BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS301H10f (336 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 124 2e-29 AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 124 2e-29 AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 124 2e-29 Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 118 2e-27 AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 29 1.5 U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 29 2.0 AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 28 3.5 AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 28 3.5 EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin pro... 27 4.6 BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p pro... 27 4.6 AY069731-1|AAL39876.1| 934|Drosophila melanogaster LP03809p pro... 27 4.6 AY061391-1|AAL28939.1| 1712|Drosophila melanogaster LD31383p pro... 27 4.6 AE014298-1589|AAF48024.2| 1712|Drosophila melanogaster CG1657-PA... 27 4.6 AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA... 27 4.6 AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,... 27 4.6 BT023805-1|AAZ66312.1| 623|Drosophila melanogaster RE55817p pro... 27 8.0 AY118407-1|AAM48436.1| 282|Drosophila melanogaster RE62293p pro... 27 8.0 AY069787-1|AAL39932.1| 623|Drosophila melanogaster SD02907p pro... 27 8.0 AE014134-2026|AAS64677.1| 969|Drosophila melanogaster CG4705-PB... 27 8.0 AE014134-2025|AAF53065.2| 989|Drosophila melanogaster CG4705-PA... 27 8.0 >S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal protein rpA2 protein. Length = 112 Score = 124 bits (300), Expect = 2e-29 Identities = 59/67 (88%), Positives = 65/67 (97%) Frame = +3 Query: 54 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 233 M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60 Query: 234 TNIGSGV 254 TNIGSGV Sbjct: 61 TNIGSGV 67 >AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p protein. Length = 112 Score = 124 bits (300), Expect = 2e-29 Identities = 59/67 (88%), Positives = 65/67 (97%) Frame = +3 Query: 54 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 233 M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60 Query: 234 TNIGSGV 254 TNIGSGV Sbjct: 61 TNIGSGV 67 >AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA protein. Length = 112 Score = 124 bits (300), Expect = 2e-29 Identities = 59/67 (88%), Positives = 65/67 (97%) Frame = +3 Query: 54 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 233 M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60 Query: 234 TNIGSGV 254 TNIGSGV Sbjct: 61 TNIGSGV 67 >Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Drosophila melanogastermRNA for A-type ribosomal protein rp21C. ). Length = 112 Score = 118 bits (284), Expect = 2e-27 Identities = 57/67 (85%), Positives = 63/67 (94%) Frame = +3 Query: 54 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 233 M +KAELA VY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALE INV+DLI Sbjct: 1 MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60 Query: 234 TNIGSGV 254 TNIGSGV Sbjct: 61 TNIGSGV 67 >AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein protein. Length = 1047 Score = 29.1 bits (62), Expect = 1.5 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 235 VIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEI 134 +I S+ L+P+K N P QY T+ A K +I Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKI 288 Score = 28.7 bits (61), Expect = 2.0 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = -3 Query: 226 SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTR 98 S+ +P+K N P QY T+ A K + SP S T+ Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452 >U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative single-stranded nucleicacid binding protein protein. Length = 1043 Score = 28.7 bits (61), Expect = 2.0 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = -3 Query: 226 SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTR 98 S+ +P+K N P QY T+ A K + SP S T+ Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452 Score = 27.5 bits (58), Expect = 4.6 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 226 SRTLMPSKALANRPGQYGSTSTAAAFKMVEI 134 S+ L+P+K N P QY T+ A K +I Sbjct: 258 SQNLVPAKTHINTPTQYNDTNATNALKTAKI 288 >AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein protein. Length = 970 Score = 27.9 bits (59), Expect = 3.5 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = -3 Query: 226 SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTR 98 S+ +P+K N P QY T+ A K + SP S T+ Sbjct: 333 SQNFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTK 375 >AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein protein. Length = 970 Score = 27.9 bits (59), Expect = 3.5 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = -3 Query: 226 SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTR 98 S+ +P+K N P QY T+ A K + SP S T+ Sbjct: 333 SQNFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTK 375 >EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin protein. Length = 1840 Score = 27.5 bits (58), Expect = 4.6 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -3 Query: 253 TPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSST 101 TP S + + A+ PGQ +TS+ A S T+TSSST Sbjct: 1538 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588 >BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p protein. Length = 1840 Score = 27.5 bits (58), Expect = 4.6 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -3 Query: 253 TPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSST 101 TP S + + A+ PGQ +TS+ A S T+TSSST Sbjct: 1538 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588 >AY069731-1|AAL39876.1| 934|Drosophila melanogaster LP03809p protein. Length = 934 Score = 27.5 bits (58), Expect = 4.6 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -3 Query: 253 TPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSST 101 TP S + + A+ PGQ +TS+ A S T+TSSST Sbjct: 632 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 682 >AY061391-1|AAL28939.1| 1712|Drosophila melanogaster LD31383p protein. Length = 1712 Score = 27.5 bits (58), Expect = 4.6 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -1 Query: 192 TDLANMALHLQPPLSRWWKFSHQLRQHHH 106 + ++N +L+L+ P K H R+HHH Sbjct: 969 SSISNQSLNLEEPPPPMGKHHHHHREHHH 997 >AE014298-1589|AAF48024.2| 1712|Drosophila melanogaster CG1657-PA protein. Length = 1712 Score = 27.5 bits (58), Expect = 4.6 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -1 Query: 192 TDLANMALHLQPPLSRWWKFSHQLRQHHH 106 + ++N +L+L+ P K H R+HHH Sbjct: 969 SSISNQSLNLEEPPPPMGKHHHHHREHHH 997 >AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA protein. Length = 1837 Score = 27.5 bits (58), Expect = 4.6 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -3 Query: 253 TPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSST 101 TP S + + A+ PGQ +TS+ A S T+TSSST Sbjct: 1535 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1585 >AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB, isoform B protein. Length = 2833 Score = 27.5 bits (58), Expect = 4.6 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = -1 Query: 183 ANMALHLQPPLSRWWKFSHQLRQHHH 106 AN A+H P H+ RQHHH Sbjct: 1835 ANPAMHFVSPFKSLENLLHEDRQHHH 1860 >BT023805-1|AAZ66312.1| 623|Drosophila melanogaster RE55817p protein. Length = 623 Score = 26.6 bits (56), Expect = 8.0 Identities = 15/50 (30%), Positives = 20/50 (40%) Frame = +2 Query: 20 RPTATCTFKTKNGVKS*ISMCLLCSHPGG**CCRNW*ENFHHLESGGCRC 169 RP C + VK + CL C H G W E + + GC+C Sbjct: 563 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 611 >AY118407-1|AAM48436.1| 282|Drosophila melanogaster RE62293p protein. Length = 282 Score = 26.6 bits (56), Expect = 8.0 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = -3 Query: 244 PMLVIRSRTLMPS-KALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMRA 89 P+++I ++ + S + + G+ STS+AA F + +T+T STR A Sbjct: 166 PLVLIANKVDLESQRRVTTEEGRNLSTSSAARFLRHRLHCVITSTRHSTRWSA 218 >AY069787-1|AAL39932.1| 623|Drosophila melanogaster SD02907p protein. Length = 623 Score = 26.6 bits (56), Expect = 8.0 Identities = 15/50 (30%), Positives = 20/50 (40%) Frame = +2 Query: 20 RPTATCTFKTKNGVKS*ISMCLLCSHPGG**CCRNW*ENFHHLESGGCRC 169 RP C + VK + CL C H G W E + + GC+C Sbjct: 563 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 611 >AE014134-2026|AAS64677.1| 969|Drosophila melanogaster CG4705-PB, isoform B protein. Length = 969 Score = 26.6 bits (56), Expect = 8.0 Identities = 15/50 (30%), Positives = 20/50 (40%) Frame = +2 Query: 20 RPTATCTFKTKNGVKS*ISMCLLCSHPGG**CCRNW*ENFHHLESGGCRC 169 RP C + VK + CL C H G W E + + GC+C Sbjct: 909 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 957 >AE014134-2025|AAF53065.2| 989|Drosophila melanogaster CG4705-PA, isoform A protein. Length = 989 Score = 26.6 bits (56), Expect = 8.0 Identities = 15/50 (30%), Positives = 20/50 (40%) Frame = +2 Query: 20 RPTATCTFKTKNGVKS*ISMCLLCSHPGG**CCRNW*ENFHHLESGGCRC 169 RP C + VK + CL C H G W E + + GC+C Sbjct: 929 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 977 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,420,948 Number of Sequences: 53049 Number of extensions: 272016 Number of successful extensions: 884 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 849 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 883 length of database: 24,988,368 effective HSP length: 75 effective length of database: 21,009,693 effective search space used: 756348948 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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