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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0160.Seq
         (363 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0548 + 4099386-4099847,4100435-4101316                          130   2e-31
03_01_0547 + 4093196-4093657,4094267-4095148                          130   2e-31
03_01_0544 + 4082528-4082989,4083585-4084466                          130   2e-31
03_01_0543 + 4076981-4077442,4078145-4079026                          130   2e-31
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165...    77   4e-15
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558...    77   4e-15
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299...    51   2e-07
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623...    44   3e-05
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135...    44   4e-05
02_04_0462 + 23131433-23132836                                         42   1e-04
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572...    37   0.006
03_05_0511 + 25056018-25059107                                         32   0.16 
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701...    31   0.21 
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051...    31   0.28 
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936...    31   0.37 
04_01_0103 + 1082077-1082167,1083037-1085477                           31   0.37 
02_04_0017 + 18937774-18937864,18938505-18940945                       31   0.37 
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912     30   0.49 
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314...    30   0.64 
01_06_0662 + 30987187-30987277,30987825-30990214                       30   0.64 
02_04_0148 - 20198407-20201424                                         29   1.1  
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236...    28   2.6  
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270...    28   2.6  
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811...    27   3.4  
12_02_1174 - 26696869-26698191                                         26   7.9  
02_05_0564 + 30003817-30005778                                         26   7.9  

>03_01_0548 + 4099386-4099847,4100435-4101316
          Length = 447

 Score =  130 bits (315), Expect = 2e-31
 Identities = 61/67 (91%), Positives = 62/67 (92%)
 Frame = +2

Query: 53  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 232
           MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 233 DKLKAER 253
           DKLKAER
Sbjct: 61  DKLKAER 67



 Score = 72.5 bits (170), Expect = 9e-14
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +1

Query: 256 RGITIDIAXWKXETSKYYVTIIDAPGHRDFIKNMIT 363
           RGITIDIA WK ET+KYY T+IDAPGHRDFIKNMIT
Sbjct: 69  RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMIT 104


>03_01_0547 + 4093196-4093657,4094267-4095148
          Length = 447

 Score =  130 bits (315), Expect = 2e-31
 Identities = 61/67 (91%), Positives = 62/67 (92%)
 Frame = +2

Query: 53  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 232
           MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 233 DKLKAER 253
           DKLKAER
Sbjct: 61  DKLKAER 67



 Score = 72.5 bits (170), Expect = 9e-14
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +1

Query: 256 RGITIDIAXWKXETSKYYVTIIDAPGHRDFIKNMIT 363
           RGITIDIA WK ET+KYY T+IDAPGHRDFIKNMIT
Sbjct: 69  RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMIT 104


>03_01_0544 + 4082528-4082989,4083585-4084466
          Length = 447

 Score =  130 bits (315), Expect = 2e-31
 Identities = 61/67 (91%), Positives = 62/67 (92%)
 Frame = +2

Query: 53  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 232
           MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 233 DKLKAER 253
           DKLKAER
Sbjct: 61  DKLKAER 67



 Score = 72.5 bits (170), Expect = 9e-14
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +1

Query: 256 RGITIDIAXWKXETSKYYVTIIDAPGHRDFIKNMIT 363
           RGITIDIA WK ET+KYY T+IDAPGHRDFIKNMIT
Sbjct: 69  RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMIT 104


>03_01_0543 + 4076981-4077442,4078145-4079026
          Length = 447

 Score =  130 bits (315), Expect = 2e-31
 Identities = 61/67 (91%), Positives = 62/67 (92%)
 Frame = +2

Query: 53  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 232
           MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 233 DKLKAER 253
           DKLKAER
Sbjct: 61  DKLKAER 67



 Score = 72.5 bits (170), Expect = 9e-14
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +1

Query: 256 RGITIDIAXWKXETSKYYVTIIDAPGHRDFIKNMIT 363
           RGITIDIA WK ET+KYY T+IDAPGHRDFIKNMIT
Sbjct: 69  RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMIT 104


>04_04_1015 -
           30115377-30115477,30115570-30115615,30116491-30116590,
           30116676-30116771,30119519-30119556,30119623-30119733,
           30119820-30119951,30120024-30120263,30120532-30120700,
           30120994-30121493,30121581-30121691,30121802-30122133,
           30122603-30122737,30122839-30122988,30123809-30123947
          Length = 799

