BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS301G12f (516 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 1.5 AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 24 3.5 AF532982-1|AAQ10289.1| 459|Anopheles gambiae putative RNA methy... 23 4.6 DQ370040-1|ABD18601.1| 121|Anopheles gambiae putative TIL domai... 23 8.1 >AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative differentiation regulator protein. Length = 1283 Score = 25.0 bits (52), Expect = 1.5 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +3 Query: 273 ERCTPRHPPRAAEPVLCPSSISLPFSYAALELIPPGFSAP 392 ER R R E ++ SLP + ++ +PPG SAP Sbjct: 524 ERERERERERERERMMHMMPHSLPRPFFSIPGLPPGLSAP 563 >AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. Length = 3398 Score = 23.8 bits (49), Expect = 3.5 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -2 Query: 125 NKKVYERLY*MSLQVSVSCTRPALCSG 45 +KK+++ L S ++ CT P+LC G Sbjct: 2323 SKKIWDALREKSF-LTTDCTNPSLCHG 2348 >AF532982-1|AAQ10289.1| 459|Anopheles gambiae putative RNA methylase protein. Length = 459 Score = 23.4 bits (48), Expect = 4.6 Identities = 11/42 (26%), Positives = 19/42 (45%) Frame = -3 Query: 502 IKTQVYWTTQEHRHRHIVEMFSIFKDFLSHV*SKTSHGAEKP 377 +K V W QEH E+ S+ + + + + H E+P Sbjct: 5 LKKYVLWFAQEHVDFRQAEIASLLRIWNIQMETPADHNPERP 46 >DQ370040-1|ABD18601.1| 121|Anopheles gambiae putative TIL domain polypeptide protein. Length = 121 Score = 22.6 bits (46), Expect = 8.1 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = -3 Query: 316 TGSAALGGCRGVQRSSRLLVCQCPITINNRVKRL 215 T A G R R + + VC C +TI + RL Sbjct: 19 TAIVAQGTGRKTVRKNAVFVCDCVVTIIVFLSRL 52 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 573,525 Number of Sequences: 2352 Number of extensions: 11467 Number of successful extensions: 14 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 14 length of database: 563,979 effective HSP length: 60 effective length of database: 422,859 effective search space used: 46937349 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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