AAD14732.1| 531|Caenorhabditis elegans Udp-glucuronosyltransferase protein8 protein. Length = 531 Score = 27.1 bits (57), Expect = 8.1 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +3 Query: 135 VKNLVIKILRQQKVSCKILIFFTSKIGLYHHMF 233 VKNL+ +L VSCK ++ F GL H F Sbjct: 3 VKNLLSILLVLGSVSCKNILIFNPIFGLSHVKF 35 >AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical protein Y40C5A.3 protein. Length = 2344 Score = 27.1 bits (57), Expect = 8.1 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = -1 Query: 368 PSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAI 261 PS++ V+S + Q+P S NV+++S + I Sbjct: 1103 PSSSSVSSSGSDLQTQEPTQASSNVVEISEESSSPI 1138 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,017,448 Number of Sequences: 27780 Number of extensions: 173498 Number of successful extensions: 508 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 478 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 495 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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