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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302A11f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69904-3|CAA93780.1|  372|Caenorhabditis elegans Hypothetical pr...   100   7e-22
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr...    31   0.38 
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr...    31   0.38 
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting...    29   1.5  
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting...    29   1.5  
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting...    29   1.5  
AF125959-2|AAD14732.1|  531|Caenorhabditis elegans Udp-glucurono...    27   8.1  
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z69904-3|CAA93780.1|  372|Caenorhabditis elegans Hypothetical
           protein ZK20.3 protein.
          Length = 372

 Score =  100 bits (239), Expect = 7e-22
 Identities = 56/127 (44%), Positives = 82/127 (64%), Gaps = 2/127 (1%)
 Frame = -1

Query: 521 PQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASD 342
           PQ  ++RA+IQQNP +L AVLQQ+   NP L+Q I  +Q+AF+ +LN       AG A+ 
Sbjct: 252 PQLAEIRALIQQNPEMLAAVLQQLAAVNPRLVQTIQNNQQAFMDLLNG--GAQGAGAAAG 309

Query: 341 ENVADIQQPQLGSQNVIQVSAQDKEAIERLKAL--GFPEHMVIQAYFACEKNENLAANFL 168
            N  +   P+   ++VI +S ++  AIER+KA+    PE +V++AYFAC+KNE  A NF+
Sbjct: 310 -NAPERNTPR---RHVIHLSPEEAAAIERIKAIVVNAPEAVVVEAYFACDKNEEAAINFI 365

Query: 167 LSQNFDD 147
            S N D+
Sbjct: 366 FS-NLDE 371



 Score = 29.1 bits (62), Expect = 2.0
 Identities = 19/78 (24%), Positives = 33/78 (42%)
 Frame = -1

Query: 380 EPVNPSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFAC 201
           EPV  +AA  ++    AD+            ++ + +E +  +  +G+     I A  A 
Sbjct: 143 EPVPVAAAPASNPAPAADVAPEAAAPAEAEALTDEQEENVLAITGMGYDREQTIAALRAA 202

Query: 200 EKNENLAANFLLSQNFDD 147
             N + A  FLL+   DD
Sbjct: 203 FWNPDRAVEFLLNGLPDD 220


>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical protein
            T13H2.5b protein.
          Length = 1092

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = -1

Query: 518  QFQQMRAVIQQN--PNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVAS 345
            Q QQ + + QQ   PN+ +A LQQ  Q      QV+ Q+    V     PV P A  VA 
Sbjct: 864  QMQQQQQLAQQGLVPNVSSAWLQQQAQLAQQQQQVVQQNLLMRVPSAQTPVAPRAPTVAP 923

Query: 344  DENVADIQQP 315
               V     P
Sbjct: 924  QSVVQQAPAP 933


>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
            T13H2.5a protein.
          Length = 2471

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = -1

Query: 518  QFQQMRAVIQQN--PNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVAS 345
            Q QQ + + QQ   PN+ +A LQQ  Q      QV+ Q+    V     PV P A  VA 
Sbjct: 2243 QMQQQQQLAQQGLVPNVSSAWLQQQAQLAQQQQQVVQQNLLMRVPSAQTPVAPRAPTVAP 2302

Query: 344  DENVADIQQP 315
               V     P
Sbjct: 2303 QSVVQQAPAP 2312


>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
           protein protein8, isoform a protein.
          Length = 1132

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -1

Query: 515 FQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 402
           F+Q +   QQ P   N ++QQ+G  NP  L ++ Q Q+
Sbjct: 870 FKQQQQQQQQQPQQSN-LMQQLGNINPQFLALLLQQQQ 906



 Score = 28.7 bits (61), Expect = 2.7
 Identities = 26/84 (30%), Positives = 32/84 (38%)
 Frame = -1

Query: 518  QFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASDE 339
            QF Q    IQQNP L+NA  Q I Q     +Q  +Q Q A            A   A  E
Sbjct: 960  QFPQFPQAIQQNPLLMNAQHQLILQQQQLAMQ-HAQAQAAQAAQAQAAQAAQAQAQAQAE 1018

Query: 338  NVADIQQPQLGSQNVIQVSAQDKE 267
                 Q  Q  +Q   Q   Q ++
Sbjct: 1019 AKLKTQAAQAKAQADAQARVQTQQ 1042


>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
           protein protein8, isoform b protein.
          Length = 1780

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -1

Query: 515 FQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 402
           F+Q +   QQ P   N ++QQ+G  NP  L ++ Q Q+
Sbjct: 870 FKQQQQQQQQQPQQSN-LMQQLGNINPQFLALLLQQQQ 906


>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
           protein protein8, isoform c protein.
          Length = 1697

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -1

Query: 515 FQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 402
           F+Q +   QQ P   N ++QQ+G  NP  L ++ Q Q+
Sbjct: 870 FKQQQQQQQQQPQQSN-LMQQLGNINPQFLALLLQQQQ 906


>AF125959-2|AAD14732.1|  531|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein8 protein.
          Length = 531

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 135 VKNLVIKILRQQKVSCKILIFFTSKIGLYHHMF 233
           VKNL+  +L    VSCK ++ F    GL H  F
Sbjct: 3   VKNLLSILLVLGSVSCKNILIFNPIFGLSHVKF 35


>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
            protein Y40C5A.3 protein.
          Length = 2344

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -1

Query: 368  PSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAI 261
            PS++ V+S  +    Q+P   S NV+++S +    I
Sbjct: 1103 PSSSSVSSSGSDLQTQEPTQASSNVVEISEESSSPI 1138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,017,448
Number of Sequences: 27780
Number of extensions: 173498
Number of successful extensions: 508
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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