 Score = 77.0 bits (181), Expect = 4e-15
 Identities = 32/62 (51%), Positives = 45/62 (72%)
 Frame = +2

Query: 68  THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 247
           + +N+ ++GHVDSGKST +G L++  G I K+ + K EKEA+E GKGSF YAW +D+   
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305

Query: 248 ER 253
           ER
Sbjct: 306 ER 307



 Score = 47.2 bits (107), Expect = 4e-06
 Identities = 18/36 (50%), Positives = 27/36 (75%)
 Frame = +1

Query: 256 RGITIDIAXWKXETSKYYVTIIDAPGHRDFIKNMIT 363
           RG+T+ +A    ET KY V ++D+PGH+DF+ NMI+
Sbjct: 309 RGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMIS 344


>04_04_1008 -
           30054674-30054774,30054867-30054912,30055788-30055887,
           30055973-30056068,30058816-30058853,30058920-30059030,
           30059117-30059248,30059321-30059560,30059829-30059997,
           30060291-30060790,30060878-30060988,30061099-30061430,
           30061900-30062034,30062136-30062285,30063106-30063244
          Length = 799

 Score = 77.0 bits (181), Expect = 4e-15
 Identities = 32/62 (51%), Positives = 45/62 (72%)
 Frame = +2

Query: 68  THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 247
           + +N+ ++GHVDSGKST +G L++  G I K+ + K EKEA+E GKGSF YAW +D+   
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305

Query: 248 ER 253
           ER
Sbjct: 306 ER 307



 Score = 47.2 bits (107), Expect = 4e-06
 Identities = 18/36 (50%), Positives = 27/36 (75%)
 Frame = +1

Query: 256 RGITIDIAXWKXETSKYYVTIIDAPGHRDFIKNMIT 363
           RG+T+ +A    ET KY V ++D+PGH+DF+ NMI+
Sbjct: 309 RGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMIS 344


>04_03_0107 +
           11328267-11328276,11329059-11329170,11329862-11329907,
           11330185-11330256,11332292-11332303,11332880-11332942,
           11333038-11333192,11333303-11333367,11334645-11334795,
           11335230-11335335,11335440-11335575,11336310-11336374,
           11337003-11337188,11337298-11337399
          Length = 426

 Score = 51.2 bits (117), Expect = 2e-07
 Identities = 21/51 (41%), Positives = 36/51 (70%)
 Frame = +2

Query: 101 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 253
           D+GKST  G +++  G +D RTI+K+EKEA++  + S+  A+++D  + ER
Sbjct: 4   DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 54


>04_04_1593 -
           34661670-34661798,34661882-34661989,34662129-34662368,
           34662614-34662782,34662872-34663362,34663681-34663991,
           34664396-34664473,34665034-34665228,34665363-34665524,
           34665759-34665840
          Length = 654

 Score = 44.4 bits (100), Expect = 3e-05
 Identities = 16/36 (44%), Positives = 26/36 (72%)
 Frame = +1

Query: 256 RGITIDIAXWKXETSKYYVTIIDAPGHRDFIKNMIT 363
           RGIT+ +     +T  Y+V ++D+PGH+DF+ NMI+
Sbjct: 296 RGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMIS 331



 Score = 29.5 bits (63), Expect = 0.85
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 197 MGKGSFKYAWVLDKLKAER 253
           +GKGSF YAW +D+   ER
Sbjct: 276 IGKGSFAYAWAMDESADER 294


>03_06_0699 -
           35612919-35612989,35613079-35613319,35613506-35613568,
           35613644-35613709,35614110-35614193,35614685-35614890,
           35614977-35615067,35615176-35615280,35615552-35615626,
           35615728-35615820,35615914-35615989,35616115-35616305
          Length = 453

 Score = 44.0 bits (99), Expect = 4e-05
 Identities = 19/36 (52%), Positives = 25/36 (69%)
 Frame = +1

