BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS301G05f (428 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 5.8 AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 7.7 AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.7 >AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive opsin protein. Length = 371 Score = 21.0 bits (42), Expect = 5.8 Identities = 7/17 (41%), Positives = 10/17 (58%) Frame = -2 Query: 196 YTVATPRMPSQYVWGKY 146 YT+ MP VWG++ Sbjct: 172 YTIPWALMPVMGVWGRF 188 >AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type D2 protein. Length = 456 Score = 20.6 bits (41), Expect = 7.7 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = -3 Query: 381 KMGFYSFLKSTGKQELTPRSHIRG 310 K+G L ++G+ ELT R H G Sbjct: 241 KLGTKQVLMASGELELTLRIHRGG 264 >AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. Length = 898 Score = 20.6 bits (41), Expect = 7.7 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = -2 Query: 211 VHTIPYTVATPRMPSQ 164 +HTIP TPR ++ Sbjct: 398 IHTIPEVKVTPRFQAK 413 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 128,713 Number of Sequences: 438 Number of extensions: 3075 Number of successful extensions: 5 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5 length of database: 146,343 effective HSP length: 52 effective length of database: 123,567 effective search space used: 11121030 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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