BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS301G02f (472 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 2.5 U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 22 3.3 AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 21 4.3 DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13 pro... 21 5.7 AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 21 5.7 AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 21 7.6 AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 21 7.6 AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. 21 7.6 >AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax protein. Length = 297 Score = 22.2 bits (45), Expect = 2.5 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 6/55 (10%) Frame = +2 Query: 11 GDSRRLTNGATRTRHTELR------RYYYRRRPTELQGRMARTYRNTADGATHAI 157 G+++R TR + EL RY RRR E+ + T +N H + Sbjct: 218 GETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTNKNLVSKPPHEV 272 >U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse transcriptase andRNase H protein. Length = 712 Score = 21.8 bits (44), Expect = 3.3 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +3 Query: 153 LYSVPLPGSGSVLAFILNMLRG 218 LY + GS V+AF LRG Sbjct: 616 LYQIQEDGSRGVIAFASRSLRG 637 >AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombinase protein. Length = 340 Score = 21.4 bits (43), Expect = 4.3 Identities = 11/38 (28%), Positives = 18/38 (47%) Frame = +2 Query: 284 LQIRVREANRPRGPFTSQP*PKYS*VRAKPCKC*VGCL 397 ++IR+ + + GP QP + + KP C V L Sbjct: 195 VEIRIPDVIKTSGPHKFQPLLRLPKFKKKPLLCVVSTL 232 Score = 20.6 bits (41), Expect = 7.6 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +2 Query: 170 ARLGLSASVYTEHAT 214 A G+ S+YT H+T Sbjct: 275 AESGVDTSIYTAHST 289 >DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13 protein. Length = 377 Score = 21.0 bits (42), Expect = 5.7 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +3 Query: 315 LGDPSRHNLNQS 350 L DPS+H LN + Sbjct: 264 LSDPSKHGLNDA 275 >AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase protein. Length = 580 Score = 21.0 bits (42), Expect = 5.7 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -3 Query: 467 PXNTAS*CFQSLYVRVSSTRPL 402 P NT + C Q + V +S TR L Sbjct: 226 PPNTENNCAQPVVVIMSPTREL 247 >AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein protein. Length = 287 Score = 20.6 bits (41), Expect = 7.6 Identities = 8/24 (33%), Positives = 13/24 (54%) Frame = -1 Query: 319 PRPVRFAYAYLKVSTMRCQYRSEP 248 P P R Y ++K ++ + Q EP Sbjct: 117 PPPARSPYEWIKKTSYQSQPNPEP 140 >AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein protein. Length = 249 Score = 20.6 bits (41), Expect = 7.6 Identities = 8/24 (33%), Positives = 13/24 (54%) Frame = -1 Query: 319 PRPVRFAYAYLKVSTMRCQYRSEP 248 P P R Y ++K ++ + Q EP Sbjct: 117 PPPARSPYEWIKKTSYQSQPNPEP 140 >AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. Length = 256 Score = 20.6 bits (41), Expect = 7.6 Identities = 8/25 (32%), Positives = 14/25 (56%) Frame = +3 Query: 36 ARLVQDIQNFGGIITEDDLRNYRVE 110 ++ + D Q G ++ + R YRVE Sbjct: 184 SKKIDDNQKVGYVVEGRNYRKYRVE 208 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 106,305 Number of Sequences: 336 Number of extensions: 2135 Number of successful extensions: 10 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 122,585 effective HSP length: 52 effective length of database: 105,113 effective search space used: 10931752 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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