Query: 256 RGITIDIAXWKXETSKYYVTIIDAPGHRDFIKNMIT 363
           RGITI  A  + ET+K +   +D PGH D++KNMIT
Sbjct: 114 RGITIATAHVEYETAKRHYAHVDCPGHADYVKNMIT 149



 Score = 34.7 bits (76), Expect = 0.023
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
 Frame = +2

Query: 59  KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 208
           + K H+N+  IGHVD GK+T T     ++ + G       ++ +K  +E  +G
Sbjct: 63  RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARG 115


>02_04_0462 + 23131433-23132836
          Length = 467

 Score = 42.3 bits (95), Expect = 1e-04
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +1

Query: 256 RGITIDIAXWKXETSKYYVTIIDAPGHRDFIKNMIT 363
           RGITI+ A  + ET   +   +D PGH D++KNMIT
Sbjct: 117 RGITINTATVEYETETRHYAHVDCPGHADYVKNMIT 152



 Score = 37.5 bits (83), Expect = 0.003
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 50  KMGKEKTHINIVVIGHVDSGKSTTTGHL---IYKCGGIDKRTIEKFEKEAQEMGKG 208
           K  + K H+NI  IGHVD GK+T T  L   +   GG   +  ++ +   +E  +G
Sbjct: 63  KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118


>02_03_0105 -
           15254959-15255216,15256235-15256299,15257080-15257215,
           15257314-15257419,15257642-15257792,15258817-15258881,
           15258980-15259134,15259219-15259281,15259846-15259917,
           15260364-15260408
          Length = 371

 Score = 36.7 bits (81), Expect = 0.006
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 256 RGITIDIAXWKXETSKYYVTIIDAPGHRDFIKNMIT 363
           +G T+++     ET     TI+DAPGH+ ++ NMI+
Sbjct: 15  KGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMIS 50


>03_05_0511 + 25056018-25059107
          Length = 1029

 Score = 31.9 bits (69), Expect = 0.16
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 77  NIVVIGHVDSGKSTTTGHLIYKCG 148
           N  ++ HVD GK+T   HL+  CG
Sbjct: 12  NTCILAHVDHGKTTLADHLVASCG 35


>01_06_0734 +
           31569017-31569358,31569832-31569906,31570009-31570159,
           31570716-31570784,31570864-31571036,31571474-31571611,
           31571747-31571872,31571951-31572049,31573175-31573298,
           31573465-31573528,31573798-31573852,31573951-31574075,
           31574228-31574301,31574436-31574485,31574722-31574808,
           31574897-31574947,31575025-31575108,31575400-31575498
          Length = 661

 Score = 31.5 bits (68), Expect = 0.21
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 77  NIVVIGHVDSGKSTTTGHLIYKCG 148
           N+ VI HVD GK+T    L+ +CG
Sbjct: 66  NVAVIAHVDHGKTTLMDRLLRQCG 89


>03_05_0044 +
           20203644-20204054,20204695-20204916,20205092-20205130,
           20206275-20206396,20206489-20206639,20207892-20207963,
           20208256-20208351,20208861-20208949,20209068-20209134,
           20210197-20210235,20210369-20210429,20210572-20210681,
           20210766-20210840,20210914-20210982,20213126-20213247,
           20214682-20214807,20214897-20215017,20215133-20215233,
           20215564-20215624,20216560-20216613,20217585-20217689
          Length = 770

 Score = 31.1 bits (67), Expect = 0.28
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +1

Query: 256 RGITIDIAXWKXETSKYYVTIIDAPGHRDF 345
           +GITI  A      + Y V IID PGH DF
Sbjct: 120 KGITIQSAATYCTWNGYQVNIIDTPGHVDF 149



 Score = 29.5 bits (63), Expect = 0.85
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 77  NIVVIGHVDSGKSTTTGHLIYKCGGI 154
           NI +  H+DSGK+T T  ++Y  G I
Sbjct: 70  NIGISAHIDSGKTTLTERVLYYTGRI 95


>04_04_0640 -
           26891552-26891725,26891814-26892326,26892698-26893644,
           26893778-26894114,26894413-26894462,26895020-26895248
          Length = 749

 Score = 30.7 bits (66), Expect = 0.37
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = +2

