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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301H11f
         (366 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAP8A3.09c |paa1||protein phosphatase regulatory subunit Paa1|S...   125   2e-30
SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||...    28   0.52 
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ...    28   0.52 
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz...    27   0.69 
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi...    26   1.6  
SPBC24C6.11 |cwf14||G10 protein|Schizosaccharomyces pombe|chr 2|...    26   2.1  
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb...    26   2.1  
SPBC19C2.13c |||conserved eukaryotic protein|Schizosaccharomyces...    25   2.8  
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac...    25   3.7  
SPCC4G3.08 |psk1||serine/threonine protein kinase Psk1|Schizosac...    25   3.7  
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc...    24   6.4  
SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po...    24   8.5  
SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination ...    24   8.5  
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc...    24   8.5  
SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces po...    24   8.5  
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar...    24   8.5  

>SPAP8A3.09c |paa1||protein phosphatase regulatory subunit
           Paa1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 590

 Score =  125 bits (302), Expect = 2e-30
 Identities = 60/87 (68%), Positives = 75/87 (86%)
 Frame = +1

Query: 103 LYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLLAL 282
           LYPIAVLIDELK++++  RLN++++LSTIALALG ERT+ ELIPFL E+I DEDEVL AL
Sbjct: 10  LYPIAVLIDELKHDEITYRLNALERLSTIALALGPERTRDELIPFLDESIDDEDEVLSAL 69

Query: 283 AEQLGSFINLVGGGEFAHCLLPPLETL 363
           A+QLG+F++ VGG E+AH LL PLE L
Sbjct: 70  ADQLGNFVDYVGGPEYAHVLLSPLENL 96



 Score = 36.3 bits (80), Expect = 0.001
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
 Frame = +1

Query: 103 LYPIAVLIDELKNEDVQ-LRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-EVLL 276
           L  I  +I EL N+  Q +R      +  +A  LG E+T   L+P   E + DE+ EV L
Sbjct: 321 LEEIIPVIQELINDPAQHVRAALGMNIGALAPQLGKEKTTEYLLPMFLELLKDENPEVRL 380

Query: 277 ALAEQLGSFINLVGGGEFAHCLLPPLETL 363
            +  +L     +VG    +  LLP + TL
Sbjct: 381 NIISKLEVVNKVVGIELLSQSLLPAIVTL 409



 Score = 35.9 bits (79), Expect = 0.002
 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +1

Query: 106 YPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-EVLLAL 282
           Y + + ++ LK+E+ ++RLN I KL  +   +G+E     L+P +     D+   V LA+
Sbjct: 362 YLLPMFLELLKDENPEVRLNIISKLEVVNKVVGIELLSQSLLPAIVTLAEDKQWRVRLAI 421

Query: 283 AEQL 294
            + +
Sbjct: 422 IDYI 425


>SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 350

 Score = 27.9 bits (59), Expect = 0.52
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +1

Query: 64  IKMAASDSGTDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVER 213
           +  + SD  TDES++P+   + +++++D +   +S   L + A+A G  +
Sbjct: 56  VNYSMSDE-TDESMFPLDSELTDMEDDDTEYISDSTTDLPSAAMARGTRQ 104


>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
           Ste6|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 911

 Score = 27.9 bits (59), Expect = 0.52
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 166 SIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLLALAEQLGSFINLV 315
           SIKK  T  +  G+E  +S ++ F    +   DE  L+   Q+ S +NL+
Sbjct: 138 SIKKEGTQVIVFGIETVRSMVLSFPLIILSTLDENFLSEVAQVFSSLNLL 187


>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
           Mad1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 689

 Score = 27.5 bits (58), Expect = 0.69
 Identities = 21/57 (36%), Positives = 30/57 (52%)
 Frame = +1

Query: 130 ELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLLALAEQLGS 300
           EL+NE +Q  LNS K L T  L    E   ++L+ FL  T  +  E + +L  QL +
Sbjct: 295 ELENEKIQTELNSWKSLITNELPT-PEAVSNKLV-FLQNTNANLGERVSSLESQLSN 349


