Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302A08f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 1.1
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 4.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 4.4
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 5.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 5.8
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.8 bits (49), Expect = 1.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 261 NKIYFTP*VYAHTHD*SHSGIHS 193
N +Y TP + HT HS IH+
Sbjct: 406 NNVYSTPGPHHHTMGHGHSHIHA 428
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.9
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -3
Query: 363 SNYSASFVNYRANRRPVRFFNVI 295
SNY+ NY N + ++++N+I
Sbjct: 92 SNYNNYNNNYNTNYKKLQYYNII 114
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.9
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -3
Query: 363 SNYSASFVNYRANRRPVRFFNVI 295
SNY+ NY N + ++++N+I
Sbjct: 92 SNYNNYNNNYNTNYKKLQYYNII 114
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.9
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -3
Query: 363 SNYSASFVNYRANRRPVRFFNVI 295
SNY+ NY N + ++++N+I
Sbjct: 92 SNYNNYNNNYNTNYKKLQYYNII 114
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.9
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -3
Query: 363 SNYSASFVNYRANRRPVRFFNVI 295
SNY+ NY N + ++++N+I
Sbjct: 92 SNYNNYNNNYNTNYKKLQYYNII 114
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.9
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -3
Query: 363 SNYSASFVNYRANRRPVRFFNVI 295
SNY+ NY N + ++++N+I
Sbjct: 92 SNYNNYNNNYNTNYKKLQYYNII 114
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.9
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -3
Query: 363 SNYSASFVNYRANRRPVRFFNVI 295
SNY+ NY N + ++++N+I
Sbjct: 92 SNYNNYNNNYNTNYKKLQYYNII 114
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.9
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -3
Query: 363 SNYSASFVNYRANRRPVRFFNVI 295
SNY+ NY N + ++++N+I
Sbjct: 92 SNYNNYNNNYNTNYKKLQYYNII 114
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = -3
Query: 363 SNYSASFVNYRANRRPVRFFNVI 295
+NY+ NY N + ++++N+I
Sbjct: 96 NNYNNYNNNYNTNYKKLQYYNII 118
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -2
Query: 232 CPYARLIAQRHSFPENLHR 176
CPYAR I +R L R
Sbjct: 4 CPYARCIQERRHIRRELLR 22
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 238 LGCKVYFIREGYQGMV 285
+G K+YFI+EG +V
Sbjct: 489 IGSKMYFIQEGIVDIV 504
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 238 LGCKVYFIREGYQGMV 285
+G K+YFI+EG +V
Sbjct: 457 IGSKMYFIQEGIVDIV 472
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,164
Number of Sequences: 438
Number of extensions: 3197
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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