Query: 71  HINIVVIGHVDSGKSTTTGHLIYKCG 148
           HI+ V++ H+D+GK+TTT  ++Y  G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129



 Score = 29.5 bits (63), Expect = 0.85
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +1

Query: 256 RGITIDIAXWKXETSKYYVTIIDAPGHRDF 345
           RGITI         +K+ + IID PGH DF
Sbjct: 153 RGITITSPPTTAFWNKHRINIIDTPGHVDF 182


>04_01_0103 + 1082077-1082167,1083037-1085477
          Length = 843

 Score = 30.7 bits (66), Expect = 0.37
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +2

Query: 53  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 148
           M K+    N+ VI HVD GKST T  L+   G
Sbjct: 13  MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44


>02_04_0017 + 18937774-18937864,18938505-18940945
          Length = 843

 Score = 30.7 bits (66), Expect = 0.37
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +2

Query: 53  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 148
           M K+    N+ VI HVD GKST T  L+   G
Sbjct: 13  MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44


>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
          Length = 853

 Score = 30.3 bits (65), Expect = 0.49
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +2

Query: 53  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 148
           M K+    N+ VI HVD GKST T  L+   G
Sbjct: 13  MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44



 Score = 27.1 bits (57), Expect = 4.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 286 KXETSKYYVTIIDAPGHRDF 345
           K + + Y + +ID+PGH DF
Sbjct: 92  KRDGNSYLINLIDSPGHIDF 111


>02_01_0432 -
           3144560-3144655,3144792-3144832,3145019-3145094,
           3145465-3145542,3146121-3146208,3146613-3146686,
           3147445-3147579,3147699-3147770,3148239-3148325,
           3148418-3148522,3149028-3149085,3149576-3149634,
           3149960-3150056,3150217-3150317,3150443-3150487,
           3150619-3150681,3151082-3151147,3151286-3151342,
           3151570-3151656,3152063-3152239,3152413-3152625
          Length = 624

 Score = 29.9 bits (64), Expect = 0.64
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 77  NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 175
           N  +I H+D GKST    L+   G + KR +++
Sbjct: 79  NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111


>01_06_0662 + 30987187-30987277,30987825-30990214
          Length = 826

 Score = 29.9 bits (64), Expect = 0.64
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +2

Query: 53  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 148
           M K+    N+ V+ HVD GKST T  L+   G
Sbjct: 13  MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44


>02_04_0148 - 20198407-20201424
          Length = 1005

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 77  NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 199
           N  ++ HVD GK++   HLI   G  ++R  E+    A+ M
Sbjct: 18  NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57


>06_01_0325 -
           2366193-2366367,2367063-2367122,2367323-2367463,
           2368175-2368288,2368444-2368475,2368736-2368793,
           2369263-2369434,2369584-2370334,2370743-2371036
          Length = 598

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 77  NIVVIGHVDSGKSTTTGHLIYKCGGIDK 160
           N  +I HVD GKST    L+   G I K
Sbjct: 59  NFSIIAHVDHGKSTLADRLLELTGTIKK 86


>04_03_0106 +
           11325172-11325379,11326590-11326640,11326987-11327073,
           11327276-11327373
          Length = 147

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 65  KTHINIVVIGHVDSG 109
           K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118


>04_04_0214 -
           23674270-23676858,23677574-23680843,23680941-23681119,
           23681200-23681559,23681645-23682086,23682199-23682332,
           23682479-23682680
          Length = 2391

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 198 WVKDPSNMLGYWTN*RLSVAWYHNR 272
           W+  PS+ +GYW N  +S   + N+
Sbjct: 876 WISSPSSGVGYWGNSEMSQRTFFNQ 900


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +2

Query: 158 KRTIEKFEKEAQEMGK 205
           KR  EK EKEAQEMG+
Sbjct: 371 KRKEEKREKEAQEMGR 386


>02_05_0564 + 30003817-30005778
          Length = 653

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 161 VCQYHHICRSSDQWWW 114
           V  Y H+C    +WWW
Sbjct: 564 VLTYMHLCAEDWRWWW 579


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,457,915
Number of Sequences: 37544
Number of extensions: 179105
Number of successful extensions: 446
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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