>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
           Urb1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1568

 Score = 26.2 bits (55), Expect = 1.6
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +1

Query: 160 LNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLLALAEQLGS-FINLVGGGEFAH 336
           +NS KK +     + V  T  E IPF  +     D+   A+   L   F NLV  GE A+
Sbjct: 595 VNSQKKTAPEVSPISV--TLIEQIPFFLQKRDISDDSKDAVLSWLSDLFSNLVCTGEDAN 652

Query: 337 CLLPPLETL 363
           CL   LE +
Sbjct: 653 CLFHLLENV 661


>SPBC24C6.11 |cwf14||G10 protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 146

 Score = 25.8 bits (54), Expect = 2.1
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -1

Query: 210 LHAQSQRDRRQLLYR---VQTKLYILILQLIYENGNRIQ*FIRPG 85
           LH Q  R    L Y+   + T+LY  +L+  Y +GN I  + +PG
Sbjct: 52  LHHQRSRYIYDLYYKREAISTELYNWLLKQNYADGNLIAKWKKPG 96


>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1428

 Score = 25.8 bits (54), Expect = 2.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 187 IALALGVERTKSELIPFLTETIYDEDEVL 273
           + L   +E+ K E++PFL    Y  +EVL
Sbjct: 473 LVLKSSIEKEKVEIVPFLDIRKYSPNEVL 501


>SPBC19C2.13c |||conserved eukaryotic protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 366

 Score = 25.4 bits (53), Expect = 2.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 231 DQLRFSPLHAQSQRDRRQLLYRVQTKLYI 145
           D  +F+P    S   R+ LLYR++ KL +
Sbjct: 153 DNEKFNPEVISSLASRQDLLYRIRDKLLV 181


>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
           Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1373

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 234 RDQLRFSPLHAQSQRDRRQLLYRVQ 160
           RD+L F   +A+ +RD R L  R+Q
Sbjct: 578 RDELNFDQPNAEQERDIRDLQERLQ 602


>SPCC4G3.08 |psk1||serine/threonine protein kinase
           Psk1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 436

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 118 VLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSE 225
           VL+ + KN         +KK S +  A G+E+TK+E
Sbjct: 105 VLLVKQKNTGRLFAQKQLKKASIVLRAKGLEQTKNE 140


>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
            |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1063

 Score = 24.2 bits (50), Expect = 6.4
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +1

Query: 130  ELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDE 261
            +L NE +   +  +K+  T+ LAL  ++ K+++   LT+  +DE
Sbjct: 970  DLGNE-INSEIGFLKEPDTMNLALDADKDKTKMQNKLTQINFDE 1012


>SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 635

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 166 SIKKLSTIALALGVERTKSELIPFLTETI 252
           S+ KLS I+  +GVE   +E + F+ E+I
Sbjct: 298 SLVKLSGISSLMGVESYLAERLRFIGESI 326


>SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination
           repair protein Sfr1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 299

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 160 NEAVHPHSSAHL*ERQSDTMIHPSRSRSLPF 68
           +E VHP +   L     DT IH S   + PF
Sbjct: 61  SETVHPENEKALTPDLRDTKIHTSLPITTPF 91


>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1679

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +1

Query: 121 LIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDE 267
           L+  L++E   +R++  + LS I       R  +EL+P L   I+D  E
Sbjct: 364 LLTSLQSELPDVRVSIDEALSIIIPYYSNFRFSNELLPVLEPFIFDSPE 412


>SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 433

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 247 TIYDEDEVLLALAEQLGSFIN 309
           TIY  D +LLA+   L +++N
Sbjct: 209 TIYHADTILLAVGAYLNAYLN 229


>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
           I|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 859

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 172 KKLSTIALALGVERTKSELIPFLTETIYDEDEVLLA 279
           K L T+   L  +  K+E+   +  T+Y+EDEVL A
Sbjct: 172 KSLFTLRQPLFFQPRKTEIC--IAITMYNEDEVLFA 205


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,260,549
Number of Sequences: 5004
Number of extensions: 19591
Number of successful extensions: 79
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 114084208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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